RNA–Protein interactions for RNA: ENST00000559485.2

RGPD1-204, Transcript of RANBP2-like and GRIP domain containing 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene RGPD1, Length 5,247 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RGPD1-204ENST00000559485 GPR179Q6PRD1 2367 aa1.43□□□□□ -2.18
RGPD1-204ENST00000559485 CHD9Q3L8U1 2897 aa1.43□□□□□ -2.18
RGPD1-204ENST00000559485 ADM2Q7Z4H4 148 aa1.43□□□□□ -2.18
RGPD1-204ENST00000559485 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP1.43□□□□□ -2.18
RGPD1-204ENST00000559485 DOPEY2Q9Y3R5 2298 aa1.43□□□□□ -2.18
RGPD1-204ENST00000559485 DCHS2Q6V1P9 2916 aa1.42□□□□□ -2.18
RGPD1-204ENST00000559485 CADP27708 2225 aa1.42□□□□□ -2.18
RGPD1-204ENST00000559485 SVILO95425 2214 aa1.42□□□□□ -2.18
RGPD1-204ENST00000559485 A0A1W2PNN7 141 aa1.42□□□□□ -2.18
RGPD1-204ENST00000559485 A8MU10 97 aa1.42□□□□□ -2.18
RGPD1-204ENST00000559485 KRTAP10-11P60412 298 aa1.42□□□□□ -2.18
RGPD1-204ENST00000559485 APC2O95996 2303 aa1.42□□□□□ -2.18
RGPD1-204ENST00000559485 KRTAP11-1Q8IUC1 163 aa1.42□□□□□ -2.18
RGPD1-204ENST00000559485 LINC00304Q8N9R0 145 aa1.42□□□□□ -2.18
RGPD1-204ENST00000559485 WDR87Q6ZQQ6 2873 aa1.41□□□□□ -2.18
RGPD1-204ENST00000559485 PLCE1Q9P212 2302 aa1.41□□□□□ -2.18
RGPD1-204ENST00000559485 NDUFAF8A1L188 74 aa1.41□□□□□ -2.18
RGPD1-204ENST00000559485 KRTAP24-1Q3LI83 254 aa1.41□□□□□ -2.18
RGPD1-204ENST00000559485 XP32Q5T750 250 aa1.41□□□□□ -2.18
RGPD1-204ENST00000559485 APLNQ9ULZ1 77 aa1.41□□□□□ -2.18
RGPD1-204ENST00000559485 TRANK1O15050 2925 aa1.41□□□□□ -2.18
RGPD1-204ENST00000559485 ZNF469Q96JG9 3925 aaPredicted RBP1.41□□□□□ -2.18
RGPD1-204ENST00000559485 POLEQ07864 2286 aa1.41□□□□□ -2.18
RGPD1-204ENST00000559485 PSORS1C2Q9UIG4 136 aa1.41□□□□□ -2.18
RGPD1-204ENST00000559485 Q96NJ1 140 aa1.4□□□□□ -2.18
RGPD1-204ENST00000559485 ASH1LQ9NR48 2969 aaKnown RBP1.4□□□□□ -2.19
RGPD1-204ENST00000559485 PLAC4Q8WY50 150 aa1.4□□□□□ -2.19
RGPD1-204ENST00000559485 COL12A1Q99715 3063 aa1.4□□□□□ -2.19
RGPD1-204ENST00000559485 ABCA4P78363 2273 aa1.4□□□□□ -2.19
RGPD1-204ENST00000559485 SPACA4Q8TDM5 124 aa1.4□□□□□ -2.19
RGPD1-204ENST00000559485 KRTAP4-11Q9BYQ6 195 aa1.4□□□□□ -2.19
RGPD1-204ENST00000559485 PKD1L2Q7Z442 2459 aa1.4□□□□□ -2.19
RGPD1-204ENST00000559485 NBDYA0A0U1RRE5 68 aa1.39□□□□□ -2.19
RGPD1-204ENST00000559485 KRTAP13-1Q8IUC0 172 aa1.39□□□□□ -2.19
RGPD1-204ENST00000559485 KRTAP4-5Q9BYR2 181 aa1.39□□□□□ -2.19
RGPD1-204ENST00000559485 RPS29P62273 56 aaKnown RBP1.39□□□□□ -2.19
RGPD1-204ENST00000559485 ANKHD1Q8IWZ3 2542 aaKnown RBP1.39□□□□□ -2.19
RGPD1-204ENST00000559485 PP632Q6XCG6 107 aa1.39□□□□□ -2.19
RGPD1-204ENST00000559485 CR1P17927 2039 aa1.39□□□□□ -2.19
RGPD1-204ENST00000559485 SPTBN1Q01082 2364 aaKnown RBP1.38□□□□□ -2.19
RGPD1-204ENST00000559485 PKDREJQ9NTG1 2253 aa1.38□□□□□ -2.19
RGPD1-204ENST00000559485 A0A087WTM6 91 aa1.38□□□□□ -2.19
RGPD1-204ENST00000559485 K7EIL1 84 aa1.38□□□□□ -2.19
RGPD1-204ENST00000559485 LYSTQ99698 3801 aa1.38□□□□□ -2.19
RGPD1-204ENST00000559485 WWC2-AS2Q96NR7 200 aa1.38□□□□□ -2.19
RGPD1-204ENST00000559485 TRRAPQ9Y4A5 3859 aa1.38□□□□□ -2.19
RGPD1-204ENST00000559485 KRTAP7-1Q8IUC3 87 aa1.38□□□□□ -2.19
RGPD1-204ENST00000559485 AKAP6Q13023 2319 aa1.38□□□□□ -2.19
RGPD1-204ENST00000559485 ABCA1O95477 2261 aa1.37□□□□□ -2.19
RGPD1-204ENST00000559485 TACC2O95359 2948 aa1.37□□□□□ -2.19
RGPD1-204ENST00000559485 PTPRQQ9UMZ3 2332 aa1.37□□□□□ -2.19
RGPD1-204ENST00000559485 SPTBN2O15020 2390 aa1.37□□□□□ -2.19
RGPD1-204ENST00000559485 FAM186AA6NE01 2351 aa1.37□□□□□ -2.19
RGPD1-204ENST00000559485 DSPP15924 2871 aaKnown RBP1.36□□□□□ -2.19
RGPD1-204ENST00000559485 S4R3F8 94 aa1.36□□□□□ -2.19
RGPD1-204ENST00000559485 ZFHX2Q9C0A1 2572 aaPredicted RBP1.36□□□□□ -2.19
RGPD1-204ENST00000559485 PTPRZ1P23471 2315 aaPredicted RBP1.36□□□□□ -2.19
RGPD1-204ENST00000559485 KRTAP21-3Q3LHN1 58 aa1.36□□□□□ -2.19
RGPD1-204ENST00000559485 EP300Q09472 2414 aaPredicted RBP1.36□□□□□ -2.19
RGPD1-204ENST00000559485 CRYBG3Q68DQ2 2970 aa1.36□□□□□ -2.19
RGPD1-204ENST00000559485 KRTAP15-1Q3LI76 137 aa1.36□□□□□ -2.19
RGPD1-204ENST00000559485 KRTAP13-3Q3SY46 172 aa1.36□□□□□ -2.19
RGPD1-204ENST00000559485 WNK1Q9H4A3 2382 aa1.36□□□□□ -2.19
RGPD1-204ENST00000559485 M0QZ58 72 aa1.36□□□□□ -2.19
RGPD1-204ENST00000559485 ANK2Q01484 3957 aa1.36□□□□□ -2.19
RGPD1-204ENST00000559485 INE1O15225 51 aa1.35□□□□□ -2.19
RGPD1-204ENST00000559485 Q8N1X5 172 aa1.35□□□□□ -2.19
RGPD1-204ENST00000559485 TYMSOSQ8TAI1 123 aa1.35□□□□□ -2.19
RGPD1-204ENST00000559485 CELSR2Q9HCU4 2923 aa1.35□□□□□ -2.19
RGPD1-204ENST00000559485 ACACAQ13085 2346 aa1.35□□□□□ -2.19
RGPD1-204ENST00000559485 P0C880 135 aa1.35□□□□□ -2.19
RGPD1-204ENST00000559485 CNOT1A5YKK6 2376 aaKnown RBP1.35□□□□□ -2.19
RGPD1-204ENST00000559485 LRBAP50851 2863 aa1.35□□□□□ -2.19
RGPD1-204ENST00000559485 H0YAA0 97 aa1.34□□□□□ -2.19
RGPD1-204ENST00000559485 CACNA1HO95180 2353 aa1.34□□□□□ -2.19
RGPD1-204ENST00000559485 ABCA2Q9BZC7 2435 aa1.34□□□□□ -2.19
RGPD1-204ENST00000559485 AKAP13Q12802 2813 aa1.34□□□□□ -2.19
RGPD1-204ENST00000559485 Q6ZSA8 131 aa1.34□□□□□ -2.19
RGPD1-204ENST00000559485 MED13LQ71F56 2210 aa1.34□□□□□ -2.2
RGPD1-204ENST00000559485 COL6A6A6NMZ7 2263 aa1.34□□□□□ -2.2
RGPD1-204ENST00000559485 CEP250Q9BV73 2442 aa1.34□□□□□ -2.2
RGPD1-204ENST00000559485 A0A0D9SG42 100 aa1.33□□□□□ -2.2
RGPD1-204ENST00000559485 WNK2Q9Y3S1 2297 aa1.33□□□□□ -2.2
RGPD1-204ENST00000559485 ROS1P08922 2347 aa1.33□□□□□ -2.2
RGPD1-204ENST00000559485 MUC6Q6W4X9 2439 aa1.33□□□□□ -2.2
RGPD1-204ENST00000559485 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP1.33□□□□□ -2.2
RGPD1-204ENST00000559485 PCNX1Q96RV3 2341 aa1.33□□□□□ -2.2
RGPD1-204ENST00000559485 COL7A1Q02388 2944 aa1.33□□□□□ -2.2
RGPD1-204ENST00000559485 ANK3Q12955 4377 aaKnown RBP1.33□□□□□ -2.2
RGPD1-204ENST00000559485 NOTCH3Q9UM47 2321 aa1.33□□□□□ -2.2
RGPD1-204ENST00000559485 PKHD1L1Q86WI1 4243 aa1.32□□□□□ -2.2
RGPD1-204ENST00000559485 KRTAP23-1A1A580 65 aa1.32□□□□□ -2.2
RGPD1-204ENST00000559485 SPTA1P02549 2419 aa1.32□□□□□ -2.2
RGPD1-204ENST00000559485 Q6ZRN7 208 aaPredicted RBP1.31□□□□□ -2.2
RGPD1-204ENST00000559485 GVINP1Q7Z2Y8 2422 aa1.31□□□□□ -2.2
RGPD1-204ENST00000559485 PRO2289Q9P1D8 64 aa1.31□□□□□ -2.2
RGPD1-204ENST00000559485 PIEZO2Q9H5I5 2752 aa1.31□□□□□ -2.2
RGPD1-204ENST00000559485 KRTAP1-5Q9BYS1 174 aa1.31□□□□□ -2.2
RGPD1-204ENST00000559485 DOPEY1Q5JWR5 2465 aa1.3□□□□□ -2.2
RGPD1-204ENST00000559485 FBN1P35555 2871 aaKnown RBP1.29□□□□□ -2.2
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms