RNA–Protein interactions for RNA: ENST00000554698.5

SDR39U1-208, Transcript of short chain dehydrogenase/reductase family 39U member 1, humanhuman

TSL 1 (best) BASIC

Gene SDR39U1, Length 1,364 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDR39U1-208ENST00000554698 HMCN2Q8NDA2 5059 aa12.38□□□□□ -0.43
SDR39U1-208ENST00000554698 PPDPFLQ8WWR9 84 aa12.37□□□□□ -0.43
SDR39U1-208ENST00000554698 C4orf48Q5BLP8 95 aa12.36□□□□□ -0.43
SDR39U1-208ENST00000554698 OCIAD2Q56VL3 154 aa12.35□□□□□ -0.43
SDR39U1-208ENST00000554698 BATFQ16520 125 aa12.33□□□□□ -0.44
SDR39U1-208ENST00000554698 SPINK1P00995 79 aa12.32□□□□□ -0.44
SDR39U1-208ENST00000554698 SCGB1C2P0DMR2 95 aa12.3□□□□□ -0.44
SDR39U1-208ENST00000554698 F8WEM9 126 aa12.29□□□□□ -0.44
SDR39U1-208ENST00000554698 RPS29P62273 56 aaKnown RBP12.29□□□□□ -0.44
SDR39U1-208ENST00000554698 SNHG12Q9BXW3 62 aa12.28□□□□□ -0.44
SDR39U1-208ENST00000554698 IGLV8-61A0A075B6I0 122 aa12.27□□□□□ -0.45
SDR39U1-208ENST00000554698 DNAL4O96015 105 aa12.27□□□□□ -0.45
SDR39U1-208ENST00000554698 GHRHP01286 108 aa12.27□□□□□ -0.45
SDR39U1-208ENST00000554698 NAA38Q9BRA0 125 aaKnown RBP12.27□□□□□ -0.45
SDR39U1-208ENST00000554698 LST1O00453 97 aa12.26□□□□□ -0.45
SDR39U1-208ENST00000554698 TRACP01848 142 aa12.26□□□□□ -0.45
SDR39U1-208ENST00000554698 CD164Q04900 197 aa12.23□□□□□ -0.45
SDR39U1-208ENST00000554698 ORMDL1Q9P0S3 153 aa12.23□□□□□ -0.45
SDR39U1-208ENST00000554698 A0A0G2JQZ4 141 aa12.22□□□□□ -0.45
SDR39U1-208ENST00000554698 H3BQ85 93 aa12.21□□□□□ -0.45
SDR39U1-208ENST00000554698 NDUFV3P56181 108 aaKnown RBP12.21□□□□□ -0.45
SDR39U1-208ENST00000554698 Q6JHZ5 121 aa12.21□□□□□ -0.45
SDR39U1-208ENST00000554698 RETNLBQ9BQ08 111 aa12.21□□□□□ -0.45
SDR39U1-208ENST00000554698 FABP2P12104 132 aa12.2□□□□□ -0.46
SDR39U1-208ENST00000554698 PRR4Q16378 134 aa12.2□□□□□ -0.46
SDR39U1-208ENST00000554698 HRCT1Q6UXD1 115 aa12.2□□□□□ -0.46
SDR39U1-208ENST00000554698 TAX1BP3O14907 124 aa12.19□□□□□ -0.46
SDR39U1-208ENST00000554698 H3BUT2 72 aa12.18□□□□□ -0.46
SDR39U1-208ENST00000554698 TCL1BO95988 128 aa12.18□□□□□ -0.46
SDR39U1-208ENST00000554698 IGFL1Q6UW32 110 aa12.18□□□□□ -0.46
SDR39U1-208ENST00000554698 C9orf118A6NHY6 69 aa12.17□□□□□ -0.46
SDR39U1-208ENST00000554698 TMEM256-PLSCR3K7ERE1 68 aa12.17□□□□□ -0.46
SDR39U1-208ENST00000554698 LYRM7Q5U5X0 104 aa12.17□□□□□ -0.46
SDR39U1-208ENST00000554698 ATXN8Q156A1 80 aa12.16□□□□□ -0.46
SDR39U1-208ENST00000554698 LIMD2Q9BT23 127 aa12.15□□□□□ -0.46
SDR39U1-208ENST00000554698 H3BMG7 143 aa12.13□□□□□ -0.47
SDR39U1-208ENST00000554698 TRBV20-1A0A075B6N2 111 aa12.12□□□□□ -0.47
SDR39U1-208ENST00000554698 Q5XG85 94 aa12.12□□□□□ -0.47
SDR39U1-208ENST00000554698 PCP4L1A6NKN8 68 aa12.11□□□□□ -0.47
SDR39U1-208ENST00000554698 UBE2V1Q13404 147 aa12.11□□□□□ -0.47
SDR39U1-208ENST00000554698 FP248Q71RG6 208 aaPredicted RBP12.11□□□□□ -0.47
SDR39U1-208ENST00000554698 A0A1W2PPM0 123 aa12.1□□□□□ -0.47
SDR39U1-208ENST00000554698 COL5A1-AS1Q5SY13 56 aa12.1□□□□□ -0.47
SDR39U1-208ENST00000554698 IGLV7-46A0A075B6I9 117 aa12.08□□□□□ -0.48
SDR39U1-208ENST00000554698 BAALC-AS2P0C853 105 aa12.08□□□□□ -0.48
SDR39U1-208ENST00000554698 TRBV7-7A0A0K0K1E9 115 aa12.06□□□□□ -0.48
SDR39U1-208ENST00000554698 LRP2P98164 4655 aa12.06□□□□□ -0.48
SDR39U1-208ENST00000554698 Q6Q795 121 aa12.05□□□□□ -0.48
SDR39U1-208ENST00000554698 ANKRD29Q8N6D5 301 aa12.05□□□□□ -0.48
SDR39U1-208ENST00000554698 TPRXLQ17RH7 258 aa12.02□□□□□ -0.49
SDR39U1-208ENST00000554698 TEN1Q86WV5 123 aa12.02□□□□□ -0.49
SDR39U1-208ENST00000554698 A0A1B0GV72 72 aa12.01□□□□□ -0.49
SDR39U1-208ENST00000554698 UBR4Q5T4S7 5183 aa12.01□□□□□ -0.49
SDR39U1-208ENST00000554698 LPAP08519 4548 aa12□□□□□ -0.49
SDR39U1-208ENST00000554698 C9JAW5 83 aa11.99□□□□□ -0.49
SDR39U1-208ENST00000554698 A0A1W2PNM2 257 aa11.98□□□□□ -0.49
SDR39U1-208ENST00000554698 ASB16-AS1Q495Z4 193 aa11.98□□□□□ -0.49
SDR39U1-208ENST00000554698 C1orf195Q5TG92 126 aa11.98□□□□□ -0.49
SDR39U1-208ENST00000554698 RBM3P98179 157 aaKnown RBP11.97□□□□□ -0.49
SDR39U1-208ENST00000554698 TRBV7-4A0A0J9YYF1 115 aa11.96□□□□□ -0.49
SDR39U1-208ENST00000554698 KRTAP13-3Q3SY46 172 aa11.95□□□□□ -0.5
SDR39U1-208ENST00000554698 SPCS1Q9Y6A9 102 aa11.95□□□□□ -0.5
SDR39U1-208ENST00000554698 DSCR8Q96T75 97 aa11.92□□□□□ -0.5
SDR39U1-208ENST00000554698 SS18L2Q9UHA2 77 aa11.92□□□□□ -0.5
SDR39U1-208ENST00000554698 A0A087WSZ3 146 aa11.91□□□□□ -0.5
SDR39U1-208ENST00000554698 JMJD7-PLA2G4BH0Y9G9 81 aa11.91□□□□□ -0.5
SDR39U1-208ENST00000554698 H3BT86 120 aa11.91□□□□□ -0.5
SDR39U1-208ENST00000554698 CCKP06307 115 aa11.91□□□□□ -0.5
SDR39U1-208ENST00000554698 CDIP1Q9H305 208 aa11.89□□□□□ -0.51
SDR39U1-208ENST00000554698 MTURNQ8N3F0 131 aa11.88□□□□□ -0.51
SDR39U1-208ENST00000554698 OBSCN-AS1Q96MR7 158 aa11.88□□□□□ -0.51
SDR39U1-208ENST00000554698 K7EP34 96 aa11.86□□□□□ -0.51
SDR39U1-208ENST00000554698 LOC110117498A0A087WWA1 95 aa11.84□□□□□ -0.51
SDR39U1-208ENST00000554698 Q6ZQT0 140 aa11.82□□□□□ -0.52
SDR39U1-208ENST00000554698 VPS25Q9BRG1 176 aa11.82□□□□□ -0.52
SDR39U1-208ENST00000554698 PDE6GP18545 87 aa11.81□□□□□ -0.52
SDR39U1-208ENST00000554698 C14orf132Q9NPU4 83 aa11.8□□□□□ -0.52
SDR39U1-208ENST00000554698 Q96NJ1 140 aa11.79□□□□□ -0.52
SDR39U1-208ENST00000554698 SMCPP49901 116 aaPredicted RBP11.79□□□□□ -0.52
SDR39U1-208ENST00000554698 PRO0461Q9UI25 63 aa11.79□□□□□ -0.52
SDR39U1-208ENST00000554698 GTF2H5Q6ZYL4 71 aa11.77□□□□□ -0.53
SDR39U1-208ENST00000554698 C21orf62-AS1Q17RA5 79 aa11.76□□□□□ -0.53
SDR39U1-208ENST00000554698 C9orf92A6NGG3 77 aa11.75□□□□□ -0.53
SDR39U1-208ENST00000554698 A0A1B0GW54 56 aa11.74□□□□□ -0.53
SDR39U1-208ENST00000554698 XP32Q5T750 250 aa11.74□□□□□ -0.53
SDR39U1-208ENST00000554698 LINC00472Q9H8W2 130 aa11.72□□□□□ -0.53
SDR39U1-208ENST00000554698 RNF213Q63HN8 5207 aa11.68□□□□□ -0.54
SDR39U1-208ENST00000554698 IGKV4-1P06312 121 aa11.66□□□□□ -0.54
SDR39U1-208ENST00000554698 SIGMAR1Q99720 223 aa11.66□□□□□ -0.54
SDR39U1-208ENST00000554698 F8W1H4 67 aa11.65□□□□□ -0.55
SDR39U1-208ENST00000554698 DEFB116Q30KQ4 102 aa11.64□□□□□ -0.55
SDR39U1-208ENST00000554698 SEC61BP60468 96 aaKnown RBP11.6□□□□□ -0.55
SDR39U1-208ENST00000554698 J3KT08 172 aa11.58□□□□□ -0.56
SDR39U1-208ENST00000554698 MUC17Q685J3 4493 aa11.58□□□□□ -0.56
SDR39U1-208ENST00000554698 RPL37P61927 97 aaKnown RBP11.54□□□□□ -0.56
SDR39U1-208ENST00000554698 NREPQ16612 68 aa11.54□□□□□ -0.56
SDR39U1-208ENST00000554698 MUC2Q02817 5179 aa11.53□□□□□ -0.56
SDR39U1-208ENST00000554698 ETDBQ3ZM63 59 aa11.53□□□□□ -0.56
SDR39U1-208ENST00000554698 DSCR10P59022 87 aa11.52□□□□□ -0.57
SDR39U1-208ENST00000554698 IGHV6-1A0A0B4J1U7 121 aa11.5□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 67.2 ms