RNA–Protein interactions for RNA: ENST00000557703.5

SHMT2-234, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 4

Gene SHMT2, Length 542 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-234ENST00000557703 PSMB2P49721 201 aa7.94□□□□□ -1.14
SHMT2-234ENST00000557703 C9orf153Q5TBE3 101 aa7.94□□□□□ -1.14
SHMT2-234ENST00000557703 Q8N377 158 aa7.94□□□□□ -1.14
SHMT2-234ENST00000557703 F8WEM9 126 aa7.92□□□□□ -1.14
SHMT2-234ENST00000557703 TSPAN13O95857 204 aa7.92□□□□□ -1.14
SHMT2-234ENST00000557703 CD164Q04900 197 aa7.92□□□□□ -1.14
SHMT2-234ENST00000557703 SMIM29Q86T20 159 aa7.92□□□□□ -1.14
SHMT2-234ENST00000557703 K7ERJ3 54 aa7.91□□□□□ -1.14
SHMT2-234ENST00000557703 SNHG12Q9BXW3 62 aa7.91□□□□□ -1.14
SHMT2-234ENST00000557703 DNAL4O96015 105 aa7.9□□□□□ -1.14
SHMT2-234ENST00000557703 Q6JHZ5 121 aa7.9□□□□□ -1.14
SHMT2-234ENST00000557703 IGLV8-61A0A075B6I0 122 aa7.89□□□□□ -1.15
SHMT2-234ENST00000557703 SCGB1C2P0DMR2 95 aa7.88□□□□□ -1.15
SHMT2-234ENST00000557703 FAM218AQ96MZ4 157 aa7.88□□□□□ -1.15
SHMT2-234ENST00000557703 TRACP01848 142 aa7.87□□□□□ -1.15
SHMT2-234ENST00000557703 LYRM7Q5U5X0 104 aa7.87□□□□□ -1.15
SHMT2-234ENST00000557703 LIMD2Q9BT23 127 aa7.87□□□□□ -1.15
SHMT2-234ENST00000557703 TMEM256-PLSCR3K7ERE1 68 aa7.86□□□□□ -1.15
SHMT2-234ENST00000557703 FP248Q71RG6 208 aaPredicted RBP7.86□□□□□ -1.15
SHMT2-234ENST00000557703 Q5XG85 94 aa7.85□□□□□ -1.15
SHMT2-234ENST00000557703 ORMDL1Q9P0S3 153 aa7.85□□□□□ -1.15
SHMT2-234ENST00000557703 UBR4Q5T4S7 5183 aa7.84□□□□□ -1.15
SHMT2-234ENST00000557703 CLEC2BQ92478 149 aa7.84□□□□□ -1.15
SHMT2-234ENST00000557703 LST1O00453 97 aa7.83□□□□□ -1.16
SHMT2-234ENST00000557703 NDUFV3P56181 108 aaKnown RBP7.82□□□□□ -1.16
SHMT2-234ENST00000557703 PRR4Q16378 134 aa7.82□□□□□ -1.16
SHMT2-234ENST00000557703 TRBV20-1A0A075B6N2 111 aa7.81□□□□□ -1.16
SHMT2-234ENST00000557703 FABP2P12104 132 aa7.8□□□□□ -1.16
SHMT2-234ENST00000557703 UBE2V1Q13404 147 aa7.8□□□□□ -1.16
SHMT2-234ENST00000557703 ATXN8Q156A1 80 aa7.8□□□□□ -1.16
SHMT2-234ENST00000557703 HMCN2Q8NDA2 5059 aa7.79□□□□□ -1.16
SHMT2-234ENST00000557703 BATFQ16520 125 aa7.79□□□□□ -1.16
SHMT2-234ENST00000557703 TCL1BO95988 128 aa7.78□□□□□ -1.16
SHMT2-234ENST00000557703 Q6Q795 121 aa7.78□□□□□ -1.16
SHMT2-234ENST00000557703 IGLV7-46A0A075B6I9 117 aa7.77□□□□□ -1.17
SHMT2-234ENST00000557703 H3BMG7 143 aa7.77□□□□□ -1.17
SHMT2-234ENST00000557703 TPRXLQ17RH7 258 aa7.77□□□□□ -1.17
SHMT2-234ENST00000557703 IGFL1Q6UW32 110 aa7.77□□□□□ -1.17
SHMT2-234ENST00000557703 C9orf118A6NHY6 69 aa7.76□□□□□ -1.17
SHMT2-234ENST00000557703 ASB16-AS1Q495Z4 193 aa7.75□□□□□ -1.17
SHMT2-234ENST00000557703 TEN1Q86WV5 123 aa7.75□□□□□ -1.17
SHMT2-234ENST00000557703 HRCT1Q6UXD1 115 aa7.74□□□□□ -1.17
SHMT2-234ENST00000557703 RETNLBQ9BQ08 111 aa7.74□□□□□ -1.17
SHMT2-234ENST00000557703 TRBV7-7A0A0K0K1E9 115 aa7.73□□□□□ -1.17
SHMT2-234ENST00000557703 H3BUT2 72 aa7.73□□□□□ -1.17
SHMT2-234ENST00000557703 BAALC-AS2P0C853 105 aa7.73□□□□□ -1.17
SHMT2-234ENST00000557703 COL5A1-AS1Q5SY13 56 aa7.73□□□□□ -1.17
SHMT2-234ENST00000557703 SS18L2Q9UHA2 77 aa7.73□□□□□ -1.17
SHMT2-234ENST00000557703 PCP4L1A6NKN8 68 aa7.72□□□□□ -1.17
SHMT2-234ENST00000557703 TAX1BP3O14907 124 aa7.72□□□□□ -1.17
SHMT2-234ENST00000557703 C21orf62-AS1Q17RA5 79 aa7.71□□□□□ -1.18
SHMT2-234ENST00000557703 ANKRD29Q8N6D5 301 aa7.71□□□□□ -1.18
SHMT2-234ENST00000557703 A0A1W2PPM0 123 aa7.7□□□□□ -1.18
SHMT2-234ENST00000557703 RBM3P98179 157 aaKnown RBP7.7□□□□□ -1.18
SHMT2-234ENST00000557703 TRBV7-4A0A0J9YYF1 115 aa7.69□□□□□ -1.18
SHMT2-234ENST00000557703 JMJD7-PLA2G4BH0Y9G9 81 aa7.69□□□□□ -1.18
SHMT2-234ENST00000557703 NAA38Q9BRA0 125 aaKnown RBP7.69□□□□□ -1.18
SHMT2-234ENST00000557703 LRP2P98164 4655 aa7.69□□□□□ -1.18
SHMT2-234ENST00000557703 PDE6GP18545 87 aa7.68□□□□□ -1.18
SHMT2-234ENST00000557703 DSCR8Q96T75 97 aa7.68□□□□□ -1.18
SHMT2-234ENST00000557703 A0A0G2JQZ4 141 aa7.67□□□□□ -1.18
SHMT2-234ENST00000557703 C1orf195Q5TG92 126 aa7.67□□□□□ -1.18
SHMT2-234ENST00000557703 A0A1B0GW54 56 aa7.66□□□□□ -1.18
SHMT2-234ENST00000557703 CDIP1Q9H305 208 aa7.66□□□□□ -1.18
SHMT2-234ENST00000557703 KRTAP13-3Q3SY46 172 aa7.65□□□□□ -1.18
SHMT2-234ENST00000557703 C9JAW5 83 aa7.64□□□□□ -1.19
SHMT2-234ENST00000557703 H3BT86 120 aa7.64□□□□□ -1.19
SHMT2-234ENST00000557703 A0A1W2PNM2 257 aa7.62□□□□□ -1.19
SHMT2-234ENST00000557703 CCKP06307 115 aa7.62□□□□□ -1.19
SHMT2-234ENST00000557703 A0A087WSZ3 146 aa7.61□□□□□ -1.19
SHMT2-234ENST00000557703 SPCS1Q9Y6A9 102 aa7.61□□□□□ -1.19
SHMT2-234ENST00000557703 LOC110117498A0A087WWA1 95 aa7.6□□□□□ -1.19
SHMT2-234ENST00000557703 LPAP08519 4548 aa7.59□□□□□ -1.19
SHMT2-234ENST00000557703 OBSCN-AS1Q96MR7 158 aa7.59□□□□□ -1.19
SHMT2-234ENST00000557703 GTF2H5Q6ZYL4 71 aa7.56□□□□□ -1.2
SHMT2-234ENST00000557703 XP32Q5T750 250 aa7.55□□□□□ -1.2
SHMT2-234ENST00000557703 Q6ZQT0 140 aa7.55□□□□□ -1.2
SHMT2-234ENST00000557703 A0A1B0GV72 72 aa7.54□□□□□ -1.2
SHMT2-234ENST00000557703 K7EP34 96 aa7.54□□□□□ -1.2
SHMT2-234ENST00000557703 SEC61BP60468 96 aaKnown RBP7.53□□□□□ -1.2
SHMT2-234ENST00000557703 VPS25Q9BRG1 176 aa7.53□□□□□ -1.2
SHMT2-234ENST00000557703 Q96NJ1 140 aa7.51□□□□□ -1.21
SHMT2-234ENST00000557703 J3KT08 172 aa7.5□□□□□ -1.21
SHMT2-234ENST00000557703 LINC00472Q9H8W2 130 aa7.5□□□□□ -1.21
SHMT2-234ENST00000557703 C14orf132Q9NPU4 83 aa7.5□□□□□ -1.21
SHMT2-234ENST00000557703 F8W1H4 67 aa7.49□□□□□ -1.21
SHMT2-234ENST00000557703 C9orf92A6NGG3 77 aa7.46□□□□□ -1.22
SHMT2-234ENST00000557703 IGKV4-1P06312 121 aa7.46□□□□□ -1.22
SHMT2-234ENST00000557703 PRO0461Q9UI25 63 aa7.46□□□□□ -1.22
SHMT2-234ENST00000557703 MTURNQ8N3F0 131 aa7.45□□□□□ -1.22
SHMT2-234ENST00000557703 SMCPP49901 116 aaPredicted RBP7.44□□□□□ -1.22
SHMT2-234ENST00000557703 SIGMAR1Q99720 223 aa7.44□□□□□ -1.22
SHMT2-234ENST00000557703 NDUFB1O75438 58 aa7.42□□□□□ -1.22
SHMT2-234ENST00000557703 NREPQ16612 68 aa7.42□□□□□ -1.22
SHMT2-234ENST00000557703 A0A0U1RQV1 116 aa7.41□□□□□ -1.22
SHMT2-234ENST00000557703 LINC00313P59037 77 aa7.41□□□□□ -1.22
SHMT2-234ENST00000557703 RPL37P61927 97 aaKnown RBP7.41□□□□□ -1.22
SHMT2-234ENST00000557703 Q75L30 129 aa7.41□□□□□ -1.22
SHMT2-234ENST00000557703 C8orf87E5RJ46 101 aa7.4□□□□□ -1.22
SHMT2-234ENST00000557703 RNF213Q63HN8 5207 aa7.39□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 7.4 ms