RNA–Protein interactions for RNA: ENST00000538545.6

ACTN1-205, Transcript of actinin alpha 1, humanhuman

TSL 1 (best) BASIC

Gene ACTN1, Length 2,813 nt, Biotype protein coding, Subcellular localisation Nucleus .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-205ENST00000538545 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP13.74□□□□□ -0.215e-8■■■■■ 204.6
ACTN1-205ENST00000538545 UTP3Q9NQZ2 479 aaKnown RBP eCLIP15.54■□□□□ 0.082e-13■■■■■ 158.6
ACTN1-205ENST00000538545 SF3B1O75533 1304 aaKnown RBP eCLIP14.53□□□□□ -0.083e-6■■■■■ 155
ACTN1-205ENST00000538545 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP14.74□□□□□ -0.052e-6■■■■■ 54.4
ACTN1-205ENST00000538545 DKC1O60832 514 aaKnown RBP eCLIP15.35■□□□□ 0.051e-7■■■■■ 54.2
ACTN1-205ENST00000538545 EWSR1Q01844 656 aaKnown RBP eCLIP11.67□□□□□ -0.541e-13■■■■■ 50.4
ACTN1-205ENST00000538545 SF3B4Q15427 424 aaKnown RBP eCLIP12.2□□□□□ -0.461e-25■■■■■ 49.5
ACTN1-205ENST00000538545 EIF4G2P78344 907 aaKnown RBP eCLIP19.96■□□□□ 0.796e-7■■■■■ 48.9
ACTN1-205ENST00000538545 DDX24Q9GZR7 859 aaKnown RBP eCLIP16.79■□□□□ 0.285e-6■■■■■ 34.6
ACTN1-205ENST00000538545 SF3A3Q12874 501 aaKnown RBP eCLIP14.7□□□□□ -0.064e-7■■■■■ 34.5
ACTN1-205ENST00000538545 XPO5Q9HAV4 1204 aaKnown RBP eCLIP16.09■□□□□ 0.176e-7■■■■■ 31.5
ACTN1-205ENST00000538545 TBRG4Q969Z0 631 aaKnown RBP eCLIP13.95□□□□□ -0.181e-6■■■■■ 31.4
ACTN1-205ENST00000538545 PTBP1P26599 531 aaKnown RBP eCLIP12.38□□□□□ -0.431e-7■■■■■ 30.8
ACTN1-205ENST00000538545 AQRO60306 1485 aaKnown RBP eCLIP21.82■■□□□ 1.084e-7■■■■■ 30.8
ACTN1-205ENST00000538545 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP14.66□□□□□ -0.061e-6■■■■■ 30.4
ACTN1-205ENST00000538545 RBM15Q96T37 977 aaKnown RBP eCLIP14.71□□□□□ -0.058e-6■■■■■ 30.1
ACTN1-205ENST00000538545 METAP2P50579 478 aaKnown RBP eCLIP16.56■□□□□ 0.241e-7■■■■■ 29
ACTN1-205ENST00000538545 SLTMQ9NWH9 1034 aaKnown RBP eCLIP14.82□□□□□ -0.047e-7■■■■□ 25.5
ACTN1-205ENST00000538545 SRSF7Q16629 238 aaKnown RBP eCLIP11.79□□□□□ -0.523e-14■■■■□ 24.7
ACTN1-205ENST00000538545 HNRNPMP52272 730 aaKnown RBP eCLIP20.56■□□□□ 0.881e-6■■■■□ 24.2
ACTN1-205ENST00000538545 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP14.23□□□□□ -0.135e-7■■■■□ 24
ACTN1-205ENST00000538545 MATR3P43243 847 aaKnown RBP eCLIP15.34■□□□□ 0.052e-6■■■■□ 22.4
ACTN1-205ENST00000538545 FXR2P51116 673 aaKnown RBP eCLIP15.86■□□□□ 0.131e-6■■■■□ 21.1
ACTN1-205ENST00000538545 SFPQP23246 707 aaKnown RBP eCLIP15.81■□□□□ 0.127e-7■■■■□ 21
ACTN1-205ENST00000538545 EFTUD2Q15029 972 aaKnown RBP eCLIP14.66□□□□□ -0.062e-6■■■■□ 20.8
ACTN1-205ENST00000538545 SUGP2Q8IX01 1082 aaKnown RBP eCLIP18.85■□□□□ 0.612e-7■■■■□ 20.7
ACTN1-205ENST00000538545 TIAL1Q01085 375 aaKnown RBP eCLIP14.15□□□□□ -0.144e-6■■■□□ 18.3
ACTN1-205ENST00000538545 PCBP2Q15366 365 aaKnown RBP eCLIP13.83□□□□□ -0.22e-6■■■□□ 17.9
ACTN1-205ENST00000538545 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP11.42□□□□□ -0.585e-7■■■□□ 17.7
ACTN1-205ENST00000538545 FMR1Q06787 632 aaKnown RBP eCLIP16.04■□□□□ 0.164e-6■■■□□ 17.6
ACTN1-205ENST00000538545 PRPF4O43172 522 aaKnown RBP eCLIP14.39□□□□□ -0.118e-7■■■□□ 17.4
ACTN1-205ENST00000538545 PUM1Q14671 1186 aaKnown RBP eCLIP13.32□□□□□ -0.285e-6■■■□□ 17
ACTN1-205ENST00000538545 YBX3P16989 372 aaKnown RBP eCLIP15.83■□□□□ 0.129e-8■■■□□ 15.8
ACTN1-205ENST00000538545 NOL12Q9UGY1 213 aaKnown RBP eCLIP15.63■□□□□ 0.092e-6■■■□□ 15.7
ACTN1-205ENST00000538545 BUD13Q9BRD0 619 aaKnown RBP eCLIP15.06■□□□□ 05e-7■■■□□ 15.3
ACTN1-205ENST00000538545 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP17.63■□□□□ 0.417e-7■■■□□ 15.2
ACTN1-205ENST00000538545 U2AF2P26368 475 aaKnown RBP eCLIP16.33■□□□□ 0.21e-13■■■□□ 15
ACTN1-205ENST00000538545 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP15.62■□□□□ 0.094e-9■■□□□ 14.3
ACTN1-205ENST00000538545 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP12.47□□□□□ -0.411e-6■■□□□ 14.2
ACTN1-205ENST00000538545 RBFOX2O43251 390 aaKnown RBP eCLIP11.47□□□□□ -0.572e-6■■□□□ 13.9
ACTN1-205ENST00000538545 NKRFO15226 690 aaKnown RBP eCLIP15.88■□□□□ 0.131e-6■■□□□ 13.9
ACTN1-205ENST00000538545 RPS3P23396 243 aaKnown RBP eCLIP13.89□□□□□ -0.196e-7■■□□□ 13.4
ACTN1-205ENST00000538545 ZNF800Q2TB10 664 aaPredicted RBP eCLIP12.66□□□□□ -0.384e-6■■□□□ 13.3
ACTN1-205ENST00000538545 HNRNPUQ00839 825 aaKnown RBP eCLIP19.43■□□□□ 0.73e-7■■□□□ 13
ACTN1-205ENST00000538545 G3BP1Q13283 466 aaKnown RBP eCLIP17.32■□□□□ 0.367e-8■■□□□ 12.9
ACTN1-205ENST00000538545 RBM22Q9NW64 420 aaKnown RBP eCLIP14.43□□□□□ -0.12e-6■■□□□ 12.7
ACTN1-205ENST00000538545 HNRNPLP14866 589 aaKnown RBP eCLIP14.14□□□□□ -0.156e-6■■□□□ 12.3
ACTN1-205ENST00000538545 XRN2Q9H0D6 950 aaKnown RBP eCLIP14.71□□□□□ -0.056e-7■■□□□ 11.8
ACTN1-205ENST00000538545 PPIGQ13427 754 aaKnown RBP eCLIP14.2□□□□□ -0.149e-12■□□□□ 11
ACTN1-205ENST00000538545 LIN28BQ6ZN17 250 aaKnown RBP eCLIP14.63□□□□□ -0.073e-6■□□□□ 10.9
ACTN1-205ENST00000538545 GRWD1Q9BQ67 446 aaKnown RBP eCLIP20.24■□□□□ 0.835e-7■□□□□ 10.3
ACTN1-205ENST00000538545 ZNF622Q969S3 477 aaKnown RBP eCLIP16.55■□□□□ 0.249e-7■□□□□ 10.1
ACTN1-205ENST00000538545 SDAD1Q9NVU7 687 aaKnown RBP eCLIP13.99□□□□□ -0.171e-7■□□□□ 10.1
ACTN1-205ENST00000538545 NOLC1Q14978 699 aaKnown RBP eCLIP15.91■□□□□ 0.148e-10■□□□□ 9.7
ACTN1-205ENST00000538545 SND1Q7KZF4 910 aaKnown RBP eCLIP15.04■□□□□ -05e-7■□□□□ 8.3
Retrieved 55 of 55 RNA–protein pairs in 15.6 ms