RNA–Protein interactions for RNA: ENST00000556992.1

SRP54-212, Transcript of signal recognition particle 54, humanhuman

TSL 2

Gene SRP54, Length 529 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-212ENST00000556992 C22orf24Q9Y442 160 aa2.84□□□□□ -1.95
SRP54-212ENST00000556992 LRCOL1A6NCL2 159 aa2.83□□□□□ -1.96
SRP54-212ENST00000556992 SCGB1A1P11684 91 aa2.83□□□□□ -1.96
SRP54-212ENST00000556992 MRPL55Q7Z7F7 128 aaKnown RBP2.83□□□□□ -1.96
SRP54-212ENST00000556992 C9orf163Q8N9P6 203 aa2.83□□□□□ -1.96
SRP54-212ENST00000556992 DPH3Q96FX2 82 aa2.83□□□□□ -1.96
SRP54-212ENST00000556992 DYNC1H1Q14204 4646 aaKnown RBP2.82□□□□□ -1.96
SRP54-212ENST00000556992 ETDCA0A1B0GVM5 59 aa2.82□□□□□ -1.96
SRP54-212ENST00000556992 CCKP06307 115 aa2.82□□□□□ -1.96
SRP54-212ENST00000556992 RBM3P98179 157 aaKnown RBP2.82□□□□□ -1.96
SRP54-212ENST00000556992 GAGE2AQ6NT46 116 aa2.82□□□□□ -1.96
SRP54-212ENST00000556992 SDIM1Q6ZPB5 146 aa2.82□□□□□ -1.96
SRP54-212ENST00000556992 Q6ZQY7 126 aa2.82□□□□□ -1.96
SRP54-212ENST00000556992 Q6ZR54 194 aa2.82□□□□□ -1.96
SRP54-212ENST00000556992 Q6ZRN7 208 aaPredicted RBP2.82□□□□□ -1.96
SRP54-212ENST00000556992 LAMTOR3Q9UHA4 124 aa2.82□□□□□ -1.96
SRP54-212ENST00000556992 A0A087WTM6 91 aa2.81□□□□□ -1.96
SRP54-212ENST00000556992 LOC110117498A0A087WWA1 95 aa2.81□□□□□ -1.96
SRP54-212ENST00000556992 FAM168BA1KXE4 195 aa2.81□□□□□ -1.96
SRP54-212ENST00000556992 RPL37AP8A6NKH3 93 aa2.81□□□□□ -1.96
SRP54-212ENST00000556992 C3orf84H3BNL1 204 aa2.81□□□□□ -1.96
SRP54-212ENST00000556992 M0R2N4 97 aa2.81□□□□□ -1.96
SRP54-212ENST00000556992 SPRR1AP35321 89 aa2.81□□□□□ -1.96
SRP54-212ENST00000556992 C1orf134Q5TEV5 83 aa2.81□□□□□ -1.96
SRP54-212ENST00000556992 REG3GQ6UW15 175 aa2.81□□□□□ -1.96
SRP54-212ENST00000556992 FAM19A5Q7Z5A7 132 aaPredicted RBP2.81□□□□□ -1.96
SRP54-212ENST00000556992 LINC00643Q86TS7 51 aa2.81□□□□□ -1.96
SRP54-212ENST00000556992 DSCR8Q96T75 97 aa2.81□□□□□ -1.96
SRP54-212ENST00000556992 C14orf132Q9NPU4 83 aa2.81□□□□□ -1.96
SRP54-212ENST00000556992 FAT2Q9NYQ8 4349 aa2.8□□□□□ -1.96
SRP54-212ENST00000556992 ALMS1Q8TCU4 4167 aa2.8□□□□□ -1.96
SRP54-212ENST00000556992 PKHD1P08F94 4074 aa2.8□□□□□ -1.96
SRP54-212ENST00000556992 IGLV2-33A0A075B6J2 118 aaPredicted RBP2.8□□□□□ -1.96
SRP54-212ENST00000556992 A0A096LNI7 61 aa2.8□□□□□ -1.96
SRP54-212ENST00000556992 IGKV2-24A0A0C4DH68 120 aa2.8□□□□□ -1.96
SRP54-212ENST00000556992 A0A1W2PNN7 141 aa2.8□□□□□ -1.96
SRP54-212ENST00000556992 KRTAP4-16G5E9R7 235 aaPredicted RBP2.8□□□□□ -1.96
SRP54-212ENST00000556992 XGP55808 180 aa2.8□□□□□ -1.96
SRP54-212ENST00000556992 NDUFV3P56181 108 aaKnown RBP2.8□□□□□ -1.96
SRP54-212ENST00000556992 Q6ZRX8 168 aa2.8□□□□□ -1.96
SRP54-212ENST00000556992 DNAH11Q96DT5 4516 aa2.8□□□□□ -1.96
SRP54-212ENST00000556992 VPS13DQ5THJ4 4388 aa2.8□□□□□ -1.96
SRP54-212ENST00000556992 DNAH2Q9P225 4427 aa2.79□□□□□ -1.96
SRP54-212ENST00000556992 KMT2AQ03164 3969 aa2.79□□□□□ -1.96
SRP54-212ENST00000556992 H0Y9J4 135 aa2.79□□□□□ -1.96
SRP54-212ENST00000556992 LY6G6CO95867 125 aa2.79□□□□□ -1.96
SRP54-212ENST00000556992 MT-ATP8P03928 68 aa2.79□□□□□ -1.96
SRP54-212ENST00000556992 KRTAP10-8P60410 259 aa2.79□□□□□ -1.96
SRP54-212ENST00000556992 Q6Q795 121 aa2.79□□□□□ -1.96
SRP54-212ENST00000556992 IMUPQ9GZP8 106 aa2.79□□□□□ -1.96
SRP54-212ENST00000556992 A0A1B0GW54 56 aa2.78□□□□□ -1.96
SRP54-212ENST00000556992 EPM2AB3EWF7 344 aa2.78□□□□□ -1.96
SRP54-212ENST00000556992 DSCR10P59022 87 aa2.78□□□□□ -1.96
SRP54-212ENST00000556992 UBE2BP63146 152 aa2.78□□□□□ -1.96
SRP54-212ENST00000556992 Q6ZQT0 140 aa2.78□□□□□ -1.96
SRP54-212ENST00000556992 DEFB105AQ8NG35 78 aa2.78□□□□□ -1.96
SRP54-212ENST00000556992 UBL5Q9BZL1 73 aa2.78□□□□□ -1.96
SRP54-212ENST00000556992 IGLV5-48A0A075B6I7 105 aa2.77□□□□□ -1.97
SRP54-212ENST00000556992 TRBV7-7A0A0K0K1E9 115 aa2.77□□□□□ -1.97
SRP54-212ENST00000556992 RTL8CO15255 209 aa2.77□□□□□ -1.97
SRP54-212ENST00000556992 KRTAP12-2P59991 146 aa2.77□□□□□ -1.97
SRP54-212ENST00000556992 Q8N377 158 aa2.77□□□□□ -1.97
SRP54-212ENST00000556992 Q9BRP9 147 aa2.77□□□□□ -1.97
SRP54-212ENST00000556992 LINC00846Q9NV44 126 aa2.77□□□□□ -1.97
SRP54-212ENST00000556992 HSPG2P98160 4391 aa2.77□□□□□ -1.97
SRP54-212ENST00000556992 TRBV7-4A0A0J9YYF1 115 aa2.76□□□□□ -1.97
SRP54-212ENST00000556992 A0A1B0GV72 72 aa2.76□□□□□ -1.97
SRP54-212ENST00000556992 KRTAP16-1A8MUX0 517 aa2.76□□□□□ -1.97
SRP54-212ENST00000556992 BCE1O60756 84 aa2.76□□□□□ -1.97
SRP54-212ENST00000556992 CHTF8P0CG12 524 aa2.76□□□□□ -1.97
SRP54-212ENST00000556992 ATP5EP2Q5VTU8 51 aa2.76□□□□□ -1.97
SRP54-212ENST00000556992 Q6JHZ5 121 aa2.76□□□□□ -1.97
SRP54-212ENST00000556992 PHF5AQ7RTV0 110 aaKnown RBP2.76□□□□□ -1.97
SRP54-212ENST00000556992 FAM19A1Q7Z5A9 133 aa2.76□□□□□ -1.97
SRP54-212ENST00000556992 SPACA4Q8TDM5 124 aa2.76□□□□□ -1.97
SRP54-212ENST00000556992 SMCR5Q8TEV8 140 aa2.76□□□□□ -1.97
SRP54-212ENST00000556992 DNAH17Q9UFH2 4485 aa2.76□□□□□ -1.97
SRP54-212ENST00000556992 F8WEM9 126 aa2.75□□□□□ -1.97
SRP54-212ENST00000556992 ERC2-IT1O76042 136 aa2.75□□□□□ -1.97
SRP54-212ENST00000556992 FUSP35637 526 aaKnown RBP eCLIP2.75□□□□□ -1.97
SRP54-212ENST00000556992 UBE2AP49459 152 aa2.75□□□□□ -1.97
SRP54-212ENST00000556992 ST20-AS1Q8NBB2 130 aa2.75□□□□□ -1.97
SRP54-212ENST00000556992 HIGD2AQ9BW72 106 aa2.75□□□□□ -1.97
SRP54-212ENST00000556992 PLAC8Q9NZF1 115 aa2.75□□□□□ -1.97
SRP54-212ENST00000556992 KRTAP13-3Q3SY46 172 aa2.74□□□□□ -1.97
SRP54-212ENST00000556992 IGLV8-61A0A075B6I0 122 aa2.73□□□□□ -1.97
SRP54-212ENST00000556992 PANO1I0J062 215 aa2.73□□□□□ -1.97
SRP54-212ENST00000556992 SPRR1BP22528 89 aa2.73□□□□□ -1.97
SRP54-212ENST00000556992 CXCL6P80162 114 aa2.73□□□□□ -1.97
SRP54-212ENST00000556992 HAMPP81172 84 aa2.73□□□□□ -1.97
SRP54-212ENST00000556992 PRLHP81277 87 aa2.73□□□□□ -1.97
SRP54-212ENST00000556992 NREPQ16612 68 aa2.73□□□□□ -1.97
SRP54-212ENST00000556992 C1orf137Q5JT78 98 aa2.73□□□□□ -1.97
SRP54-212ENST00000556992 NOTCH2NLQ7Z3S9 236 aa2.73□□□□□ -1.97
SRP54-212ENST00000556992 KRTAP11-1Q8IUC1 163 aa2.73□□□□□ -1.97
SRP54-212ENST00000556992 ANAPC13Q9BS18 74 aa2.73□□□□□ -1.97
SRP54-212ENST00000556992 ZNF706Q9Y5V0 76 aaPredicted RBP2.73□□□□□ -1.97
SRP54-212ENST00000556992 HMCN2Q8NDA2 5059 aa2.72□□□□□ -1.97
SRP54-212ENST00000556992 IGKV3D-7A0A0C4DH55 119 aa2.72□□□□□ -1.97
SRP54-212ENST00000556992 LCE6AA0A183 80 aa2.72□□□□□ -1.97
Retrieved 100 of 20,778 RNA–protein pairs in 77.3 ms