RNA–Protein interactions for RNA: ENST00000562638.5

TCF4-215, Transcript of transcription factor 4, humanhuman

TSL 1 (best)

Gene TCF4, Length 401 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF4-215ENST00000562638 EP400Q96L91 3159 aa2.72□□□□□ -1.97
TCF4-215ENST00000562638 CHD9Q3L8U1 2897 aa2.72□□□□□ -1.97
TCF4-215ENST00000562638 CELSR2Q9HCU4 2923 aa2.72□□□□□ -1.97
TCF4-215ENST00000562638 DCHS1Q96JQ0 3298 aa2.71□□□□□ -1.98
TCF4-215ENST00000562638 VCANP13611 3396 aa2.71□□□□□ -1.98
TCF4-215ENST00000562638 COX6B2Q6YFQ2 88 aa2.71□□□□□ -1.98
TCF4-215ENST00000562638 HTTP42858 3142 aa2.71□□□□□ -1.98
TCF4-215ENST00000562638 TRANK1O15050 2925 aa2.71□□□□□ -1.98
TCF4-215ENST00000562638 PRO2289Q9P1D8 64 aa2.7□□□□□ -1.98
TCF4-215ENST00000562638 ACACAQ13085 2346 aa2.7□□□□□ -1.98
TCF4-215ENST00000562638 BRCA2P51587 3418 aa2.7□□□□□ -1.98
TCF4-215ENST00000562638 AKAP6Q13023 2319 aa2.69□□□□□ -1.98
TCF4-215ENST00000562638 NCOR1O75376 2440 aa2.69□□□□□ -1.98
TCF4-215ENST00000562638 WDFY3Q8IZQ1 3526 aa2.69□□□□□ -1.98
TCF4-215ENST00000562638 SPEGQ15772 3267 aa2.69□□□□□ -1.98
TCF4-215ENST00000562638 APC2O95996 2303 aa2.69□□□□□ -1.98
TCF4-215ENST00000562638 SPENQ96T58 3664 aaKnown RBP2.69□□□□□ -1.98
TCF4-215ENST00000562638 ITPR1Q14643 2758 aa2.68□□□□□ -1.98
TCF4-215ENST00000562638 TACC2O95359 2948 aa2.68□□□□□ -1.98
TCF4-215ENST00000562638 DMXL2Q8TDJ6 3036 aa2.68□□□□□ -1.98
TCF4-215ENST00000562638 DEFB130BP0DP73 79 aa2.68□□□□□ -1.98
TCF4-215ENST00000562638 DEFB130AP0DP74 79 aa2.68□□□□□ -1.98
TCF4-215ENST00000562638 AKAP9Q99996 3911 aa2.68□□□□□ -1.98
TCF4-215ENST00000562638 PTPRZ1P23471 2315 aaPredicted RBP2.68□□□□□ -1.98
TCF4-215ENST00000562638 C5orf42Q9H799 3197 aa2.67□□□□□ -1.98
TCF4-215ENST00000562638 C2CD3Q4AC94 2353 aa2.67□□□□□ -1.98
TCF4-215ENST00000562638 LY6EQ16553 131 aa2.67□□□□□ -1.98
TCF4-215ENST00000562638 C10orf99Q6UWK7 81 aa2.67□□□□□ -1.98
TCF4-215ENST00000562638 RP1L1Q8IWN7 2480 aaPredicted RBP2.67□□□□□ -1.98
TCF4-215ENST00000562638 ZFHX4Q86UP3 3567 aa2.67□□□□□ -1.98
TCF4-215ENST00000562638 SPTBN4Q9H254 2564 aa2.66□□□□□ -1.98
TCF4-215ENST00000562638 ROS1P08922 2347 aa2.66□□□□□ -1.98
TCF4-215ENST00000562638 EP300Q09472 2414 aaPredicted RBP2.66□□□□□ -1.98
TCF4-215ENST00000562638 C10orf95Q9H7T3 257 aa2.65□□□□□ -1.99
TCF4-215ENST00000562638 SPTA1P02549 2419 aa2.65□□□□□ -1.99
TCF4-215ENST00000562638 ZFHX2Q9C0A1 2572 aaPredicted RBP2.65□□□□□ -1.99
TCF4-215ENST00000562638 FLG2Q5D862 2391 aaPredicted RBP2.65□□□□□ -1.99
TCF4-215ENST00000562638 LRBAP50851 2863 aa2.64□□□□□ -1.99
TCF4-215ENST00000562638 ZDBF2Q9HCK1 2354 aa2.64□□□□□ -1.99
TCF4-215ENST00000562638 COL12A1Q99715 3063 aa2.64□□□□□ -1.99
TCF4-215ENST00000562638 KRTAP23-1A1A580 65 aa2.64□□□□□ -1.99
TCF4-215ENST00000562638 RPL37P61927 97 aaKnown RBP2.64□□□□□ -1.99
TCF4-215ENST00000562638 CDH23Q9H251 3354 aa2.63□□□□□ -1.99
TCF4-215ENST00000562638 CSMD1Q96PZ7 3565 aa2.63□□□□□ -1.99
TCF4-215ENST00000562638 A0A096LPF7 62 aa2.63□□□□□ -1.99
TCF4-215ENST00000562638 TYMSOSQ8TAI1 123 aa2.63□□□□□ -1.99
TCF4-215ENST00000562638 PLAC4Q8WY50 150 aa2.62□□□□□ -1.99
TCF4-215ENST00000562638 CELSR1Q9NYQ6 3014 aa2.62□□□□□ -1.99
TCF4-215ENST00000562638 SMG1Q96Q15 3661 aaKnown RBP2.61□□□□□ -1.99
TCF4-215ENST00000562638 SPACA4Q8TDM5 124 aa2.61□□□□□ -1.99
TCF4-215ENST00000562638 GVINP1Q7Z2Y8 2422 aa2.61□□□□□ -1.99
TCF4-215ENST00000562638 PRLHP81277 87 aa2.6□□□□□ -1.99
TCF4-215ENST00000562638 Q6ZRN7 208 aaPredicted RBP2.6□□□□□ -1.99
TCF4-215ENST00000562638 KRTAP13-1Q8IUC0 172 aa2.6□□□□□ -1.99
TCF4-215ENST00000562638 NOTCH3Q9UM47 2321 aa2.6□□□□□ -1.99
TCF4-215ENST00000562638 NF1P21359 2839 aa2.6□□□□□ -1.99
TCF4-215ENST00000562638 C14orf177Q52M58 125 aa2.59□□□□□ -1.99
TCF4-215ENST00000562638 LOC400499M0QZD8 3231 aa2.59□□□□□ -1.99
TCF4-215ENST00000562638 CRYBG3Q68DQ2 2970 aa2.58□□□□□ -2
TCF4-215ENST00000562638 ATMQ13315 3056 aa2.58□□□□□ -2
TCF4-215ENST00000562638 ABCA2Q9BZC7 2435 aa2.58□□□□□ -2
TCF4-215ENST00000562638 DCHS2Q6V1P9 2916 aa2.58□□□□□ -2
TCF4-215ENST00000562638 FBN1P35555 2871 aaKnown RBP2.58□□□□□ -2
TCF4-215ENST00000562638 REV3LO60673 3130 aa2.57□□□□□ -2
TCF4-215ENST00000562638 CELSR3Q9NYQ7 3312 aa2.57□□□□□ -2
TCF4-215ENST00000562638 PRRC2CQ9Y520 2896 aaKnown RBP2.57□□□□□ -2
TCF4-215ENST00000562638 NCOR2Q9Y618 2525 aa2.57□□□□□ -2
TCF4-215ENST00000562638 H3BNG1 76 aa2.57□□□□□ -2
TCF4-215ENST00000562638 NBPF19A0A087WUL8 3843 aa2.57□□□□□ -2
TCF4-215ENST00000562638 LINC01556Q5JQF7 62 aa2.56□□□□□ -2
TCF4-215ENST00000562638 LAMA5O15230 3695 aa2.56□□□□□ -2
TCF4-215ENST00000562638 A0A1W2PPR1 153 aa2.55□□□□□ -2
TCF4-215ENST00000562638 INE1O15225 51 aa2.55□□□□□ -2
TCF4-215ENST00000562638 UBR5O95071 2799 aaPredicted RBP2.55□□□□□ -2
TCF4-215ENST00000562638 DMXL1Q9Y485 3027 aa2.55□□□□□ -2
TCF4-215ENST00000562638 VWFP04275 2813 aa2.55□□□□□ -2
TCF4-215ENST00000562638 CACNA1HO95180 2353 aa2.54□□□□□ -2
TCF4-215ENST00000562638 DEFB123Q8N688 67 aa2.54□□□□□ -2
TCF4-215ENST00000562638 R4GN34 69 aa2.54□□□□□ -2
TCF4-215ENST00000562638 CREBBPQ92793 2442 aa2.54□□□□□ -2
TCF4-215ENST00000562638 DNAH1Q9P2D7 4330 aa2.54□□□□□ -2
TCF4-215ENST00000562638 APCP25054 2843 aa2.53□□□□□ -2
TCF4-215ENST00000562638 SPINK1P00995 79 aa2.53□□□□□ -2
TCF4-215ENST00000562638 HRNRQ86YZ3 2850 aaPredicted RBP2.53□□□□□ -2
TCF4-215ENST00000562638 VPS13DQ5THJ4 4388 aa2.52□□□□□ -2.01
TCF4-215ENST00000562638 ANKHD1Q8IWZ3 2542 aaKnown RBP2.52□□□□□ -2.01
TCF4-215ENST00000562638 RIF1Q5UIP0 2472 aaKnown RBP2.52□□□□□ -2.01
TCF4-215ENST00000562638 KRTAP10-8P60410 259 aa2.51□□□□□ -2.01
TCF4-215ENST00000562638 KRTAP10-9P60411 292 aa2.51□□□□□ -2.01
TCF4-215ENST00000562638 S4R3F8 94 aa2.51□□□□□ -2.01
TCF4-215ENST00000562638 SPG11Q96JI7 2443 aa2.51□□□□□ -2.01
TCF4-215ENST00000562638 A0A096LNI7 61 aa2.5□□□□□ -2.01
TCF4-215ENST00000562638 KRTAP10-6P60371 365 aaPredicted RBP2.5□□□□□ -2.01
TCF4-215ENST00000562638 DEFB124Q8NES8 71 aa2.5□□□□□ -2.01
TCF4-215ENST00000562638 SETXQ7Z333 2677 aaKnown RBP2.5□□□□□ -2.01
TCF4-215ENST00000562638 SPRR5A0A1B0GTR4 108 aa2.49□□□□□ -2.01
TCF4-215ENST00000562638 SPART-AS1P0CW21 52 aa2.49□□□□□ -2.01
TCF4-215ENST00000562638 KRTAP12-2P59991 146 aa2.49□□□□□ -2.01
TCF4-215ENST00000562638 KRTAP13-4Q3LI77 160 aa2.49□□□□□ -2.01
TCF4-215ENST00000562638 ASPMQ8IZT6 3477 aa2.49□□□□□ -2.01
Retrieved 100 of 20,778 RNA–protein pairs in 117.9 ms