RNA–Protein interactions for RNA: ENST00000545368.5

CDCA3-210, Transcript of cell division cycle associated 3, humanhuman

TSL 3

Gene CDCA3, Length 619 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDCA3-210ENST00000545368 NISCHQ9Y2I1 1504 aa30.75■■■□□ 2.51
CDCA3-210ENST00000545368 CCDC180Q9P1Z9 1646 aa27.22■■□□□ 1.95
CDCA3-210ENST00000545368 ABCC9O60706 1549 aa26.16■■□□□ 1.78
CDCA3-210ENST00000545368 ZCCHC6Q5VYS8 1495 aaKnown RBP25.72■■□□□ 1.71
CDCA3-210ENST00000545368 DCAF8L2P0C7V8 631 aa25.51■■□□□ 1.67
CDCA3-210ENST00000545368 DCAF1Q9Y4B6 1507 aa25.48■■□□□ 1.67
CDCA3-210ENST00000545368 NACADO15069 1562 aa25.46■■□□□ 1.67
CDCA3-210ENST00000545368 MYO15BQ96JP2 1530 aa25.43■■□□□ 1.66
CDCA3-210ENST00000545368 RB1CC1Q8TDY2 1594 aa25.4■■□□□ 1.66
CDCA3-210ENST00000545368 SCRIBQ14160 1630 aa24.86■■□□□ 1.57
CDCA3-210ENST00000545368 UNC13AQ9UPW8 1703 aa24.83■■□□□ 1.57
CDCA3-210ENST00000545368 BICRAQ9NZM4 1560 aa24.55■■□□□ 1.52
CDCA3-210ENST00000545368 SHROOM4Q9ULL8 1493 aa24.55■■□□□ 1.52
CDCA3-210ENST00000545368 PABPN1Q86U42 306 aaKnown RBP eCLIP24.48■■□□□ 1.51
CDCA3-210ENST00000545368 EIF4G1Q04637 1599 aaKnown RBP23.91■■□□□ 1.42
CDCA3-210ENST00000545368 CECR2Q9BXF3 1484 aa23.88■■□□□ 1.41
CDCA3-210ENST00000545368 BAZ1AQ9NRL2 1556 aaPredicted RBP23.85■■□□□ 1.41
CDCA3-210ENST00000545368 SMARCA4P51532 1647 aa23.81■■□□□ 1.4
CDCA3-210ENST00000545368 CC2D2AQ9P2K1 1620 aa23.7■■□□□ 1.39
CDCA3-210ENST00000545368 MROH2BQ7Z745 1585 aa23.69■■□□□ 1.38
CDCA3-210ENST00000545368 RSF1Q96T23 1441 aaPredicted RBP23.57■■□□□ 1.36
CDCA3-210ENST00000545368 SMARCA2P51531 1590 aa23.57■■□□□ 1.36
CDCA3-210ENST00000545368 PEG3Q9GZU2 1588 aa23.55■■□□□ 1.36
CDCA3-210ENST00000545368 ATAD2BQ9ULI0 1458 aa23.53■■□□□ 1.36
CDCA3-210ENST00000545368 DNAJC5BQ9UF47 199 aa23.52■■□□□ 1.36
CDCA3-210ENST00000545368 WIZO95785 1651 aa23.5■■□□□ 1.35
CDCA3-210ENST00000545368 NCAPD3P42695 1498 aa23.44■■□□□ 1.34
CDCA3-210ENST00000545368 HMGXB3Q12766 1538 aa23.42■■□□□ 1.34
CDCA3-210ENST00000545368 BAZ1BQ9UIG0 1483 aaKnown RBP23.4■■□□□ 1.34
CDCA3-210ENST00000545368 SUPT5HO00267 1087 aaKnown RBP23.3■■□□□ 1.32
CDCA3-210ENST00000545368 TOP2AP11388 1531 aaKnown RBP23.28■■□□□ 1.32
CDCA3-210ENST00000545368 CCDC88BA6NC98 1476 aa22.97■■□□□ 1.27
CDCA3-210ENST00000545368 LAMC3Q9Y6N6 1575 aa22.81■■□□□ 1.24
CDCA3-210ENST00000545368 CADPSQ9ULU8 1353 aa22.79■■□□□ 1.24
CDCA3-210ENST00000545368 NESP48681 1621 aa22.75■■□□□ 1.23
CDCA3-210ENST00000545368 CFTRP13569 1480 aa22.74■■□□□ 1.23
CDCA3-210ENST00000545368 PRDM2Q13029 1718 aa22.71■■□□□ 1.23
CDCA3-210ENST00000545368 PDS5BQ9NTI5 1447 aa22.63■■□□□ 1.21
CDCA3-210ENST00000545368 ERCC6Q03468 1493 aa22.57■■□□□ 1.2
CDCA3-210ENST00000545368 FANCD2Q9BXW9 1451 aa22.55■■□□□ 1.2
CDCA3-210ENST00000545368 KIF21AQ7Z4S6 1674 aa22.55■■□□□ 1.2
CDCA3-210ENST00000545368 CEP164Q9UPV0 1460 aa22.5■■□□□ 1.19
CDCA3-210ENST00000545368 MRC2Q9UBG0 1479 aa22.37■■□□□ 1.17
CDCA3-210ENST00000545368 THOC2Q8NI27 1593 aaKnown RBP22.36■■□□□ 1.17
CDCA3-210ENST00000545368 WDR62O43379 1518 aa22.29■■□□□ 1.16
CDCA3-210ENST00000545368 URB2Q14146 1524 aaKnown RBP22.28■■□□□ 1.16
CDCA3-210ENST00000545368 ABCC8Q09428 1581 aa22.28■■□□□ 1.16
CDCA3-210ENST00000545368 DNMBPQ6XZF7 1577 aa22.28■■□□□ 1.16
CDCA3-210ENST00000545368 WRNQ14191 1432 aaPredicted RBP eCLIP22.25■■□□□ 1.15
CDCA3-210ENST00000545368 TOPBP1Q92547 1522 aa22.24■■□□□ 1.15
CDCA3-210ENST00000545368 CUX1P39880 1505 aa22.21■■□□□ 1.15
CDCA3-210ENST00000545368 TOP2BQ02880 1626 aa22.17■■□□□ 1.14
CDCA3-210ENST00000545368 BIVM-ERCC5R4GMW8 1640 aa22.17■■□□□ 1.14
CDCA3-210ENST00000545368 SYNJ1O43426 1573 aa22.17■■□□□ 1.14
CDCA3-210ENST00000545368 CUX2O14529 1486 aa22.15■■□□□ 1.14
CDCA3-210ENST00000545368 FGD5Q6ZNL6 1462 aa22.09■■□□□ 1.13
CDCA3-210ENST00000545368 POLA1P09884 1462 aaPredicted RBP22.07■■□□□ 1.12
CDCA3-210ENST00000545368 IFT140Q96RY7 1462 aa22.01■■□□□ 1.11
CDCA3-210ENST00000545368 TRIM41Q8WV44 630 aa22■■□□□ 1.11
CDCA3-210ENST00000545368 SOGA1O94964 1423 aa21.98■■□□□ 1.11
CDCA3-210ENST00000545368 CHIC1Q5VXU3 224 aa21.97■■□□□ 1.11
CDCA3-210ENST00000545368 RAD54L2Q9Y4B4 1467 aa21.96■■□□□ 1.11
CDCA3-210ENST00000545368 TARBP1Q13395 1621 aaKnown RBP21.95■■□□□ 1.1
CDCA3-210ENST00000545368 WDR97A6NE52 1622 aa21.91■■□□□ 1.1
CDCA3-210ENST00000545368 ABCA10Q8WWZ4 1543 aa21.9■■□□□ 1.1
CDCA3-210ENST00000545368 ZNF608Q9ULD9 1512 aaPredicted RBP21.83■■□□□ 1.09
CDCA3-210ENST00000545368 EIF4G3O43432 1585 aaKnown RBP21.82■■□□□ 1.08
CDCA3-210ENST00000545368 ABCA5Q8WWZ7 1642 aa21.79■■□□□ 1.08
CDCA3-210ENST00000545368 TDRD9Q8NDG6 1382 aaKnown RBP21.78■■□□□ 1.08
CDCA3-210ENST00000545368 KIF27Q86VH2 1401 aa21.76■■□□□ 1.07
CDCA3-210ENST00000545368 AQRO60306 1485 aaKnown RBP eCLIP21.76■■□□□ 1.077e-7■■■■□ 24.1
CDCA3-210ENST00000545368 GAPVD1Q14C86 1478 aa21.75■■□□□ 1.07
CDCA3-210ENST00000545368 PBRM1Q86U86 1689 aa21.73■■□□□ 1.07
CDCA3-210ENST00000545368 GRIN2BQ13224 1484 aa21.7■■□□□ 1.06
CDCA3-210ENST00000545368 ERICH3Q5RHP9 1530 aa21.65■■□□□ 1.06
CDCA3-210ENST00000545368 EEA1Q15075 1411 aa21.65■■□□□ 1.06
CDCA3-210ENST00000545368 RUSC2Q8N2Y8 1516 aa21.64■■□□□ 1.05
CDCA3-210ENST00000545368 SNAPC4Q5SXM2 1469 aa21.61■■□□□ 1.05
CDCA3-210ENST00000545368 MAGI1Q96QZ7 1491 aaPredicted RBP21.6■■□□□ 1.05
CDCA3-210ENST00000545368 CUL7Q14999 1698 aa21.58■■□□□ 1.05
CDCA3-210ENST00000545368 ADAMTS12P58397 1594 aa21.57■■□□□ 1.04
CDCA3-210ENST00000545368 IGF1RP08069 1367 aa21.56■■□□□ 1.04
CDCA3-210ENST00000545368 FAM9AQ8IZU1 332 aaPredicted RBP21.52■■□□□ 1.04
CDCA3-210ENST00000545368 FHAD1B1AJZ9 1412 aa21.52■■□□□ 1.04
CDCA3-210ENST00000545368 SYNJ2O15056 1496 aa21.51■■□□□ 1.03
CDCA3-210ENST00000545368 CSRNP3Q8WYN3 585 aa21.49■■□□□ 1.03
CDCA3-210ENST00000545368 CHD1O14646 1710 aa21.48■■□□□ 1.03
CDCA3-210ENST00000545368 CARMIL1Q5VZK9 1371 aa21.47■■□□□ 1.03
CDCA3-210ENST00000545368 FBLN2P98095 1184 aa21.44■■□□□ 1.02
CDCA3-210ENST00000545368 CHMP7Q8WUX9 453 aaPredicted RBP21.44■■□□□ 1.02
CDCA3-210ENST00000545368 RAPGEF2Q9Y4G8 1499 aa21.42■■□□□ 1.02
CDCA3-210ENST00000545368 GRIN2AQ12879 1464 aa21.41■■□□□ 1.02
CDCA3-210ENST00000545368 PRXQ9BXM0 1461 aa21.41■■□□□ 1.02
CDCA3-210ENST00000545368 KIF21BO75037 1637 aa21.39■■□□□ 1.01
CDCA3-210ENST00000545368 GOLGA3Q08378 1498 aa21.3■■□□□ 1
CDCA3-210ENST00000545368 CEP170Q5SW79 1584 aa21.29■■□□□ 1
CDCA3-210ENST00000545368 NUP160Q12769 1436 aa21.28■■□□□ 1
CDCA3-210ENST00000545368 OSCARQ8IYS5 282 aa21.27■■□□□ 1
CDCA3-210ENST00000545368 CTTNBP2Q8WZ74 1663 aa21.25■□□□□ 0.99
CDCA3-210ENST00000545368 EHMT2Q96KQ7 1210 aa21.22■□□□□ 0.99
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms