RNA–Protein interactions for RNA: ENST00000539921.5

SNHG1-211, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 2 BASIC

Gene SNHG1, Length 1,071 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-211ENST00000539921 KRTAP19-4Q3LI73 84 aa3.7□□□□□ -1.82
SNHG1-211ENST00000539921 LY6G6CO95867 125 aa3.69□□□□□ -1.82
SNHG1-211ENST00000539921 P0C880 135 aa3.69□□□□□ -1.82
SNHG1-211ENST00000539921 DEFB136Q30KP8 78 aa3.69□□□□□ -1.82
SNHG1-211ENST00000539921 MYO18BQ8IUG5 2567 aa3.69□□□□□ -1.82
SNHG1-211ENST00000539921 ABCA2Q9BZC7 2435 aa3.68□□□□□ -1.82
SNHG1-211ENST00000539921 TENM4Q6N022 2769 aa3.68□□□□□ -1.82
SNHG1-211ENST00000539921 A0A1W2PPR1 153 aa3.67□□□□□ -1.82
SNHG1-211ENST00000539921 CDK2AP2O75956 126 aa3.67□□□□□ -1.82
SNHG1-211ENST00000539921 Q96NJ1 140 aa3.67□□□□□ -1.82
SNHG1-211ENST00000539921 C20orf166-AS1Q96NR2 134 aa3.67□□□□□ -1.82
SNHG1-211ENST00000539921 ASH1LQ9NR48 2969 aaKnown RBP3.67□□□□□ -1.82
SNHG1-211ENST00000539921 BAHCC1Q9P281 2608 aa3.67□□□□□ -1.82
SNHG1-211ENST00000539921 FASNP49327 2511 aaKnown RBP3.67□□□□□ -1.82
SNHG1-211ENST00000539921 PRRC2CQ9Y520 2896 aaKnown RBP3.66□□□□□ -1.82
SNHG1-211ENST00000539921 DNAH10OSP0CZ25 163 aa3.66□□□□□ -1.82
SNHG1-211ENST00000539921 Q5W150 140 aa3.66□□□□□ -1.82
SNHG1-211ENST00000539921 LRRK2Q5S007 2527 aa3.66□□□□□ -1.82
SNHG1-211ENST00000539921 FLNCQ14315 2725 aa3.65□□□□□ -1.82
SNHG1-211ENST00000539921 A0A096LPF7 62 aa3.65□□□□□ -1.83
SNHG1-211ENST00000539921 J3QKU1 62 aa3.65□□□□□ -1.83
SNHG1-211ENST00000539921 LINC01556Q5JQF7 62 aa3.65□□□□□ -1.83
SNHG1-211ENST00000539921 CCL19Q99731 98 aa3.65□□□□□ -1.83
SNHG1-211ENST00000539921 K7ERS5 55 aa3.64□□□□□ -1.83
SNHG1-211ENST00000539921 PTPN13Q12923 2485 aa3.64□□□□□ -1.83
SNHG1-211ENST00000539921 LOC100996750A0A140TA64 210 aa3.63□□□□□ -1.83
SNHG1-211ENST00000539921 CHTF8P0CG12 524 aa3.63□□□□□ -1.83
SNHG1-211ENST00000539921 SPART-AS1P0CW21 52 aa3.63□□□□□ -1.83
SNHG1-211ENST00000539921 SEC61BP60468 96 aaKnown RBP3.63□□□□□ -1.83
SNHG1-211ENST00000539921 LINC00304Q8N9R0 145 aa3.63□□□□□ -1.83
SNHG1-211ENST00000539921 KRTAP4-6Q9BYQ5 205 aa3.63□□□□□ -1.83
SNHG1-211ENST00000539921 TACC2O95359 2948 aa3.63□□□□□ -1.83
SNHG1-211ENST00000539921 DOPEY1Q5JWR5 2465 aa3.63□□□□□ -1.83
SNHG1-211ENST00000539921 RELNP78509 3460 aa3.63□□□□□ -1.83
SNHG1-211ENST00000539921 ALMS1Q8TCU4 4167 aa3.62□□□□□ -1.83
SNHG1-211ENST00000539921 USP9XQ93008 2570 aaPredicted RBP3.62□□□□□ -1.83
SNHG1-211ENST00000539921 MAP1AP78559 2803 aaPredicted RBP3.62□□□□□ -1.83
SNHG1-211ENST00000539921 CASC10Q5T4H9 136 aa3.62□□□□□ -1.83
SNHG1-211ENST00000539921 KRTAP7-1Q8IUC3 87 aa3.62□□□□□ -1.83
SNHG1-211ENST00000539921 KRTAP3-1Q9BYR8 98 aa3.62□□□□□ -1.83
SNHG1-211ENST00000539921 NOTCH3Q9UM47 2321 aa3.61□□□□□ -1.83
SNHG1-211ENST00000539921 SETXQ7Z333 2677 aaKnown RBP3.61□□□□□ -1.83
SNHG1-211ENST00000539921 SPTAN1Q13813 2472 aaKnown RBP3.61□□□□□ -1.83
SNHG1-211ENST00000539921 COL12A1Q99715 3063 aa3.6□□□□□ -1.83
SNHG1-211ENST00000539921 USP9YO00507 2555 aaPredicted RBP3.6□□□□□ -1.83
SNHG1-211ENST00000539921 FLNBO75369 2602 aaKnown RBP3.59□□□□□ -1.83
SNHG1-211ENST00000539921 UNC79Q9P2D8 2635 aa3.59□□□□□ -1.83
SNHG1-211ENST00000539921 HECTD1Q9ULT8 2610 aa3.59□□□□□ -1.83
SNHG1-211ENST00000539921 A0A087WTM6 91 aa3.59□□□□□ -1.83
SNHG1-211ENST00000539921 IGKV2-30P06310 120 aa3.59□□□□□ -1.83
SNHG1-211ENST00000539921 DEFB113Q30KQ7 82 aa3.59□□□□□ -1.83
SNHG1-211ENST00000539921 KRTAP11-1Q8IUC1 163 aa3.59□□□□□ -1.83
SNHG1-211ENST00000539921 NBASA2RRP1 2371 aa3.59□□□□□ -1.84
SNHG1-211ENST00000539921 MAST4O15021 2626 aa3.58□□□□□ -1.84
SNHG1-211ENST00000539921 HIVEP3Q5T1R4 2406 aa3.58□□□□□ -1.84
SNHG1-211ENST00000539921 KRTAP15-1Q3LI76 137 aa3.58□□□□□ -1.84
SNHG1-211ENST00000539921 IGKV2D-30A0A075B6S6 120 aa3.57□□□□□ -1.84
SNHG1-211ENST00000539921 PANO1I0J062 215 aa3.57□□□□□ -1.84
SNHG1-211ENST00000539921 ANKRD17O75179 2603 aaKnown RBP3.56□□□□□ -1.84
SNHG1-211ENST00000539921 HRNRQ86YZ3 2850 aaPredicted RBP3.55□□□□□ -1.84
SNHG1-211ENST00000539921 A0A0G2JQZ4 141 aa3.55□□□□□ -1.84
SNHG1-211ENST00000539921 A0A1W2PNN7 141 aa3.55□□□□□ -1.84
SNHG1-211ENST00000539921 H0YAA0 97 aa3.55□□□□□ -1.84
SNHG1-211ENST00000539921 COX6B2Q6YFQ2 88 aa3.55□□□□□ -1.84
SNHG1-211ENST00000539921 CENPEQ02224 2701 aa3.55□□□□□ -1.84
SNHG1-211ENST00000539921 UTP20O75691 2785 aaKnown RBP3.54□□□□□ -1.84
SNHG1-211ENST00000539921 ADGRG4Q8IZF6 3080 aa3.54□□□□□ -1.84
SNHG1-211ENST00000539921 NDUFAF8A1L188 74 aa3.54□□□□□ -1.84
SNHG1-211ENST00000539921 PRLHP81277 87 aa3.54□□□□□ -1.84
SNHG1-211ENST00000539921 LUZP6Q538Z0 58 aa3.54□□□□□ -1.84
SNHG1-211ENST00000539921 ABCA12Q86UK0 2595 aa3.54□□□□□ -1.84
SNHG1-211ENST00000539921 NBPF19A0A087WUL8 3843 aa3.53□□□□□ -1.84
SNHG1-211ENST00000539921 KRTAP19-1Q8IUB9 90 aa3.53□□□□□ -1.84
SNHG1-211ENST00000539921 KRTAP13-1Q8IUC0 172 aa3.53□□□□□ -1.84
SNHG1-211ENST00000539921 SPINT4Q6UDR6 99 aa3.52□□□□□ -1.85
SNHG1-211ENST00000539921 Q6ZSA8 131 aa3.52□□□□□ -1.85
SNHG1-211ENST00000539921 TEX15Q9BXT5 2789 aa3.51□□□□□ -1.85
SNHG1-211ENST00000539921 NAV2Q8IVL1 2488 aa3.51□□□□□ -1.85
SNHG1-211ENST00000539921 SPG11Q96JI7 2443 aa3.51□□□□□ -1.85
SNHG1-211ENST00000539921 CRYBG3Q68DQ2 2970 aa3.51□□□□□ -1.85
SNHG1-211ENST00000539921 PSORS1C2Q9UIG4 136 aa3.51□□□□□ -1.85
SNHG1-211ENST00000539921 MYO9AB2RTY4 2548 aa3.51□□□□□ -1.85
SNHG1-211ENST00000539921 DCHS2Q6V1P9 2916 aa3.51□□□□□ -1.85
SNHG1-211ENST00000539921 CELSR2Q9HCU4 2923 aa3.51□□□□□ -1.85
SNHG1-211ENST00000539921 LRBAP50851 2863 aa3.5□□□□□ -1.85
SNHG1-211ENST00000539921 APCP25054 2843 aa3.5□□□□□ -1.85
SNHG1-211ENST00000539921 FBN2P35556 2912 aa3.5□□□□□ -1.85
SNHG1-211ENST00000539921 IGLV9-49A0A0B4J1Y8 123 aa3.5□□□□□ -1.85
SNHG1-211ENST00000539921 A0A1B0GU33 70 aa3.5□□□□□ -1.85
SNHG1-211ENST00000539921 ITPR2Q14571 2701 aa3.5□□□□□ -1.85
SNHG1-211ENST00000539921 CSMD1Q96PZ7 3565 aa3.5□□□□□ -1.85
SNHG1-211ENST00000539921 TLN2Q9Y4G6 2542 aa3.49□□□□□ -1.85
SNHG1-211ENST00000539921 OTOGQ6ZRI0 2925 aa3.49□□□□□ -1.85
SNHG1-211ENST00000539921 DEFB135Q30KP9 77 aa3.49□□□□□ -1.85
SNHG1-211ENST00000539921 H1FX-AS1Q4G0G2 97 aa3.49□□□□□ -1.85
SNHG1-211ENST00000539921 CSMD2Q7Z408 3487 aa3.49□□□□□ -1.85
SNHG1-211ENST00000539921 NOTCH2Q04721 2471 aa3.48□□□□□ -1.85
SNHG1-211ENST00000539921 K7EIL1 84 aa3.48□□□□□ -1.85
SNHG1-211ENST00000539921 C14orf177Q52M58 125 aa3.48□□□□□ -1.85
SNHG1-211ENST00000539921 SSBP3-AS1Q7Z2R9 100 aa3.48□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms