RNA–Protein interactions for RNA: ENST00000557026.5

NEK9-210, Transcript of NIMA related kinase 9, humanhuman

TSL 2

Gene NEK9, Length 5,177 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK9-210ENST00000557026 KRTAP1-5Q9BYS1 174 aa7.16□□□□□ -1.26
NEK9-210ENST00000557026 PLAC4Q8WY50 150 aa7.15□□□□□ -1.27
NEK9-210ENST00000557026 ITPR3Q14573 2671 aa7.14□□□□□ -1.27
NEK9-210ENST00000557026 WDR87Q6ZQQ6 2873 aa7.13□□□□□ -1.27
NEK9-210ENST00000557026 KRTAP10-2P60368 255 aa7.12□□□□□ -1.27
NEK9-210ENST00000557026 Q5XG85 94 aa7.12□□□□□ -1.27
NEK9-210ENST00000557026 MAST4O15021 2626 aa7.09□□□□□ -1.27
NEK9-210ENST00000557026 STAB1Q9NY15 2570 aa7.09□□□□□ -1.28
NEK9-210ENST00000557026 Q8N9P0 234 aaPredicted RBP7.08□□□□□ -1.28
NEK9-210ENST00000557026 ATRQ13535 2644 aa7.08□□□□□ -1.28
NEK9-210ENST00000557026 RPL37P61927 97 aaKnown RBP7.07□□□□□ -1.28
NEK9-210ENST00000557026 KRTAP4-16G5E9R7 235 aaPredicted RBP7.04□□□□□ -1.28
NEK9-210ENST00000557026 H1FX-AS1Q4G0G2 97 aa7.02□□□□□ -1.29
NEK9-210ENST00000557026 M0QZ58 72 aa7.01□□□□□ -1.29
NEK9-210ENST00000557026 Q8NDZ9 215 aa6.99□□□□□ -1.29
NEK9-210ENST00000557026 Q6ZRN7 208 aaPredicted RBP6.99□□□□□ -1.29
NEK9-210ENST00000557026 PANO1I0J062 215 aa6.95□□□□□ -1.3
NEK9-210ENST00000557026 CEP350Q5VT06 3117 aa6.94□□□□□ -1.3
NEK9-210ENST00000557026 A0A0A0MQY5 61 aa6.94□□□□□ -1.3
NEK9-210ENST00000557026 CFAP46Q8IYW2 2715 aa6.94□□□□□ -1.3
NEK9-210ENST00000557026 ROMO1P60602 79 aa6.94□□□□□ -1.3
NEK9-210ENST00000557026 PCNTO95613 3336 aa6.91□□□□□ -1.3
NEK9-210ENST00000557026 KRTAP29-1A8MX34 341 aaPredicted RBP6.91□□□□□ -1.3
NEK9-210ENST00000557026 A0A087X002 238 aa6.88□□□□□ -1.31
NEK9-210ENST00000557026 ADM2Q7Z4H4 148 aa6.87□□□□□ -1.31
NEK9-210ENST00000557026 KRTAP13-1Q8IUC0 172 aa6.82□□□□□ -1.32
NEK9-210ENST00000557026 Q5VV11 94 aa6.8□□□□□ -1.32
NEK9-210ENST00000557026 BAHCC1Q9P281 2608 aa6.8□□□□□ -1.32
NEK9-210ENST00000557026 UNC79Q9P2D8 2635 aa6.79□□□□□ -1.32
NEK9-210ENST00000557026 KMT2BQ9UMN6 2715 aaPredicted RBP6.78□□□□□ -1.32
NEK9-210ENST00000557026 H3BS24 57 aa6.78□□□□□ -1.32
NEK9-210ENST00000557026 TEP1Q99973 2627 aaKnown RBP6.76□□□□□ -1.33
NEK9-210ENST00000557026 NOTCH2NLQ7Z3S9 236 aa6.76□□□□□ -1.33
NEK9-210ENST00000557026 FLG2Q5D862 2391 aaPredicted RBP6.76□□□□□ -1.33
NEK9-210ENST00000557026 A8MUU9 505 aa6.76□□□□□ -1.33
NEK9-210ENST00000557026 C20orf166-AS1Q96NR2 134 aa6.76□□□□□ -1.33
NEK9-210ENST00000557026 COL6A5A8TX70 2615 aa6.75□□□□□ -1.33
NEK9-210ENST00000557026 KRTAP13-2Q52LG2 175 aa6.73□□□□□ -1.33
NEK9-210ENST00000557026 SPATA8Q6RVD6 105 aa6.71□□□□□ -1.33
NEK9-210ENST00000557026 SETXQ7Z333 2677 aaKnown RBP6.71□□□□□ -1.33
NEK9-210ENST00000557026 NBEAL1Q6ZS30 2694 aa6.68□□□□□ -1.34
NEK9-210ENST00000557026 CENPFP49454 3210 aa6.66□□□□□ -1.34
NEK9-210ENST00000557026 TNP1P09430 55 aa6.65□□□□□ -1.34
NEK9-210ENST00000557026 NSD1Q96L73 2696 aaPredicted RBP6.65□□□□□ -1.34
NEK9-210ENST00000557026 TPRXLQ17RH7 258 aa6.65□□□□□ -1.34
NEK9-210ENST00000557026 BPTFQ12830 3046 aa6.65□□□□□ -1.35
NEK9-210ENST00000557026 ZNF292O60281 2723 aa6.64□□□□□ -1.35
NEK9-210ENST00000557026 TEX15Q9BXT5 2789 aa6.64□□□□□ -1.35
NEK9-210ENST00000557026 DMBT1Q9UGM3 2413 aaPredicted RBP6.61□□□□□ -1.35
NEK9-210ENST00000557026 PP632Q6XCG6 107 aa6.6□□□□□ -1.35
NEK9-210ENST00000557026 HTTP42858 3142 aa6.59□□□□□ -1.35
NEK9-210ENST00000557026 KRTAP11-1Q8IUC1 163 aa6.59□□□□□ -1.35
NEK9-210ENST00000557026 KRTAP7-1Q8IUC3 87 aa6.59□□□□□ -1.35
NEK9-210ENST00000557026 BRCA2P51587 3418 aa6.59□□□□□ -1.35
NEK9-210ENST00000557026 MAP1AP78559 2803 aaPredicted RBP6.54□□□□□ -1.36
NEK9-210ENST00000557026 TNRC18O15417 2968 aaPredicted RBP6.54□□□□□ -1.36
NEK9-210ENST00000557026 PRO2289Q9P1D8 64 aa6.53□□□□□ -1.36
NEK9-210ENST00000557026 MKI67P46013 3256 aaKnown RBP6.51□□□□□ -1.37
NEK9-210ENST00000557026 IGSF10Q6WRI0 2623 aa6.51□□□□□ -1.37
NEK9-210ENST00000557026 PRAC1Q96KF2 57 aa6.5□□□□□ -1.37
NEK9-210ENST00000557026 XP32Q5T750 250 aa6.49□□□□□ -1.37
NEK9-210ENST00000557026 NOTCH1P46531 2555 aa6.49□□□□□ -1.37
NEK9-210ENST00000557026 CYSTM1Q9H1C7 97 aa6.47□□□□□ -1.37
NEK9-210ENST00000557026 KRTAP1-4P0C5Y4 121 aa6.46□□□□□ -1.37
NEK9-210ENST00000557026 ITPR2Q14571 2701 aa6.46□□□□□ -1.38
NEK9-210ENST00000557026 CENPEQ02224 2701 aa6.45□□□□□ -1.38
NEK9-210ENST00000557026 CHD6Q8TD26 2715 aa6.44□□□□□ -1.38
NEK9-210ENST00000557026 GCN1Q92616 2671 aaKnown RBP6.43□□□□□ -1.38
NEK9-210ENST00000557026 KRTAP25-1Q3LHN0 102 aa6.43□□□□□ -1.38
NEK9-210ENST00000557026 PRRC2CQ9Y520 2896 aaKnown RBP6.41□□□□□ -1.38
NEK9-210ENST00000557026 AKAP13Q12802 2813 aa6.4□□□□□ -1.39
NEK9-210ENST00000557026 LAMA2P24043 3122 aaKnown RBP6.4□□□□□ -1.39
NEK9-210ENST00000557026 STAB2Q8WWQ8 2551 aa6.4□□□□□ -1.39
NEK9-210ENST00000557026 RANBP2P49792 3224 aaKnown RBP6.35□□□□□ -1.39
NEK9-210ENST00000557026 KRTAP13-3Q3SY46 172 aa6.34□□□□□ -1.39
NEK9-210ENST00000557026 DNAH12Q6ZR08 3092 aa6.33□□□□□ -1.4
NEK9-210ENST00000557026 SZT2Q5T011 3432 aa6.33□□□□□ -1.4
NEK9-210ENST00000557026 KRTAP10-8P60410 259 aa6.31□□□□□ -1.4
NEK9-210ENST00000557026 A6NN06 94 aa6.3□□□□□ -1.4
NEK9-210ENST00000557026 A8MU10 97 aa6.3□□□□□ -1.4
NEK9-210ENST00000557026 KRTAP10-10P60014 251 aa6.3□□□□□ -1.4
NEK9-210ENST00000557026 LAMA3Q16787 3333 aa6.29□□□□□ -1.4
NEK9-210ENST00000557026 A0A1B0GVY2 172 aa6.29□□□□□ -1.4
NEK9-210ENST00000557026 UBR5O95071 2799 aaPredicted RBP6.27□□□□□ -1.41
NEK9-210ENST00000557026 EYSQ5T1H1 3165 aa6.27□□□□□ -1.41
NEK9-210ENST00000557026 REV3LO60673 3130 aa6.26□□□□□ -1.41
NEK9-210ENST00000557026 MUC3AQ02505 3323 aa6.25□□□□□ -1.41
NEK9-210ENST00000557026 COL6A3P12111 3177 aa6.23□□□□□ -1.41
NEK9-210ENST00000557026 PRUNE2Q8WUY3 3088 aa6.23□□□□□ -1.41
NEK9-210ENST00000557026 KRTAP16-1A8MUX0 517 aa6.23□□□□□ -1.41
NEK9-210ENST00000557026 CHD9Q3L8U1 2897 aa6.22□□□□□ -1.41
NEK9-210ENST00000557026 CDH23Q9H251 3354 aa6.21□□□□□ -1.42
NEK9-210ENST00000557026 HIVEP1P15822 2718 aa6.19□□□□□ -1.42
NEK9-210ENST00000557026 SPTBN5Q9NRC6 3674 aaKnown RBP6.19□□□□□ -1.42
NEK9-210ENST00000557026 UNC80Q8N2C7 3258 aa6.16□□□□□ -1.42
NEK9-210ENST00000557026 VCANP13611 3396 aa6.16□□□□□ -1.42
NEK9-210ENST00000557026 TENM4Q6N022 2769 aa6.16□□□□□ -1.42
NEK9-210ENST00000557026 TRANK1O15050 2925 aa6.15□□□□□ -1.42
NEK9-210ENST00000557026 A0A0C4DFX4 3053 aa6.15□□□□□ -1.42
NEK9-210ENST00000557026 C10orf95Q9H7T3 257 aa6.13□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 70.8 ms