RNA–Protein interactions for RNA: ENST00000545368.5

CDCA3-210, Transcript of cell division cycle associated 3, humanhuman

TSL 3

Gene CDCA3, Length 619 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDCA3-210ENST00000545368 ATXN8Q156A1 80 aa7.72□□□□□ -1.17
CDCA3-210ENST00000545368 PRR26Q8N8Z3 221 aa7.72□□□□□ -1.17
CDCA3-210ENST00000545368 PPDPFLQ8WWR9 84 aa7.72□□□□□ -1.17
CDCA3-210ENST00000545368 TRBV20-1A0A075B6N2 111 aa7.71□□□□□ -1.18
CDCA3-210ENST00000545368 LINC01547P58512 204 aaPredicted RBP7.71□□□□□ -1.18
CDCA3-210ENST00000545368 LAMTOR3Q9UHA4 124 aa7.71□□□□□ -1.18
CDCA3-210ENST00000545368 IGLV9-49A0A0B4J1Y8 123 aa7.7□□□□□ -1.18
CDCA3-210ENST00000545368 TCL1BO95988 128 aa7.7□□□□□ -1.18
CDCA3-210ENST00000545368 Q8N377 158 aa7.7□□□□□ -1.18
CDCA3-210ENST00000545368 TYMSOSQ8TAI1 123 aa7.7□□□□□ -1.18
CDCA3-210ENST00000545368 ORMDL1Q9P0S3 153 aa7.7□□□□□ -1.18
CDCA3-210ENST00000545368 H3BQ85 93 aa7.69□□□□□ -1.18
CDCA3-210ENST00000545368 C9orf153Q5TBE3 101 aa7.69□□□□□ -1.18
CDCA3-210ENST00000545368 PCLOQ9Y6V0 5065 aa7.68□□□□□ -1.18
CDCA3-210ENST00000545368 F8WEM9 126 aa7.68□□□□□ -1.18
CDCA3-210ENST00000545368 KRTAP13-2Q52LG2 175 aa7.68□□□□□ -1.18
CDCA3-210ENST00000545368 C3orf22Q8N5N4 141 aa7.68□□□□□ -1.18
CDCA3-210ENST00000545368 MOBPQ13875 183 aa7.67□□□□□ -1.18
CDCA3-210ENST00000545368 KRTAP10-8P60410 259 aa7.66□□□□□ -1.18
CDCA3-210ENST00000545368 SMIM29Q86T20 159 aa7.66□□□□□ -1.18
CDCA3-210ENST00000545368 Q8NBF4 154 aa7.66□□□□□ -1.18
CDCA3-210ENST00000545368 MYCBP2O75592 4640 aa7.66□□□□□ -1.18
CDCA3-210ENST00000545368 TMEM256-PLSCR3K7ERE1 68 aa7.65□□□□□ -1.18
CDCA3-210ENST00000545368 MT1HL1P0DM35 61 aa7.65□□□□□ -1.18
CDCA3-210ENST00000545368 SPCS1Q9Y6A9 102 aa7.65□□□□□ -1.18
CDCA3-210ENST00000545368 SSBP3-AS1Q7Z2R9 100 aa7.64□□□□□ -1.19
CDCA3-210ENST00000545368 LRP1Q07954 4544 aaKnown RBP7.63□□□□□ -1.19
CDCA3-210ENST00000545368 FAT3Q8TDW7 4589 aa7.62□□□□□ -1.19
CDCA3-210ENST00000545368 NDUFV3P56181 108 aaKnown RBP7.62□□□□□ -1.19
CDCA3-210ENST00000545368 C9JAW5 83 aa7.61□□□□□ -1.19
CDCA3-210ENST00000545368 H3BMG7 143 aa7.61□□□□□ -1.19
CDCA3-210ENST00000545368 BAALC-AS2P0C853 105 aa7.61□□□□□ -1.19
CDCA3-210ENST00000545368 LINC00304Q8N9R0 145 aa7.61□□□□□ -1.19
CDCA3-210ENST00000545368 K7EP34 96 aa7.6□□□□□ -1.19
CDCA3-210ENST00000545368 UBE2V1Q13404 147 aa7.6□□□□□ -1.19
CDCA3-210ENST00000545368 Q6JHZ5 121 aa7.59□□□□□ -1.19
CDCA3-210ENST00000545368 GTF2H5Q6ZYL4 71 aa7.59□□□□□ -1.19
CDCA3-210ENST00000545368 IGLV8-61A0A075B6I0 122 aa7.58□□□□□ -1.2
CDCA3-210ENST00000545368 SPAG11AQ6PDA7 123 aa7.58□□□□□ -1.2
CDCA3-210ENST00000545368 DMBT1Q9UGM3 2413 aaPredicted RBP7.58□□□□□ -1.2
CDCA3-210ENST00000545368 ANKRD29Q8N6D5 301 aa7.57□□□□□ -1.2
CDCA3-210ENST00000545368 H3BT86 120 aa7.56□□□□□ -1.2
CDCA3-210ENST00000545368 A0A1B0GV72 72 aa7.55□□□□□ -1.2
CDCA3-210ENST00000545368 MTURNQ8N3F0 131 aa7.55□□□□□ -1.2
CDCA3-210ENST00000545368 IGFL1Q6UW32 110 aa7.54□□□□□ -1.2
CDCA3-210ENST00000545368 SPINK1P00995 79 aa7.53□□□□□ -1.2
CDCA3-210ENST00000545368 HRCT1Q6UXD1 115 aa7.53□□□□□ -1.2
CDCA3-210ENST00000545368 TNXBP22105 4242 aa7.53□□□□□ -1.2
CDCA3-210ENST00000545368 JMJD7-PLA2G4BH0Y9G9 81 aa7.52□□□□□ -1.21
CDCA3-210ENST00000545368 RBM3P98179 157 aaKnown RBP7.52□□□□□ -1.21
CDCA3-210ENST00000545368 CD164Q04900 197 aa7.52□□□□□ -1.21
CDCA3-210ENST00000545368 A0A0G2JQZ4 141 aa7.51□□□□□ -1.21
CDCA3-210ENST00000545368 DSCR8Q96T75 97 aa7.51□□□□□ -1.21
CDCA3-210ENST00000545368 RPS29P62273 56 aaKnown RBP7.5□□□□□ -1.21
CDCA3-210ENST00000545368 LIMD2Q9BT23 127 aa7.5□□□□□ -1.21
CDCA3-210ENST00000545368 PRO0461Q9UI25 63 aa7.48□□□□□ -1.21
CDCA3-210ENST00000545368 TRBV7-4A0A0J9YYF1 115 aa7.47□□□□□ -1.21
CDCA3-210ENST00000545368 TEN1Q86WV5 123 aa7.47□□□□□ -1.21
CDCA3-210ENST00000545368 TRBV7-7A0A0K0K1E9 115 aa7.46□□□□□ -1.22
CDCA3-210ENST00000545368 A0A1B0GV90 55 aa7.46□□□□□ -1.22
CDCA3-210ENST00000545368 F8W1H4 67 aa7.46□□□□□ -1.22
CDCA3-210ENST00000545368 Q6Q795 121 aa7.46□□□□□ -1.22
CDCA3-210ENST00000545368 CCKP06307 115 aa7.45□□□□□ -1.22
CDCA3-210ENST00000545368 PDE6GP18545 87 aa7.45□□□□□ -1.22
CDCA3-210ENST00000545368 OBSCN-AS1Q96MR7 158 aa7.45□□□□□ -1.22
CDCA3-210ENST00000545368 C14orf132Q9NPU4 83 aa7.45□□□□□ -1.22
CDCA3-210ENST00000545368 LOC110117498A0A087WWA1 95 aa7.44□□□□□ -1.22
CDCA3-210ENST00000545368 VPS25Q9BRG1 176 aa7.44□□□□□ -1.22
CDCA3-210ENST00000545368 A0A1W2PNM2 257 aa7.43□□□□□ -1.22
CDCA3-210ENST00000545368 Q5XG85 94 aa7.42□□□□□ -1.22
CDCA3-210ENST00000545368 SS18L2Q9UHA2 77 aa7.42□□□□□ -1.22
CDCA3-210ENST00000545368 A0A087WSZ3 146 aa7.41□□□□□ -1.22
CDCA3-210ENST00000545368 Q6ZQT0 140 aa7.41□□□□□ -1.22
CDCA3-210ENST00000545368 RETNLBQ9BQ08 111 aa7.4□□□□□ -1.22
CDCA3-210ENST00000545368 PRR4Q16378 134 aa7.38□□□□□ -1.23
CDCA3-210ENST00000545368 A0A1B0GW54 56 aa7.37□□□□□ -1.23
CDCA3-210ENST00000545368 ETDBQ3ZM63 59 aa7.37□□□□□ -1.23
CDCA3-210ENST00000545368 ASB16-AS1Q495Z4 193 aa7.37□□□□□ -1.23
CDCA3-210ENST00000545368 SVIPQ8NHG7 77 aa7.37□□□□□ -1.23
CDCA3-210ENST00000545368 FP248Q71RG6 208 aaPredicted RBP7.36□□□□□ -1.23
CDCA3-210ENST00000545368 LCE2BO14633 110 aa7.35□□□□□ -1.23
CDCA3-210ENST00000545368 C1orf195Q5TG92 126 aa7.34□□□□□ -1.23
CDCA3-210ENST00000545368 HERC1Q15751 4861 aa7.33□□□□□ -1.24
CDCA3-210ENST00000545368 IGLV7-46A0A075B6I9 117 aa7.31□□□□□ -1.24
CDCA3-210ENST00000545368 NREPQ16612 68 aa7.27□□□□□ -1.25
CDCA3-210ENST00000545368 Q96NJ1 140 aa7.27□□□□□ -1.25
CDCA3-210ENST00000545368 SIGMAR1Q99720 223 aa7.26□□□□□ -1.25
CDCA3-210ENST00000545368 CDIP1Q9H305 208 aa7.26□□□□□ -1.25
CDCA3-210ENST00000545368 IGKV4-1P06312 121 aa7.25□□□□□ -1.25
CDCA3-210ENST00000545368 TPRXLQ17RH7 258 aa7.25□□□□□ -1.25
CDCA3-210ENST00000545368 LINC00472Q9H8W2 130 aa7.25□□□□□ -1.25
CDCA3-210ENST00000545368 J3KT08 172 aa7.24□□□□□ -1.25
CDCA3-210ENST00000545368 DEFB116Q30KQ4 102 aa7.23□□□□□ -1.25
CDCA3-210ENST00000545368 UBL5Q9BZL1 73 aa7.22□□□□□ -1.25
CDCA3-210ENST00000545368 HMCN2Q8NDA2 5059 aa7.21□□□□□ -1.26
CDCA3-210ENST00000545368 KRTAP13-3Q3SY46 172 aa7.21□□□□□ -1.26
CDCA3-210ENST00000545368 LINC00846Q9NV44 126 aa7.21□□□□□ -1.26
CDCA3-210ENST00000545368 ACYP1P07311 99 aa7.2□□□□□ -1.26
CDCA3-210ENST00000545368 Q6ZVQ6 151 aa7.2□□□□□ -1.26
CDCA3-210ENST00000545368 FAM240AA0A1B0GVK7 77 aa7.19□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 53.5 ms