RNA–Protein interactions for RNA: ENST00000543004.5

OTUB1-211, Transcript of OTU deubiquitinase, ubiquitin aldehyde binding 1, humanhuman

TSL 5 BASIC

Gene OTUB1, Length 1,647 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
OTUB1-211ENST00000543004 LST1O00453 97 aa12.21□□□□□ -0.46
OTUB1-211ENST00000543004 TCL1BO95988 128 aa12.21□□□□□ -0.46
OTUB1-211ENST00000543004 SNCGO76070 127 aa12.2□□□□□ -0.46
OTUB1-211ENST00000543004 MOBPQ13875 183 aa12.19□□□□□ -0.46
OTUB1-211ENST00000543004 A0A1W2PPM0 123 aa12.17□□□□□ -0.46
OTUB1-211ENST00000543004 DNAL4O96015 105 aa12.16□□□□□ -0.46
OTUB1-211ENST00000543004 C9orf153Q5TBE3 101 aa12.16□□□□□ -0.46
OTUB1-211ENST00000543004 LAMTOR3Q9UHA4 124 aa12.16□□□□□ -0.46
OTUB1-211ENST00000543004 TRACP01848 142 aa12.15□□□□□ -0.46
OTUB1-211ENST00000543004 HERC1Q15751 4861 aa12.14□□□□□ -0.47
OTUB1-211ENST00000543004 ATXN8Q156A1 80 aa12.13□□□□□ -0.47
OTUB1-211ENST00000543004 OCIAD2Q56VL3 154 aa12.12□□□□□ -0.47
OTUB1-211ENST00000543004 Q8NBF4 154 aa12.12□□□□□ -0.47
OTUB1-211ENST00000543004 LYRM7Q5U5X0 104 aa12.11□□□□□ -0.47
OTUB1-211ENST00000543004 ORMDL1Q9P0S3 153 aa12.11□□□□□ -0.47
OTUB1-211ENST00000543004 FABP2P12104 132 aa12.11□□□□□ -0.47
OTUB1-211ENST00000543004 A0A0G2JQZ4 141 aa12.1□□□□□ -0.47
OTUB1-211ENST00000543004 PPDPFLQ8WWR9 84 aa12.1□□□□□ -0.47
OTUB1-211ENST00000543004 TRBV20-1A0A075B6N2 111 aa12.08□□□□□ -0.48
OTUB1-211ENST00000543004 SSBP3-AS1Q7Z2R9 100 aa12.08□□□□□ -0.48
OTUB1-211ENST00000543004 LINC00304Q8N9R0 145 aa12.08□□□□□ -0.48
OTUB1-211ENST00000543004 NDUFV3P56181 108 aaKnown RBP12.06□□□□□ -0.48
OTUB1-211ENST00000543004 F8WEM9 126 aa12.05□□□□□ -0.48
OTUB1-211ENST00000543004 SPCS1Q9Y6A9 102 aa12.05□□□□□ -0.48
OTUB1-211ENST00000543004 H3BMG7 143 aa12.04□□□□□ -0.48
OTUB1-211ENST00000543004 A0A1B0GV72 72 aa12.04□□□□□ -0.48
OTUB1-211ENST00000543004 BAALC-AS2P0C853 105 aa12.04□□□□□ -0.48
OTUB1-211ENST00000543004 TMEM256-PLSCR3K7ERE1 68 aa12.03□□□□□ -0.48
OTUB1-211ENST00000543004 GHRHP01286 108 aa12.03□□□□□ -0.48
OTUB1-211ENST00000543004 C9JAW5 83 aa12.02□□□□□ -0.49
OTUB1-211ENST00000543004 MTURNQ8N3F0 131 aa12.02□□□□□ -0.49
OTUB1-211ENST00000543004 IGLV8-61A0A075B6I0 122 aa12□□□□□ -0.49
OTUB1-211ENST00000543004 HRCT1Q6UXD1 115 aa12□□□□□ -0.49
OTUB1-211ENST00000543004 IGFL1Q6UW32 110 aa11.98□□□□□ -0.49
OTUB1-211ENST00000543004 H3BQ85 93 aa11.97□□□□□ -0.49
OTUB1-211ENST00000543004 UBE2V1Q13404 147 aa11.97□□□□□ -0.49
OTUB1-211ENST00000543004 C4orf48Q5BLP8 95 aa11.97□□□□□ -0.49
OTUB1-211ENST00000543004 K7EP34 96 aa11.96□□□□□ -0.5
OTUB1-211ENST00000543004 ANKRD29Q8N6D5 301 aa11.96□□□□□ -0.5
OTUB1-211ENST00000543004 SPAG11AQ6PDA7 123 aa11.94□□□□□ -0.5
OTUB1-211ENST00000543004 Q6JHZ5 121 aa11.93□□□□□ -0.5
OTUB1-211ENST00000543004 SPINK1P00995 79 aa11.92□□□□□ -0.5
OTUB1-211ENST00000543004 SMCPP49901 116 aaPredicted RBP11.88□□□□□ -0.51
OTUB1-211ENST00000543004 RETNLBQ9BQ08 111 aa11.88□□□□□ -0.51
OTUB1-211ENST00000543004 H3BT86 120 aa11.87□□□□□ -0.51
OTUB1-211ENST00000543004 CD164Q04900 197 aa11.87□□□□□ -0.51
OTUB1-211ENST00000543004 PRO0461Q9UI25 63 aa11.86□□□□□ -0.51
OTUB1-211ENST00000543004 RBM3P98179 157 aaKnown RBP11.86□□□□□ -0.51
OTUB1-211ENST00000543004 GTF2H5Q6ZYL4 71 aa11.86□□□□□ -0.51
OTUB1-211ENST00000543004 TRBV7-4A0A0J9YYF1 115 aa11.83□□□□□ -0.52
OTUB1-211ENST00000543004 A0A1W2PNM2 257 aa11.83□□□□□ -0.52
OTUB1-211ENST00000543004 HMCN2Q8NDA2 5059 aa11.83□□□□□ -0.52
OTUB1-211ENST00000543004 RPS29P62273 56 aaKnown RBP11.82□□□□□ -0.52
OTUB1-211ENST00000543004 A0A1B0GV90 55 aa11.82□□□□□ -0.52
OTUB1-211ENST00000543004 TRBV7-7A0A0K0K1E9 115 aa11.81□□□□□ -0.52
OTUB1-211ENST00000543004 JMJD7-PLA2G4BH0Y9G9 81 aa11.8□□□□□ -0.52
OTUB1-211ENST00000543004 TEN1Q86WV5 123 aa11.8□□□□□ -0.52
OTUB1-211ENST00000543004 OBSCN-AS1Q96MR7 158 aa11.8□□□□□ -0.52
OTUB1-211ENST00000543004 DSCR8Q96T75 97 aa11.8□□□□□ -0.52
OTUB1-211ENST00000543004 C14orf132Q9NPU4 83 aa11.79□□□□□ -0.52
OTUB1-211ENST00000543004 CCKP06307 115 aa11.78□□□□□ -0.52
OTUB1-211ENST00000543004 Q6Q795 121 aa11.78□□□□□ -0.52
OTUB1-211ENST00000543004 LIMD2Q9BT23 127 aa11.78□□□□□ -0.52
OTUB1-211ENST00000543004 VPS25Q9BRG1 176 aa11.77□□□□□ -0.53
OTUB1-211ENST00000543004 PRR4Q16378 134 aa11.75□□□□□ -0.53
OTUB1-211ENST00000543004 A0A087WSZ3 146 aa11.74□□□□□ -0.53
OTUB1-211ENST00000543004 Q5XG85 94 aa11.74□□□□□ -0.53
OTUB1-211ENST00000543004 Q6ZQT0 140 aa11.74□□□□□ -0.53
OTUB1-211ENST00000543004 LOC110117498A0A087WWA1 95 aa11.72□□□□□ -0.53
OTUB1-211ENST00000543004 LPAP08519 4548 aa11.72□□□□□ -0.53
OTUB1-211ENST00000543004 F8W1H4 67 aa11.71□□□□□ -0.53
OTUB1-211ENST00000543004 C1orf195Q5TG92 126 aa11.69□□□□□ -0.54
OTUB1-211ENST00000543004 ETDBQ3ZM63 59 aa11.66□□□□□ -0.54
OTUB1-211ENST00000543004 IGLV7-46A0A075B6I9 117 aa11.64□□□□□ -0.55
OTUB1-211ENST00000543004 PDE6GP18545 87 aa11.64□□□□□ -0.55
OTUB1-211ENST00000543004 ASB16-AS1Q495Z4 193 aa11.64□□□□□ -0.55
OTUB1-211ENST00000543004 SS18L2Q9UHA2 77 aa11.63□□□□□ -0.55
OTUB1-211ENST00000543004 LRP2P98164 4655 aa11.62□□□□□ -0.55
OTUB1-211ENST00000543004 FP248Q71RG6 208 aaPredicted RBP11.62□□□□□ -0.55
OTUB1-211ENST00000543004 Q96NJ1 140 aa11.6□□□□□ -0.55
OTUB1-211ENST00000543004 DEFB116Q30KQ4 102 aa11.57□□□□□ -0.56
OTUB1-211ENST00000543004 LINC00472Q9H8W2 130 aa11.53□□□□□ -0.56
OTUB1-211ENST00000543004 A0A1B0GW54 56 aa11.52□□□□□ -0.57
OTUB1-211ENST00000543004 KRTAP13-3Q3SY46 172 aa11.52□□□□□ -0.57
OTUB1-211ENST00000543004 TPRXLQ17RH7 258 aa11.51□□□□□ -0.57
OTUB1-211ENST00000543004 C21orf62-AS1Q17RA5 79 aa11.49□□□□□ -0.57
OTUB1-211ENST00000543004 C9orf92A6NGG3 77 aa11.48□□□□□ -0.57
OTUB1-211ENST00000543004 IGKV4-1P06312 121 aa11.48□□□□□ -0.57
OTUB1-211ENST00000543004 SIGMAR1Q99720 223 aa11.46□□□□□ -0.58
OTUB1-211ENST00000543004 NREPQ16612 68 aa11.44□□□□□ -0.58
OTUB1-211ENST00000543004 CDIP1Q9H305 208 aa11.43□□□□□ -0.58
OTUB1-211ENST00000543004 LINC00846Q9NV44 126 aa11.43□□□□□ -0.58
OTUB1-211ENST00000543004 UBR4Q5T4S7 5183 aa11.42□□□□□ -0.58
OTUB1-211ENST00000543004 Q6ZVQ6 151 aa11.39□□□□□ -0.59
OTUB1-211ENST00000543004 XP32Q5T750 250 aa11.36□□□□□ -0.59
OTUB1-211ENST00000543004 J3KT08 172 aa11.34□□□□□ -0.59
OTUB1-211ENST00000543004 DSCR10P59022 87 aa11.34□□□□□ -0.59
OTUB1-211ENST00000543004 IGHV6-1A0A0B4J1U7 121 aa11.33□□□□□ -0.6
OTUB1-211ENST00000543004 NOTCH2NLQ7Z3S9 236 aa11.33□□□□□ -0.6
OTUB1-211ENST00000543004 UBL5Q9BZL1 73 aa11.31□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms