RNA–Protein interactions for RNA: ENST00000552800.2

TMEM116-216, Transcript of transmembrane protein 116, humanhuman

TSL 3

Gene TMEM116, Length 485 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM116-216ENST00000552800 LCE6AA0A183 80 aa6.09□□□□□ -1.43
TMEM116-216ENST00000552800 NDUFV3P56181 108 aaKnown RBP6.09□□□□□ -1.43
TMEM116-216ENST00000552800 PHF5AQ7RTV0 110 aaKnown RBP6.09□□□□□ -1.43
TMEM116-216ENST00000552800 KRTAP11-1Q8IUC1 163 aa6.09□□□□□ -1.43
TMEM116-216ENST00000552800 SMCR5Q8TEV8 140 aa6.09□□□□□ -1.43
TMEM116-216ENST00000552800 HYDINQ4G0P3 5121 aa6.08□□□□□ -1.44
TMEM116-216ENST00000552800 SACSQ9NZJ4 4579 aa6.08□□□□□ -1.44
TMEM116-216ENST00000552800 IGLV5-52A0A0A0MRZ9 124 aa6.08□□□□□ -1.44
TMEM116-216ENST00000552800 Q6ZQT0 140 aa6.08□□□□□ -1.44
TMEM116-216ENST00000552800 SIGMAR1Q99720 223 aa6.08□□□□□ -1.44
TMEM116-216ENST00000552800 VPS25Q9BRG1 176 aa6.08□□□□□ -1.44
TMEM116-216ENST00000552800 PKD1P98161 4303 aa6.08□□□□□ -1.44
TMEM116-216ENST00000552800 IGLV8-61A0A075B6I0 122 aa6.07□□□□□ -1.44
TMEM116-216ENST00000552800 BCE1O60756 84 aa6.07□□□□□ -1.44
TMEM116-216ENST00000552800 LINC00336Q6ZUF6 198 aa6.07□□□□□ -1.44
TMEM116-216ENST00000552800 DNAH5Q8TE73 4624 aa6.07□□□□□ -1.44
TMEM116-216ENST00000552800 SMIM29Q86T20 159 aa6.06□□□□□ -1.44
TMEM116-216ENST00000552800 FAM30AQ9NZY2 134 aa6.06□□□□□ -1.44
TMEM116-216ENST00000552800 ERC2-IT1O76042 136 aa6.05□□□□□ -1.44
TMEM116-216ENST00000552800 Q6Q795 121 aa6.05□□□□□ -1.44
TMEM116-216ENST00000552800 DSCR8Q96T75 97 aa6.05□□□□□ -1.44
TMEM116-216ENST00000552800 IMUPQ9GZP8 106 aa6.05□□□□□ -1.44
TMEM116-216ENST00000552800 C14orf132Q9NPU4 83 aa6.05□□□□□ -1.44
TMEM116-216ENST00000552800 SCGB1A1P11684 91 aa6.04□□□□□ -1.44
TMEM116-216ENST00000552800 LINC00643Q86TS7 51 aa6.04□□□□□ -1.44
TMEM116-216ENST00000552800 Q8N1X5 172 aa6.04□□□□□ -1.44
TMEM116-216ENST00000552800 LAMTOR3Q9UHA4 124 aa6.04□□□□□ -1.44
TMEM116-216ENST00000552800 XGP55808 180 aa6.03□□□□□ -1.44
TMEM116-216ENST00000552800 UBE2BP63146 152 aa6.03□□□□□ -1.44
TMEM116-216ENST00000552800 FAM19A1Q7Z5A9 133 aa6.03□□□□□ -1.44
TMEM116-216ENST00000552800 TRBV7-7A0A0K0K1E9 115 aa6.01□□□□□ -1.45
TMEM116-216ENST00000552800 LINC00483Q53H64 154 aa6.01□□□□□ -1.45
TMEM116-216ENST00000552800 Q6JHZ5 121 aa6.01□□□□□ -1.45
TMEM116-216ENST00000552800 SPRR4Q96PI1 79 aa6.01□□□□□ -1.45
TMEM116-216ENST00000552800 LINC00846Q9NV44 126 aa6.01□□□□□ -1.45
TMEM116-216ENST00000552800 A0A1B0GVY2 172 aa6□□□□□ -1.45
TMEM116-216ENST00000552800 ZNF861PO60384 105 aa6□□□□□ -1.45
TMEM116-216ENST00000552800 RPL37AP61513 92 aaKnown RBP6□□□□□ -1.45
TMEM116-216ENST00000552800 GAGE2AQ6NT46 116 aa6□□□□□ -1.45
TMEM116-216ENST00000552800 ST20-AS1Q8NBB2 130 aa6□□□□□ -1.45
TMEM116-216ENST00000552800 DPH3Q96FX2 82 aa6□□□□□ -1.45
TMEM116-216ENST00000552800 PSORS1C2Q9UIG4 136 aa6□□□□□ -1.45
TMEM116-216ENST00000552800 PRLHP81277 87 aa5.99□□□□□ -1.45
TMEM116-216ENST00000552800 CIRBP-AS1Q8TBR5 109 aa5.99□□□□□ -1.45
TMEM116-216ENST00000552800 MT-ATP8P03928 68 aa5.98□□□□□ -1.45
TMEM116-216ENST00000552800 KRTAP10-1P60331 282 aa5.98□□□□□ -1.45
TMEM116-216ENST00000552800 UBE2AP49459 152 aa5.97□□□□□ -1.45
TMEM116-216ENST00000552800 ATP5EP2Q5VTU8 51 aa5.97□□□□□ -1.45
TMEM116-216ENST00000552800 CRYGAP11844 174 aa5.96□□□□□ -1.46
TMEM116-216ENST00000552800 DEFB105AQ8NG35 78 aa5.96□□□□□ -1.46
TMEM116-216ENST00000552800 HIGD2AQ9BW72 106 aa5.96□□□□□ -1.46
TMEM116-216ENST00000552800 IGLV7-43P04211 117 aa5.95□□□□□ -1.46
TMEM116-216ENST00000552800 FUSP35637 526 aaKnown RBP eCLIP5.95□□□□□ -1.46
TMEM116-216ENST00000552800 C1orf137Q5JT78 98 aa5.95□□□□□ -1.46
TMEM116-216ENST00000552800 SCXQ7RTU7 201 aa5.95□□□□□ -1.46
TMEM116-216ENST00000552800 Q8NBF4 154 aa5.95□□□□□ -1.46
TMEM116-216ENST00000552800 UBL5Q9BZL1 73 aa5.95□□□□□ -1.46
TMEM116-216ENST00000552800 ZNF706Q9Y5V0 76 aaPredicted RBP5.95□□□□□ -1.46
TMEM116-216ENST00000552800 A0A1W2PNM2 257 aa5.94□□□□□ -1.46
TMEM116-216ENST00000552800 CXCL6P80162 114 aa5.94□□□□□ -1.46
TMEM116-216ENST00000552800 RYR2Q92736 4967 aa5.93□□□□□ -1.46
TMEM116-216ENST00000552800 Q6ZVQ6 151 aa5.92□□□□□ -1.46
TMEM116-216ENST00000552800 LRP1BQ9NZR2 4599 aa5.92□□□□□ -1.46
TMEM116-216ENST00000552800 IGFL1Q6UW32 110 aa5.91□□□□□ -1.46
TMEM116-216ENST00000552800 C3orf22Q8N5N4 141 aa5.91□□□□□ -1.46
TMEM116-216ENST00000552800 SRRM2Q9UQ35 2752 aaKnown RBP5.9□□□□□ -1.46
TMEM116-216ENST00000552800 F8WEM9 126 aa5.9□□□□□ -1.46
TMEM116-216ENST00000552800 HIST1H4AP62805 103 aaKnown RBP5.9□□□□□ -1.46
TMEM116-216ENST00000552800 VPS13BQ7Z7G8 4022 aa5.9□□□□□ -1.47
TMEM116-216ENST00000552800 PKHD1P08F94 4074 aa5.89□□□□□ -1.47
TMEM116-216ENST00000552800 KMT2CQ8NEZ4 4911 aaKnown RBP5.88□□□□□ -1.47
TMEM116-216ENST00000552800 FAM229BQ4G0N7 80 aa5.88□□□□□ -1.47
TMEM116-216ENST00000552800 DYNC1H1Q14204 4646 aaKnown RBP5.87□□□□□ -1.47
TMEM116-216ENST00000552800 NREPQ16612 68 aa5.87□□□□□ -1.47
TMEM116-216ENST00000552800 SSBP3-AS1Q7Z2R9 100 aa5.87□□□□□ -1.47
TMEM116-216ENST00000552800 A0A1B0GV72 72 aa5.86□□□□□ -1.47
TMEM116-216ENST00000552800 CD164Q04900 197 aa5.86□□□□□ -1.47
TMEM116-216ENST00000552800 PCP4P48539 62 aa5.84□□□□□ -1.47
TMEM116-216ENST00000552800 SPINK6Q6UWN8 80 aa5.83□□□□□ -1.48
TMEM116-216ENST00000552800 KRTAP10-4P60372 401 aaPredicted RBP5.82□□□□□ -1.48
TMEM116-216ENST00000552800 Q5XG85 94 aa5.82□□□□□ -1.48
TMEM116-216ENST00000552800 LINC00472Q9H8W2 130 aa5.82□□□□□ -1.48
TMEM116-216ENST00000552800 IGKV3D-7A0A0C4DH55 119 aa5.81□□□□□ -1.48
TMEM116-216ENST00000552800 KRTAP1-4P0C5Y4 121 aa5.81□□□□□ -1.48
TMEM116-216ENST00000552800 ASB16-AS1Q495Z4 193 aa5.81□□□□□ -1.48
TMEM116-216ENST00000552800 APOBP04114 4563 aaKnown RBP5.81□□□□□ -1.48
TMEM116-216ENST00000552800 BPY2O14599 106 aa5.8□□□□□ -1.48
TMEM116-216ENST00000552800 HAMPP81172 84 aa5.8□□□□□ -1.48
TMEM116-216ENST00000552800 DSCR10P59022 87 aa5.79□□□□□ -1.48
TMEM116-216ENST00000552800 A0A087WSZ3 146 aa5.78□□□□□ -1.48
TMEM116-216ENST00000552800 J3KT08 172 aa5.78□□□□□ -1.48
TMEM116-216ENST00000552800 ATOX1O00244 68 aa5.77□□□□□ -1.49
TMEM116-216ENST00000552800 CDK2AP2O75956 126 aa5.77□□□□□ -1.49
TMEM116-216ENST00000552800 IGKV4-1P06312 121 aa5.77□□□□□ -1.49
TMEM116-216ENST00000552800 SS18L2Q9UHA2 77 aa5.77□□□□□ -1.49
TMEM116-216ENST00000552800 A0A0G2JQZ4 141 aa5.76□□□□□ -1.49
TMEM116-216ENST00000552800 FAM236AA0A1B0GUQ0 79 aa5.76□□□□□ -1.49
TMEM116-216ENST00000552800 FAM236BA0A1B0GV22 79 aa5.76□□□□□ -1.49
TMEM116-216ENST00000552800 Q96NJ1 140 aa5.76□□□□□ -1.49
TMEM116-216ENST00000552800 MOBPQ13875 183 aa5.75□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 66.1 ms