RNA–Protein interactions for RNA: ENST00000560307.5

SNRPA1-209, Transcript of small nuclear ribonucleoprotein polypeptide A', humanhuman

TSL 2

Gene SNRPA1, Length 433 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1-209ENST00000560307 MMP24-AS1A0A0U1RRL7 71 aa3.7□□□□□ -1.82
SNRPA1-209ENST00000560307 A8MU10 97 aa3.7□□□□□ -1.82
SNRPA1-209ENST00000560307 H0Y9J4 135 aa3.7□□□□□ -1.82
SNRPA1-209ENST00000560307 DEFB4AO15263 64 aa3.7□□□□□ -1.82
SNRPA1-209ENST00000560307 DNAH10OSP0CZ25 163 aa3.7□□□□□ -1.82
SNRPA1-209ENST00000560307 Q6ZR54 194 aa3.7□□□□□ -1.82
SNRPA1-209ENST00000560307 NOTCH2NLQ7Z3S9 236 aa3.7□□□□□ -1.82
SNRPA1-209ENST00000560307 LINC00472Q9H8W2 130 aa3.7□□□□□ -1.82
SNRPA1-209ENST00000560307 ZFHX3Q15911 3703 aa3.7□□□□□ -1.82
SNRPA1-209ENST00000560307 GVINP1Q7Z2Y8 2422 aa3.69□□□□□ -1.82
SNRPA1-209ENST00000560307 DEFB131BA0A096LNP1 70 aa3.69□□□□□ -1.82
SNRPA1-209ENST00000560307 ATRXP46100 2492 aa3.69□□□□□ -1.82
SNRPA1-209ENST00000560307 CEP295Q9C0D2 2601 aa3.68□□□□□ -1.82
SNRPA1-209ENST00000560307 KRTAP7-1Q8IUC3 87 aa3.68□□□□□ -1.82
SNRPA1-209ENST00000560307 MUC3AQ02505 3323 aa3.67□□□□□ -1.82
SNRPA1-209ENST00000560307 CRYBG3Q68DQ2 2970 aa3.67□□□□□ -1.82
SNRPA1-209ENST00000560307 KRTAP10-3P60369 221 aa3.67□□□□□ -1.82
SNRPA1-209ENST00000560307 C2CD3Q4AC94 2353 aa3.67□□□□□ -1.82
SNRPA1-209ENST00000560307 DOPEY1Q5JWR5 2465 aa3.66□□□□□ -1.82
SNRPA1-209ENST00000560307 RPL37AP61513 92 aaKnown RBP3.66□□□□□ -1.82
SNRPA1-209ENST00000560307 SETXQ7Z333 2677 aaKnown RBP3.66□□□□□ -1.82
SNRPA1-209ENST00000560307 FAM168BA1KXE4 195 aa3.65□□□□□ -1.83
SNRPA1-209ENST00000560307 C8orf87E5RJ46 101 aa3.65□□□□□ -1.83
SNRPA1-209ENST00000560307 DEFB116Q30KQ4 102 aa3.65□□□□□ -1.83
SNRPA1-209ENST00000560307 ANKRD17O75179 2603 aaKnown RBP3.65□□□□□ -1.83
SNRPA1-209ENST00000560307 AKAP9Q99996 3911 aa3.64□□□□□ -1.83
SNRPA1-209ENST00000560307 COL12A1Q99715 3063 aa3.64□□□□□ -1.83
SNRPA1-209ENST00000560307 PRB2P02812 416 aaPredicted RBP3.64□□□□□ -1.83
SNRPA1-209ENST00000560307 CHD6Q8TD26 2715 aa3.64□□□□□ -1.83
SNRPA1-209ENST00000560307 ZFHX2Q9C0A1 2572 aaPredicted RBP3.63□□□□□ -1.83
SNRPA1-209ENST00000560307 RELNP78509 3460 aa3.63□□□□□ -1.83
SNRPA1-209ENST00000560307 VPS13CQ709C8 3753 aa3.63□□□□□ -1.83
SNRPA1-209ENST00000560307 IGKV2-24A0A0C4DH68 120 aa3.63□□□□□ -1.83
SNRPA1-209ENST00000560307 HRES1P13985 223 aa3.63□□□□□ -1.83
SNRPA1-209ENST00000560307 C8orf17Q9NRJ1 99 aa3.63□□□□□ -1.83
SNRPA1-209ENST00000560307 MXRA5Q9NR99 2828 aa3.63□□□□□ -1.83
SNRPA1-209ENST00000560307 RIF1Q5UIP0 2472 aaKnown RBP3.63□□□□□ -1.83
SNRPA1-209ENST00000560307 LAMA5O15230 3695 aa3.63□□□□□ -1.83
SNRPA1-209ENST00000560307 NBASA2RRP1 2371 aa3.62□□□□□ -1.83
SNRPA1-209ENST00000560307 SPINK7P58062 85 aa3.62□□□□□ -1.83
SNRPA1-209ENST00000560307 SPAG11AQ6PDA7 123 aa3.62□□□□□ -1.83
SNRPA1-209ENST00000560307 ANK3Q12955 4377 aaKnown RBP3.61□□□□□ -1.83
SNRPA1-209ENST00000560307 NCOR2Q9Y618 2525 aa3.61□□□□□ -1.83
SNRPA1-209ENST00000560307 PCOTHQ58A44 107 aa3.61□□□□□ -1.83
SNRPA1-209ENST00000560307 SVEP1Q4LDE5 3571 aa3.61□□□□□ -1.83
SNRPA1-209ENST00000560307 CELSR2Q9HCU4 2923 aa3.61□□□□□ -1.83
SNRPA1-209ENST00000560307 MUC6Q6W4X9 2439 aa3.61□□□□□ -1.83
SNRPA1-209ENST00000560307 TLN2Q9Y4G6 2542 aa3.61□□□□□ -1.83
SNRPA1-209ENST00000560307 A0A1B0GVX0 72 aa3.6□□□□□ -1.83
SNRPA1-209ENST00000560307 LINC00313P59037 77 aa3.6□□□□□ -1.83
SNRPA1-209ENST00000560307 PRLHP81277 87 aa3.6□□□□□ -1.83
SNRPA1-209ENST00000560307 Q96NJ1 140 aa3.6□□□□□ -1.83
SNRPA1-209ENST00000560307 MRPL34Q9BQ48 92 aaKnown RBP3.6□□□□□ -1.83
SNRPA1-209ENST00000560307 IGF2RP11717 2491 aa3.6□□□□□ -1.83
SNRPA1-209ENST00000560307 TTC28Q96AY4 2481 aa3.6□□□□□ -1.83
SNRPA1-209ENST00000560307 A0A0G2JQZ4 141 aa3.59□□□□□ -1.83
SNRPA1-209ENST00000560307 A0A1W2PNN7 141 aa3.59□□□□□ -1.83
SNRPA1-209ENST00000560307 NDUFAF8A1L188 74 aa3.59□□□□□ -1.83
SNRPA1-209ENST00000560307 ACYP2P14621 99 aa3.59□□□□□ -1.83
SNRPA1-209ENST00000560307 C14orf177Q52M58 125 aa3.59□□□□□ -1.83
SNRPA1-209ENST00000560307 LINC01554Q52M75 96 aa3.59□□□□□ -1.83
SNRPA1-209ENST00000560307 SPATA8Q6RVD6 105 aa3.59□□□□□ -1.83
SNRPA1-209ENST00000560307 RTL8CO15255 209 aa3.58□□□□□ -1.84
SNRPA1-209ENST00000560307 NBPF19A0A087WUL8 3843 aa3.58□□□□□ -1.84
SNRPA1-209ENST00000560307 A0A096LNI7 61 aa3.57□□□□□ -1.84
SNRPA1-209ENST00000560307 KRTAP24-1Q3LI83 254 aa3.57□□□□□ -1.84
SNRPA1-209ENST00000560307 LINC00483Q53H64 154 aa3.57□□□□□ -1.84
SNRPA1-209ENST00000560307 KRTAP13-1Q8IUC0 172 aa3.57□□□□□ -1.84
SNRPA1-209ENST00000560307 DNAH1Q9P2D7 4330 aa3.57□□□□□ -1.84
SNRPA1-209ENST00000560307 FBN2P35556 2912 aa3.57□□□□□ -1.84
SNRPA1-209ENST00000560307 MYO9AB2RTY4 2548 aa3.56□□□□□ -1.84
SNRPA1-209ENST00000560307 SPG11Q96JI7 2443 aa3.56□□□□□ -1.84
SNRPA1-209ENST00000560307 ALMS1Q8TCU4 4167 aa3.56□□□□□ -1.84
SNRPA1-209ENST00000560307 ITPR1Q14643 2758 aa3.56□□□□□ -1.84
SNRPA1-209ENST00000560307 KRTAP13-3Q3SY46 172 aa3.56□□□□□ -1.84
SNRPA1-209ENST00000560307 CASC10Q5T4H9 136 aa3.56□□□□□ -1.84
SNRPA1-209ENST00000560307 DMAC1Q96GE9 116 aa3.56□□□□□ -1.84
SNRPA1-209ENST00000560307 ZNF706Q9Y5V0 76 aaPredicted RBP3.56□□□□□ -1.84
SNRPA1-209ENST00000560307 JMJD1CQ15652 2540 aa3.56□□□□□ -1.84
SNRPA1-209ENST00000560307 RETNLBQ9BQ08 111 aa3.55□□□□□ -1.84
SNRPA1-209ENST00000560307 ZANQ9Y493 2812 aa3.55□□□□□ -1.84
SNRPA1-209ENST00000560307 UTP20O75691 2785 aaKnown RBP3.55□□□□□ -1.84
SNRPA1-209ENST00000560307 TEX15Q9BXT5 2789 aa3.54□□□□□ -1.84
SNRPA1-209ENST00000560307 A0A1B0GU69 56 aa3.54□□□□□ -1.84
SNRPA1-209ENST00000560307 PTPN13Q12923 2485 aa3.54□□□□□ -1.84
SNRPA1-209ENST00000560307 UQCR11O14957 56 aa3.53□□□□□ -1.84
SNRPA1-209ENST00000560307 USP9YO00507 2555 aaPredicted RBP3.53□□□□□ -1.85
SNRPA1-209ENST00000560307 APCP25054 2843 aa3.52□□□□□ -1.85
SNRPA1-209ENST00000560307 USP9XQ93008 2570 aaPredicted RBP3.52□□□□□ -1.85
SNRPA1-209ENST00000560307 IGHV6-1A0A0B4J1U7 121 aa3.52□□□□□ -1.85
SNRPA1-209ENST00000560307 MIR22HGQ0VDD5 57 aa3.52□□□□□ -1.85
SNRPA1-209ENST00000560307 FN1P02751 2386 aaKnown RBP3.52□□□□□ -1.85
SNRPA1-209ENST00000560307 NAV2Q8IVL1 2488 aa3.5□□□□□ -1.85
SNRPA1-209ENST00000560307 UBR5O95071 2799 aaPredicted RBP3.5□□□□□ -1.85
SNRPA1-209ENST00000560307 EPG5Q9HCE0 2579 aa3.5□□□□□ -1.85
SNRPA1-209ENST00000560307 CHTF8P0CG12 524 aa3.5□□□□□ -1.85
SNRPA1-209ENST00000560307 GCN1Q92616 2671 aaKnown RBP3.5□□□□□ -1.85
SNRPA1-209ENST00000560307 LRRK2Q5S007 2527 aa3.49□□□□□ -1.85
SNRPA1-209ENST00000560307 ITPR3Q14573 2671 aa3.49□□□□□ -1.85
SNRPA1-209ENST00000560307 KRTAP11-1Q8IUC1 163 aa3.49□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 85.7 ms