RNA–Protein interactions for RNA: ENST00000549268.1

USP15-213, Transcript of ubiquitin specific peptidase 15, humanhuman

TSL 5

Gene USP15, Length 1,087 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP15-213ENST00000549268 COX6A2Q02221 97 aa1.03□□□□□ -2.24
USP15-213ENST00000549268 SPATA8Q6RVD6 105 aa1.03□□□□□ -2.24
USP15-213ENST00000549268 DEFB107AQ8IZN7 70 aa1.03□□□□□ -2.24
USP15-213ENST00000549268 PRXQ9BXM0 1461 aa1.03□□□□□ -2.24
USP15-213ENST00000549268 EIF2AK4Q9P2K8 1649 aaKnown RBP1.03□□□□□ -2.24
USP15-213ENST00000549268 C5P01031 1676 aa1.03□□□□□ -2.24
USP15-213ENST00000549268 C4AP0C0L4 1744 aa1.03□□□□□ -2.24
USP15-213ENST00000549268 WNK1Q9H4A3 2382 aa1.03□□□□□ -2.25
USP15-213ENST00000549268 H3BQF6 201 aa1.02□□□□□ -2.25
USP15-213ENST00000549268 LY75O60449 1722 aa1.02□□□□□ -2.25
USP15-213ENST00000549268 HMGN3Q15651 99 aa1.02□□□□□ -2.25
USP15-213ENST00000549268 CACNA1EQ15878 2313 aa1.01□□□□□ -2.25
USP15-213ENST00000549268 RGPD8O14715 1765 aaPredicted RBP1.01□□□□□ -2.25
USP15-213ENST00000549268 RGPD5Q99666 1765 aa1.01□□□□□ -2.25
USP15-213ENST00000549268 AKAP9Q99996 3911 aa1.01□□□□□ -2.25
USP15-213ENST00000549268 H0Y9P7 68 aa1.01□□□□□ -2.25
USP15-213ENST00000549268 LEPROTL1O95214 131 aa1.01□□□□□ -2.25
USP15-213ENST00000549268 S100A3P33764 101 aa1.01□□□□□ -2.25
USP15-213ENST00000549268 SMIM11AP58511 58 aa1.01□□□□□ -2.25
USP15-213ENST00000549268 PLAC8Q9NZF1 115 aa1.01□□□□□ -2.25
USP15-213ENST00000549268 RYR2Q92736 4967 aa1.01□□□□□ -2.25
USP15-213ENST00000549268 SONP18583 2426 aaKnown RBP1.01□□□□□ -2.25
USP15-213ENST00000549268 CSPG4Q6UVK1 2322 aa1.01□□□□□ -2.25
USP15-213ENST00000549268 AHCTF1Q8WYP5 2266 aa1.01□□□□□ -2.25
USP15-213ENST00000549268 COL7A1Q02388 2944 aa1.01□□□□□ -2.25
USP15-213ENST00000549268 TSC2P49815 1807 aa1.01□□□□□ -2.25
USP15-213ENST00000549268 PPLO60437 1756 aa1.01□□□□□ -2.25
USP15-213ENST00000549268 ABCC6O95255 1503 aa1□□□□□ -2.25
USP15-213ENST00000549268 MYH4Q9Y623 1939 aa1□□□□□ -2.25
USP15-213ENST00000549268 A0A0D9SFI3 127 aa1□□□□□ -2.25
USP15-213ENST00000549268 D6R8Y8 96 aa1□□□□□ -2.25
USP15-213ENST00000549268 HMGN2P05204 90 aaKnown RBP1□□□□□ -2.25
USP15-213ENST00000549268 MUSTN1Q8IVN3 82 aa1□□□□□ -2.25
USP15-213ENST00000549268 CNFNQ9BYD5 112 aa1□□□□□ -2.25
USP15-213ENST00000549268 RABAC1Q9UI14 185 aa1□□□□□ -2.25
USP15-213ENST00000549268 UBR3Q6ZT12 1888 aa1□□□□□ -2.25
USP15-213ENST00000549268 ACACAQ13085 2346 aa1□□□□□ -2.25
USP15-213ENST00000549268 CRYBG1Q9Y4K1 1723 aa1□□□□□ -2.25
USP15-213ENST00000549268 ANK2Q01484 3957 aa1□□□□□ -2.25
USP15-213ENST00000549268 SVEP1Q4LDE5 3571 aa1□□□□□ -2.25
USP15-213ENST00000549268 BSNQ9UPA5 3926 aa0.99□□□□□ -2.25
USP15-213ENST00000549268 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP0.99□□□□□ -2.253e-7■■■■■ 33.5
USP15-213ENST00000549268 BCORQ6W2J9 1755 aa0.99□□□□□ -2.25
USP15-213ENST00000549268 CDC42BPAQ5VT25 1732 aa0.99□□□□□ -2.25
USP15-213ENST00000549268 ZNF831Q5JPB2 1677 aa0.99□□□□□ -2.25
USP15-213ENST00000549268 ACANP16112 2415 aa0.99□□□□□ -2.25
USP15-213ENST00000549268 HERC1Q15751 4861 aa0.98□□□□□ -2.25
USP15-213ENST00000549268 STAB2Q8WWQ8 2551 aa0.98□□□□□ -2.25
USP15-213ENST00000549268 I3L2K1 104 aa0.98□□□□□ -2.25
USP15-213ENST00000549268 KRTAP19-3Q7Z4W3 81 aa0.98□□□□□ -2.25
USP15-213ENST00000549268 TP53AIP1Q9HCN2 124 aa0.98□□□□□ -2.25
USP15-213ENST00000549268 SPCS1Q9Y6A9 102 aa0.98□□□□□ -2.25
USP15-213ENST00000549268 SRRM2Q9UQ35 2752 aaKnown RBP0.98□□□□□ -2.25
USP15-213ENST00000549268 LRRC37AA6NMS7 1700 aa0.98□□□□□ -2.25
USP15-213ENST00000549268 C4BP0C0L5 1744 aa0.98□□□□□ -2.25
USP15-213ENST00000549268 DDX60LQ5H9U9 1706 aaKnown RBP0.98□□□□□ -2.25
USP15-213ENST00000549268 TOGARAM1Q9Y4F4 1720 aa0.98□□□□□ -2.25
USP15-213ENST00000549268 GCC2Q8IWJ2 1684 aa0.97□□□□□ -2.25
USP15-213ENST00000549268 ABCA13Q86UQ4 5058 aa0.97□□□□□ -2.25
USP15-213ENST00000549268 LINC00959A0A1B0GUT2 108 aa0.97□□□□□ -2.25
USP15-213ENST00000549268 SNRPFP62306 86 aaKnown RBP0.97□□□□□ -2.25
USP15-213ENST00000549268 GNGT1P63211 74 aa0.97□□□□□ -2.25
USP15-213ENST00000549268 NMSQ5H8A3 153 aa0.97□□□□□ -2.25
USP15-213ENST00000549268 ALKAL2Q6UX46 152 aa0.97□□□□□ -2.25
USP15-213ENST00000549268 SMIM5Q71RC9 77 aa0.97□□□□□ -2.25
USP15-213ENST00000549268 C6orf201Q7Z4U5 140 aa0.97□□□□□ -2.25
USP15-213ENST00000549268 PRO0255Q9UI72 69 aa0.97□□□□□ -2.25
USP15-213ENST00000549268 APC2O95996 2303 aa0.97□□□□□ -2.25
USP15-213ENST00000549268 HERC2O95714 4834 aa0.96□□□□□ -2.26
USP15-213ENST00000549268 DDX60Q8IY21 1712 aaKnown RBP0.96□□□□□ -2.26
USP15-213ENST00000549268 IQCF6A8MYZ5 107 aa0.96□□□□□ -2.26
USP15-213ENST00000549268 WFDC2Q14508 124 aa0.96□□□□□ -2.26
USP15-213ENST00000549268 FAM208AQ9UK61 1670 aaKnown RBP0.96□□□□□ -2.26
USP15-213ENST00000549268 AHNAKQ09666 5890 aaKnown RBP0.96□□□□□ -2.26
USP15-213ENST00000549268 ARFGEF2Q9Y6D5 1785 aa0.96□□□□□ -2.26
USP15-213ENST00000549268 DOT1LQ8TEK3 1739 aa0.95□□□□□ -2.26
USP15-213ENST00000549268 A0A1B0GU69 56 aa0.95□□□□□ -2.26
USP15-213ENST00000549268 GOLGA4Q13439 2230 aaKnown RBP0.95□□□□□ -2.26
USP15-213ENST00000549268 CCDC141Q6ZP82 1450 aa0.94□□□□□ -2.26
USP15-213ENST00000549268 RNF213Q63HN8 5207 aa0.94□□□□□ -2.26
USP15-213ENST00000549268 IQGAP3Q86VI3 1631 aa0.94□□□□□ -2.26
USP15-213ENST00000549268 TRBV7-4A0A0J9YYF1 115 aa0.94□□□□□ -2.26
USP15-213ENST00000549268 LINC00643Q86TS7 51 aa0.94□□□□□ -2.26
USP15-213ENST00000549268 S100A13Q99584 98 aa0.94□□□□□ -2.26
USP15-213ENST00000549268 UBE2D4Q9Y2X8 147 aa0.94□□□□□ -2.26
USP15-213ENST00000549268 ZNF469Q96JG9 3925 aaPredicted RBP0.94□□□□□ -2.26
USP15-213ENST00000549268 FAT4Q6V0I7 4981 aa0.93□□□□□ -2.26
USP15-213ENST00000549268 URB1O60287 2271 aaKnown RBP0.92□□□□□ -2.26
USP15-213ENST00000549268 DMBT1Q9UGM3 2413 aaPredicted RBP0.92□□□□□ -2.26
USP15-213ENST00000549268 ST20Q9HBF5 79 aa0.92□□□□□ -2.26
USP15-213ENST00000549268 MYMXA0A1B0GTQ4 84 aa0.91□□□□□ -2.26
USP15-213ENST00000549268 IGLC2P0DOY2 106 aa0.91□□□□□ -2.26
USP15-213ENST00000549268 IGLC3P0DOY3 106 aa0.91□□□□□ -2.26
USP15-213ENST00000549268 DUOX1Q9NRD9 1551 aa0.91□□□□□ -2.26
USP15-213ENST00000549268 PRKDCP78527 4128 aaKnown RBP0.9□□□□□ -2.26
USP15-213ENST00000549268 FSIP2Q5CZC0 6907 aa0.9□□□□□ -2.27
USP15-213ENST00000549268 ADIRFQ15847 76 aa0.9□□□□□ -2.27
USP15-213ENST00000549268 PIGYQ3MUY2 71 aa0.9□□□□□ -2.27
USP15-213ENST00000549268 Q8IZM0 81 aa0.9□□□□□ -2.27
USP15-213ENST00000549268 PLCE1Q9P212 2302 aa0.9□□□□□ -2.27
Retrieved 100 of 20,778 RNA–protein pairs in 43 ms