RNA–Protein interactions for RNA: ENST00000560029.5

CRNDE-208, Transcript of colorectal neoplasia differentially expressed, humanhuman

TSL 2

Gene CRNDE, Length 659 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CRNDE-208ENST00000560029 PRLHP81277 87 aa1.77□□□□□ -2.13
CRNDE-208ENST00000560029 KRTAP13-4Q3LI77 160 aa1.77□□□□□ -2.13
CRNDE-208ENST00000560029 KRTAP26-1Q6PEX3 210 aa1.77□□□□□ -2.13
CRNDE-208ENST00000560029 SSBP3-AS1Q7Z2R9 100 aa1.77□□□□□ -2.13
CRNDE-208ENST00000560029 EP400Q96L91 3159 aa1.77□□□□□ -2.13
CRNDE-208ENST00000560029 SORL1Q92673 2214 aa1.76□□□□□ -2.13
CRNDE-208ENST00000560029 SPTBN2O15020 2390 aa1.76□□□□□ -2.13
CRNDE-208ENST00000560029 A0A096LNI7 61 aa1.75□□□□□ -2.13
CRNDE-208ENST00000560029 DEFB4AO15263 64 aa1.75□□□□□ -2.13
CRNDE-208ENST00000560029 LY6G6CO95867 125 aa1.75□□□□□ -2.13
CRNDE-208ENST00000560029 SPRR1BP22528 89 aa1.75□□□□□ -2.13
CRNDE-208ENST00000560029 PLCE1Q9P212 2302 aa1.74□□□□□ -2.13
CRNDE-208ENST00000560029 DEFB135Q30KP9 77 aa1.74□□□□□ -2.13
CRNDE-208ENST00000560029 COL6A3P12111 3177 aa1.74□□□□□ -2.13
CRNDE-208ENST00000560029 SZT2Q5T011 3432 aa1.74□□□□□ -2.13
CRNDE-208ENST00000560029 CEP350Q5VT06 3117 aa1.74□□□□□ -2.13
CRNDE-208ENST00000560029 AHCTF1Q8WYP5 2266 aa1.74□□□□□ -2.13
CRNDE-208ENST00000560029 UTRNP46939 3433 aa1.73□□□□□ -2.13
CRNDE-208ENST00000560029 SPTBN1Q01082 2364 aaKnown RBP1.73□□□□□ -2.13
CRNDE-208ENST00000560029 PKDREJQ9NTG1 2253 aa1.72□□□□□ -2.13
CRNDE-208ENST00000560029 H3BNG1 76 aa1.72□□□□□ -2.13
CRNDE-208ENST00000560029 SPINK1P00995 79 aa1.72□□□□□ -2.13
CRNDE-208ENST00000560029 LINC01556Q5JQF7 62 aa1.72□□□□□ -2.13
CRNDE-208ENST00000560029 Q96NJ1 140 aa1.72□□□□□ -2.13
CRNDE-208ENST00000560029 WNK2Q9Y3S1 2297 aa1.71□□□□□ -2.13
CRNDE-208ENST00000560029 UNC80Q8N2C7 3258 aa1.71□□□□□ -2.14
CRNDE-208ENST00000560029 A0A087WTM6 91 aa1.71□□□□□ -2.14
CRNDE-208ENST00000560029 K7EIL1 84 aa1.71□□□□□ -2.14
CRNDE-208ENST00000560029 SPINK6Q6UWN8 80 aa1.71□□□□□ -2.14
CRNDE-208ENST00000560029 CRIPTQ9P021 101 aa1.71□□□□□ -2.14
CRNDE-208ENST00000560029 CEP250Q9BV73 2442 aa1.71□□□□□ -2.14
CRNDE-208ENST00000560029 CUL9Q8IWT3 2517 aa1.71□□□□□ -2.14
CRNDE-208ENST00000560029 SDK1Q7Z5N4 2213 aa1.7□□□□□ -2.14
CRNDE-208ENST00000560029 FAM186AA6NE01 2351 aa1.7□□□□□ -2.14
CRNDE-208ENST00000560029 WNK1Q9H4A3 2382 aa1.7□□□□□ -2.14
CRNDE-208ENST00000560029 MAP1BP46821 2468 aaKnown RBP1.69□□□□□ -2.14
CRNDE-208ENST00000560029 H0YAA0 97 aa1.69□□□□□ -2.14
CRNDE-208ENST00000560029 H1FX-AS1Q4G0G2 97 aa1.69□□□□□ -2.14
CRNDE-208ENST00000560029 ZZEF1O43149 2961 aa1.69□□□□□ -2.14
CRNDE-208ENST00000560029 Q6ZSA8 131 aa1.68□□□□□ -2.14
CRNDE-208ENST00000560029 PTPRZ1P23471 2315 aaPredicted RBP1.67□□□□□ -2.14
CRNDE-208ENST00000560029 MUC6Q6W4X9 2439 aa1.67□□□□□ -2.14
CRNDE-208ENST00000560029 CACNA1BQ00975 2339 aa1.66□□□□□ -2.14
CRNDE-208ENST00000560029 NBDYA0A0U1RRE5 68 aa1.66□□□□□ -2.14
CRNDE-208ENST00000560029 TPRXLQ17RH7 258 aa1.66□□□□□ -2.14
CRNDE-208ENST00000560029 C5orf42Q9H799 3197 aa1.66□□□□□ -2.14
CRNDE-208ENST00000560029 DNAH14Q0VDD8 3507 aa1.65□□□□□ -2.14
CRNDE-208ENST00000560029 RANBP2P49792 3224 aaKnown RBP1.65□□□□□ -2.14
CRNDE-208ENST00000560029 HTTP42858 3142 aa1.65□□□□□ -2.14
CRNDE-208ENST00000560029 KMT2BQ9UMN6 2715 aaPredicted RBP1.65□□□□□ -2.15
CRNDE-208ENST00000560029 RPL37P61927 97 aaKnown RBP1.65□□□□□ -2.15
CRNDE-208ENST00000560029 CHD9Q3L8U1 2897 aa1.65□□□□□ -2.15
CRNDE-208ENST00000560029 EP300Q09472 2414 aaPredicted RBP1.65□□□□□ -2.15
CRNDE-208ENST00000560029 TRANK1O15050 2925 aa1.64□□□□□ -2.15
CRNDE-208ENST00000560029 CHD7Q9P2D1 2997 aa1.64□□□□□ -2.15
CRNDE-208ENST00000560029 ABCA2Q9BZC7 2435 aa1.64□□□□□ -2.15
CRNDE-208ENST00000560029 COL6A6A6NMZ7 2263 aa1.64□□□□□ -2.15
CRNDE-208ENST00000560029 ROS1P08922 2347 aa1.63□□□□□ -2.15
CRNDE-208ENST00000560029 CFAP47Q6ZTR5 3102 aa1.63□□□□□ -2.15
CRNDE-208ENST00000560029 COX6B2Q6YFQ2 88 aa1.63□□□□□ -2.15
CRNDE-208ENST00000560029 PRO2289Q9P1D8 64 aa1.63□□□□□ -2.15
CRNDE-208ENST00000560029 CFAP54Q96N23 3096 aa1.63□□□□□ -2.15
CRNDE-208ENST00000560029 XIRP2A4UGR9 3374 aa1.63□□□□□ -2.15
CRNDE-208ENST00000560029 MGAQ8IWI9 3026 aa1.62□□□□□ -2.15
CRNDE-208ENST00000560029 VPS13AQ96RL7 3174 aa1.62□□□□□ -2.15
CRNDE-208ENST00000560029 UBE2DNLQ8IWF7 75 aa1.62□□□□□ -2.15
CRNDE-208ENST00000560029 CNOT1A5YKK6 2376 aaKnown RBP1.62□□□□□ -2.15
CRNDE-208ENST00000560029 MKI67P46013 3256 aaKnown RBP1.62□□□□□ -2.15
CRNDE-208ENST00000560029 ALMS1Q8TCU4 4167 aa1.62□□□□□ -2.15
CRNDE-208ENST00000560029 NBEAQ8NFP9 2946 aa1.61□□□□□ -2.15
CRNDE-208ENST00000560029 APC2O95996 2303 aa1.61□□□□□ -2.15
CRNDE-208ENST00000560029 PCNX1Q96RV3 2341 aa1.61□□□□□ -2.15
CRNDE-208ENST00000560029 FRYLO94915 3013 aa1.61□□□□□ -2.15
CRNDE-208ENST00000560029 DEFB123Q8N688 67 aa1.61□□□□□ -2.15
CRNDE-208ENST00000560029 C10orf95Q9H7T3 257 aa1.61□□□□□ -2.15
CRNDE-208ENST00000560029 APLNQ9ULZ1 77 aa1.61□□□□□ -2.15
CRNDE-208ENST00000560029 RP1L1Q8IWN7 2480 aaPredicted RBP1.61□□□□□ -2.15
CRNDE-208ENST00000560029 PIEZO2Q9H5I5 2752 aa1.6□□□□□ -2.15
CRNDE-208ENST00000560029 DCHS1Q96JQ0 3298 aa1.6□□□□□ -2.15
CRNDE-208ENST00000560029 A0A0D9SG42 100 aa1.6□□□□□ -2.15
CRNDE-208ENST00000560029 SPTBN5Q9NRC6 3674 aaKnown RBP1.6□□□□□ -2.15
CRNDE-208ENST00000560029 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP1.6□□□□□ -2.151e-7■□□□□ 11
CRNDE-208ENST00000560029 TPRP12270 2363 aaKnown RBP1.59□□□□□ -2.15
CRNDE-208ENST00000560029 ANKHD1Q8IWZ3 2542 aaKnown RBP1.59□□□□□ -2.15
CRNDE-208ENST00000560029 WDFY4Q6ZS81 3184 aa1.59□□□□□ -2.15
CRNDE-208ENST00000560029 KRTAP21-3Q3LHN1 58 aa1.59□□□□□ -2.15
CRNDE-208ENST00000560029 Q6ZRN7 208 aaPredicted RBP1.59□□□□□ -2.15
CRNDE-208ENST00000560029 SPACA4Q8TDM5 124 aa1.59□□□□□ -2.15
CRNDE-208ENST00000560029 CHD6Q8TD26 2715 aa1.59□□□□□ -2.16
CRNDE-208ENST00000560029 TNRC18O15417 2968 aaPredicted RBP1.59□□□□□ -2.16
CRNDE-208ENST00000560029 TRIOO75962 3097 aa1.58□□□□□ -2.16
CRNDE-208ENST00000560029 BRCA2P51587 3418 aa1.58□□□□□ -2.16
CRNDE-208ENST00000560029 USP34Q70CQ2 3546 aa1.58□□□□□ -2.16
CRNDE-208ENST00000560029 FRYQ5TBA9 3013 aa1.58□□□□□ -2.16
CRNDE-208ENST00000560029 PLAC4Q8WY50 150 aa1.58□□□□□ -2.16
CRNDE-208ENST00000560029 AKAP6Q13023 2319 aa1.58□□□□□ -2.16
CRNDE-208ENST00000560029 WDFY3Q8IZQ1 3526 aa1.57□□□□□ -2.16
CRNDE-208ENST00000560029 LAMA3Q16787 3333 aa1.57□□□□□ -2.16
CRNDE-208ENST00000560029 CACNA1HO95180 2353 aa1.57□□□□□ -2.16
CRNDE-208ENST00000560029 KALRNO60229 2985 aa1.56□□□□□ -2.16
Retrieved 100 of 20,778 RNA–protein pairs in 71.2 ms