RNA–Protein interactions for RNA: ENST00000538545.6

ACTN1-205, Transcript of actinin alpha 1, humanhuman

TSL 1 (best) BASIC

Gene ACTN1, Length 2,813 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-205ENST00000538545 H3BQ85 93 aa8.69□□□□□ -1.02
ACTN1-205ENST00000538545 HIST1H4AP62805 103 aaKnown RBP8.69□□□□□ -1.02
ACTN1-205ENST00000538545 UBL5Q9BZL1 73 aa8.69□□□□□ -1.02
ACTN1-205ENST00000538545 C1orf137Q5JT78 98 aa8.69□□□□□ -1.02
ACTN1-205ENST00000538545 A0A1W2PNM2 257 aa8.68□□□□□ -1.02
ACTN1-205ENST00000538545 PSORS1C2Q9UIG4 136 aa8.68□□□□□ -1.02
ACTN1-205ENST00000538545 SMIM20Q8N5G0 67 aa8.67□□□□□ -1.02
ACTN1-205ENST00000538545 BCE1O60756 84 aa8.67□□□□□ -1.02
ACTN1-205ENST00000538545 Q6JHZ5 121 aa8.67□□□□□ -1.02
ACTN1-205ENST00000538545 Q6Q795 121 aa8.67□□□□□ -1.02
ACTN1-205ENST00000538545 ANAPC13Q9BS18 74 aa8.66□□□□□ -1.02
ACTN1-205ENST00000538545 ANAPC11Q9NYG5 84 aa8.66□□□□□ -1.02
ACTN1-205ENST00000538545 PDE6GP18545 87 aa8.65□□□□□ -1.03
ACTN1-205ENST00000538545 KRTAP13-1Q8IUC0 172 aa8.65□□□□□ -1.03
ACTN1-205ENST00000538545 KRTAP10-1P60331 282 aa8.64□□□□□ -1.03
ACTN1-205ENST00000538545 Q8N9L7 120 aa8.64□□□□□ -1.03
ACTN1-205ENST00000538545 PLAC8Q9NZF1 115 aa8.64□□□□□ -1.03
ACTN1-205ENST00000538545 CIRBP-AS1Q8TBR5 109 aa8.64□□□□□ -1.03
ACTN1-205ENST00000538545 PKIGQ9Y2B9 76 aa8.64□□□□□ -1.03
ACTN1-205ENST00000538545 IGFL1Q6UW32 110 aa8.63□□□□□ -1.03
ACTN1-205ENST00000538545 F8WEM9 126 aa8.61□□□□□ -1.03
ACTN1-205ENST00000538545 IMUPQ9GZP8 106 aa8.61□□□□□ -1.03
ACTN1-205ENST00000538545 C5orf47Q569G3 176 aa8.6□□□□□ -1.03
ACTN1-205ENST00000538545 IGLV9-49A0A0B4J1Y8 123 aa8.59□□□□□ -1.03
ACTN1-205ENST00000538545 H0Y9J4 135 aa8.59□□□□□ -1.03
ACTN1-205ENST00000538545 DEFB116Q30KQ4 102 aa8.59□□□□□ -1.03
ACTN1-205ENST00000538545 Q8NBF4 154 aa8.58□□□□□ -1.04
ACTN1-205ENST00000538545 NREPQ16612 68 aa8.58□□□□□ -1.04
ACTN1-205ENST00000538545 CCDC179H3BU77 68 aa8.58□□□□□ -1.04
ACTN1-205ENST00000538545 VPS13BQ7Z7G8 4022 aa8.57□□□□□ -1.04
ACTN1-205ENST00000538545 BPY2O14599 106 aa8.56□□□□□ -1.04
ACTN1-205ENST00000538545 RYR2Q92736 4967 aa8.56□□□□□ -1.04
ACTN1-205ENST00000538545 A0A087WSZ3 146 aa8.55□□□□□ -1.04
ACTN1-205ENST00000538545 DYNC1H1Q14204 4646 aaKnown RBP8.54□□□□□ -1.04
ACTN1-205ENST00000538545 HRCT1Q6UXD1 115 aa8.54□□□□□ -1.04
ACTN1-205ENST00000538545 SPRR4Q96PI1 79 aa8.54□□□□□ -1.04
ACTN1-205ENST00000538545 ZNF861PO60384 105 aa8.53□□□□□ -1.04
ACTN1-205ENST00000538545 C9orf153Q5TBE3 101 aa8.53□□□□□ -1.04
ACTN1-205ENST00000538545 SPRR1BP22528 89 aa8.52□□□□□ -1.05
ACTN1-205ENST00000538545 ATP5EP2Q5VTU8 51 aa8.52□□□□□ -1.05
ACTN1-205ENST00000538545 CRYGAP11844 174 aa8.51□□□□□ -1.05
ACTN1-205ENST00000538545 LCE6AA0A183 80 aa8.5□□□□□ -1.05
ACTN1-205ENST00000538545 IGLV7-43P04211 117 aa8.5□□□□□ -1.05
ACTN1-205ENST00000538545 FAT1Q14517 4588 aa8.5□□□□□ -1.05
ACTN1-205ENST00000538545 Q6ZSA8 131 aa8.49□□□□□ -1.05
ACTN1-205ENST00000538545 IGLV8-61A0A075B6I0 122 aa8.49□□□□□ -1.05
ACTN1-205ENST00000538545 CXCL6P80162 114 aa8.49□□□□□ -1.05
ACTN1-205ENST00000538545 MOBPQ13875 183 aa8.48□□□□□ -1.05
ACTN1-205ENST00000538545 IGKV4-1P06312 121 aa8.47□□□□□ -1.05
ACTN1-205ENST00000538545 RPL37AP61513 92 aaKnown RBP8.47□□□□□ -1.05
ACTN1-205ENST00000538545 RYR3Q15413 4870 aa8.46□□□□□ -1.05
ACTN1-205ENST00000538545 DSCR10P59022 87 aa8.45□□□□□ -1.06
ACTN1-205ENST00000538545 K7EQZ3 153 aa8.44□□□□□ -1.06
ACTN1-205ENST00000538545 ATOX1O00244 68 aa8.44□□□□□ -1.06
ACTN1-205ENST00000538545 SMR3BP02814 79 aaPredicted RBP8.44□□□□□ -1.06
ACTN1-205ENST00000538545 LINC00483Q53H64 154 aa8.43□□□□□ -1.06
ACTN1-205ENST00000538545 CYSTM1Q9H1C7 97 aa8.43□□□□□ -1.06
ACTN1-205ENST00000538545 APOBP04114 4563 aaKnown RBP8.4□□□□□ -1.06
ACTN1-205ENST00000538545 A0A087X002 238 aa8.39□□□□□ -1.07
ACTN1-205ENST00000538545 ZNF706Q9Y5V0 76 aaPredicted RBP8.39□□□□□ -1.07
ACTN1-205ENST00000538545 COX7CP15954 63 aa8.38□□□□□ -1.07
ACTN1-205ENST00000538545 A0A1B0GVY2 172 aa8.36□□□□□ -1.07
ACTN1-205ENST00000538545 A0A1B0GW54 56 aa8.36□□□□□ -1.07
ACTN1-205ENST00000538545 SERP2Q8N6R1 65 aa8.36□□□□□ -1.07
ACTN1-205ENST00000538545 UQCRQO14949 82 aa8.35□□□□□ -1.07
ACTN1-205ENST00000538545 SEC61GP60059 68 aa8.35□□□□□ -1.07
ACTN1-205ENST00000538545 WFDC13Q8IUB5 93 aa8.34□□□□□ -1.07
ACTN1-205ENST00000538545 LINC00472Q9H8W2 130 aa8.34□□□□□ -1.07
ACTN1-205ENST00000538545 KRTAP13-2Q52LG2 175 aa8.32□□□□□ -1.08
ACTN1-205ENST00000538545 LINC00336Q6ZUF6 198 aa8.32□□□□□ -1.08
ACTN1-205ENST00000538545 C20orf197Q8N268 126 aa8.31□□□□□ -1.08
ACTN1-205ENST00000538545 Q96NJ1 140 aa8.3□□□□□ -1.08
ACTN1-205ENST00000538545 SNURFQ9Y675 71 aa8.3□□□□□ -1.08
ACTN1-205ENST00000538545 KRTAP1-4P0C5Y4 121 aa8.29□□□□□ -1.08
ACTN1-205ENST00000538545 SPINK6Q6UWN8 80 aa8.29□□□□□ -1.08
ACTN1-205ENST00000538545 TRAV7A0A075B6U4 112 aa8.26□□□□□ -1.09
ACTN1-205ENST00000538545 HCG22E2RYF7 251 aa8.25□□□□□ -1.09
ACTN1-205ENST00000538545 OCR1Q9BZK8 76 aa8.25□□□□□ -1.09
ACTN1-205ENST00000538545 PLA2G1BP04054 148 aaKnown RBP8.24□□□□□ -1.09
ACTN1-205ENST00000538545 A8MWP4 228 aa8.24□□□□□ -1.09
ACTN1-205ENST00000538545 PRR15Q8IV56 129 aa8.24□□□□□ -1.09
ACTN1-205ENST00000538545 NOTCH2NLQ7Z3S9 236 aa8.23□□□□□ -1.09
ACTN1-205ENST00000538545 IGHV6-1A0A0B4J1U7 121 aa8.21□□□□□ -1.1
ACTN1-205ENST00000538545 PRR26Q8N8Z3 221 aa8.2□□□□□ -1.1
ACTN1-205ENST00000538545 LRP1Q07954 4544 aaKnown RBP8.19□□□□□ -1.1
ACTN1-205ENST00000538545 KIAA1109Q2LD37 5005 aa8.19□□□□□ -1.1
ACTN1-205ENST00000538545 CASC2Q6XLA1 102 aa8.18□□□□□ -1.1
ACTN1-205ENST00000538545 SSBP3-AS1Q7Z2R9 100 aa8.18□□□□□ -1.1
ACTN1-205ENST00000538545 EPPK1P58107 5090 aaKnown RBP8.18□□□□□ -1.1
ACTN1-205ENST00000538545 HSPG2P98160 4391 aa8.18□□□□□ -1.1
ACTN1-205ENST00000538545 KRTAP29-1A8MX34 341 aaPredicted RBP8.17□□□□□ -1.1
ACTN1-205ENST00000538545 MMP24-AS1A0A0U1RRL7 71 aa8.17□□□□□ -1.1
ACTN1-205ENST00000538545 KRTAP10-4P60372 401 aaPredicted RBP8.16□□□□□ -1.1
ACTN1-205ENST00000538545 TMEM254Q8TBM7 123 aa8.16□□□□□ -1.1
ACTN1-205ENST00000538545 FLG2Q5D862 2391 aaPredicted RBP8.16□□□□□ -1.1
ACTN1-205ENST00000538545 NDUFB1O75438 58 aa8.15□□□□□ -1.11
ACTN1-205ENST00000538545 TYMSOSQ8TAI1 123 aa8.15□□□□□ -1.11
ACTN1-205ENST00000538545 J3KT08 172 aa8.13□□□□□ -1.11
ACTN1-205ENST00000538545 FAM229BQ4G0N7 80 aa8.13□□□□□ -1.11
ACTN1-205ENST00000538545 V9GYY9 64 aa8.13□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 43 ms