RNA–Protein interactions for RNA: ENST00000535375.1

PRKDC-205, Transcript of protein kinase, DNA-activated, catalytic subunit, humanhuman

TSL 3

Gene PRKDC, Length 464 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKDC-205ENST00000535375 GOLGA4Q13439 2230 aaKnown RBP-0.14□□□□□ -2.43
PRKDC-205ENST00000535375 TIAM1Q13009 1591 aa-0.14□□□□□ -2.43
PRKDC-205ENST00000535375 ERVK-7P63135 1459 aa-0.14□□□□□ -2.43
PRKDC-205ENST00000535375 RAPGEF2Q9Y4G8 1499 aa-0.14□□□□□ -2.43
PRKDC-205ENST00000535375 TRBV7-4A0A0J9YYF1 115 aa-0.14□□□□□ -2.43
PRKDC-205ENST00000535375 A0A1B0GWA3 101 aa-0.14□□□□□ -2.43
PRKDC-205ENST00000535375 COX6B1P14854 86 aa-0.14□□□□□ -2.43
PRKDC-205ENST00000535375 SEC11AP67812 179 aa-0.14□□□□□ -2.43
PRKDC-205ENST00000535375 LCN9Q8WX39 176 aa-0.14□□□□□ -2.43
PRKDC-205ENST00000535375 TCEAL7Q9BRU2 100 aa-0.14□□□□□ -2.43
PRKDC-205ENST00000535375 KNDC1Q76NI1 1749 aa-0.14□□□□□ -2.43
PRKDC-205ENST00000535375 SAMD9Q5K651 1589 aa-0.15□□□□□ -2.43
PRKDC-205ENST00000535375 KIAA1551Q9HCM1 1747 aa-0.15□□□□□ -2.43
PRKDC-205ENST00000535375 FXYD6-FXYD2A0A087WZ82 144 aa-0.15□□□□□ -2.43
PRKDC-205ENST00000535375 TMEM218A2RU14 115 aa-0.15□□□□□ -2.43
PRKDC-205ENST00000535375 SPRR1BP22528 89 aa-0.15□□□□□ -2.43
PRKDC-205ENST00000535375 MT1HP80294 61 aa-0.15□□□□□ -2.43
PRKDC-205ENST00000535375 PRO1933Q9H354 126 aa-0.15□□□□□ -2.43
PRKDC-205ENST00000535375 MAGI3Q5TCQ9 1506 aa-0.15□□□□□ -2.43
PRKDC-205ENST00000535375 RGPD3A6NKT7 1758 aaPredicted RBP-0.15□□□□□ -2.43
PRKDC-205ENST00000535375 RGPD4Q7Z3J3 1758 aa-0.15□□□□□ -2.43
PRKDC-205ENST00000535375 IQGAP1P46940 1657 aa-0.15□□□□□ -2.43
PRKDC-205ENST00000535375 PARP4Q9UKK3 1724 aaKnown RBP-0.16□□□□□ -2.43
PRKDC-205ENST00000535375 TRAV30A0A087WSZ9 112 aa-0.16□□□□□ -2.44
PRKDC-205ENST00000535375 PRM1P04553 51 aa-0.16□□□□□ -2.44
PRKDC-205ENST00000535375 TIAM2Q8IVF5 1701 aa-0.16□□□□□ -2.44
PRKDC-205ENST00000535375 ATP7BP35670 1465 aa-0.16□□□□□ -2.44
PRKDC-205ENST00000535375 DUOX2Q9NRD8 1548 aa-0.17□□□□□ -2.44
PRKDC-205ENST00000535375 TOGARAM1Q9Y4F4 1720 aa-0.17□□□□□ -2.44
PRKDC-205ENST00000535375 RICTORQ6R327 1708 aa-0.18□□□□□ -2.44
PRKDC-205ENST00000535375 ATP6V1G2-DDX39BF2Z307 99 aa-0.18□□□□□ -2.44
PRKDC-205ENST00000535375 KRTAP19-7Q3SYF9 63 aa-0.18□□□□□ -2.44
PRKDC-205ENST00000535375 PLXNC1O60486 1568 aa-0.19□□□□□ -2.44
PRKDC-205ENST00000535375 K7EQZ3 153 aa-0.19□□□□□ -2.44
PRKDC-205ENST00000535375 NDUFC1O43677 76 aa-0.19□□□□□ -2.44
PRKDC-205ENST00000535375 MT-ATP8P03928 68 aa-0.19□□□□□ -2.44
PRKDC-205ENST00000535375 RBP2P50120 134 aa-0.19□□□□□ -2.44
PRKDC-205ENST00000535375 NEXMIFQ5QGS0 1516 aa-0.19□□□□□ -2.44
PRKDC-205ENST00000535375 MYO3AQ8NEV4 1616 aa-0.2□□□□□ -2.44
PRKDC-205ENST00000535375 EIF2AK4Q9P2K8 1649 aaKnown RBP-0.2□□□□□ -2.44
PRKDC-205ENST00000535375 XRN1Q8IZH2 1706 aaKnown RBP-0.2□□□□□ -2.44
PRKDC-205ENST00000535375 GNGT2O14610 69 aa-0.2□□□□□ -2.44
PRKDC-205ENST00000535375 KRTAP19-2Q3LHN2 52 aa-0.2□□□□□ -2.44
PRKDC-205ENST00000535375 FDCSPQ8NFU4 85 aa-0.2□□□□□ -2.44
PRKDC-205ENST00000535375 CACFD1Q9UGQ2 172 aa-0.2□□□□□ -2.44
PRKDC-205ENST00000535375 LMTK2Q8IWU2 1503 aa-0.2□□□□□ -2.44
PRKDC-205ENST00000535375 DEPDC5O75140 1603 aa-0.2□□□□□ -2.44
PRKDC-205ENST00000535375 UBR3Q6ZT12 1888 aa-0.2□□□□□ -2.44
PRKDC-205ENST00000535375 LRRC9Q6ZRR7 1453 aa-0.21□□□□□ -2.44
PRKDC-205ENST00000535375 TRBV25-1A0A075B6N4 114 aa-0.21□□□□□ -2.44
PRKDC-205ENST00000535375 H7BZZ5 65 aa-0.21□□□□□ -2.44
PRKDC-205ENST00000535375 SCRIBQ14160 1630 aa-0.22□□□□□ -2.44
PRKDC-205ENST00000535375 A0A087WVE0 104 aa-0.22□□□□□ -2.44
PRKDC-205ENST00000535375 A0A0G2JND7 137 aa-0.22□□□□□ -2.44
PRKDC-205ENST00000535375 DDX60Q8IY21 1712 aaKnown RBP-0.22□□□□□ -2.44
PRKDC-205ENST00000535375 ANKRD36BQ8N2N9 1353 aa-0.22□□□□□ -2.45
PRKDC-205ENST00000535375 NLRP1Q9C000 1473 aa-0.22□□□□□ -2.45
PRKDC-205ENST00000535375 CLTCL1P53675 1640 aa-0.23□□□□□ -2.45
PRKDC-205ENST00000535375 C7orf77A4D0Y5 90 aa-0.23□□□□□ -2.45
PRKDC-205ENST00000535375 S100A10P60903 97 aa-0.23□□□□□ -2.45
PRKDC-205ENST00000535375 ACBD7Q8N6N7 88 aa-0.23□□□□□ -2.45
PRKDC-205ENST00000535375 CNTLNQ9NXG0 1405 aa-0.23□□□□□ -2.45
PRKDC-205ENST00000535375 SAMD9LQ8IVG5 1584 aa-0.23□□□□□ -2.45
PRKDC-205ENST00000535375 DNAJC13O75165 2243 aa-0.23□□□□□ -2.45
PRKDC-205ENST00000535375 QSER1Q2KHR3 1735 aa-0.24□□□□□ -2.45
PRKDC-205ENST00000535375 MPC2O95563 127 aa-0.24□□□□□ -2.45
PRKDC-205ENST00000535375 MT1HL1P0DM35 61 aa-0.24□□□□□ -2.45
PRKDC-205ENST00000535375 KRTAP19-8Q3LI54 63 aa-0.24□□□□□ -2.45
PRKDC-205ENST00000535375 KRTAP6-2Q3LI66 62 aa-0.24□□□□□ -2.45
PRKDC-205ENST00000535375 TRGV9Q99603 122 aa-0.24□□□□□ -2.45
PRKDC-205ENST00000535375 CCDC88BA6NC98 1476 aa-0.24□□□□□ -2.45
PRKDC-205ENST00000535375 ABCC2Q92887 1545 aa-0.24□□□□□ -2.45
PRKDC-205ENST00000535375 KIF1AQ12756 1690 aa-0.24□□□□□ -2.45
PRKDC-205ENST00000535375 ATP10BO94823 1461 aa-0.25□□□□□ -2.45
PRKDC-205ENST00000535375 M0R2T5 61 aa-0.26□□□□□ -2.45
PRKDC-205ENST00000535375 PMCHL1Q16048 86 aa-0.26□□□□□ -2.45
PRKDC-205ENST00000535375 PMCHL2Q9BQD1 86 aa-0.26□□□□□ -2.45
PRKDC-205ENST00000535375 PDCD11Q14690 1871 aaKnown RBP-0.27□□□□□ -2.45
PRKDC-205ENST00000535375 NRAPQ86VF7 1730 aa-0.27□□□□□ -2.45
PRKDC-205ENST00000535375 ABCA5Q8WWZ7 1642 aa-0.27□□□□□ -2.45
PRKDC-205ENST00000535375 NFAT5O94916 1531 aa-0.27□□□□□ -2.45
PRKDC-205ENST00000535375 CLIP1P30622 1438 aa-0.27□□□□□ -2.45
PRKDC-205ENST00000535375 LOC730098B7Z3J9 87 aa-0.27□□□□□ -2.45
PRKDC-205ENST00000535375 ATOX1O00244 68 aa-0.27□□□□□ -2.45
PRKDC-205ENST00000535375 SPINK4O60575 86 aa-0.27□□□□□ -2.45
PRKDC-205ENST00000535375 KLK9Q2XQG4 91 aa-0.27□□□□□ -2.45
PRKDC-205ENST00000535375 PSMG4Q5JS54 123 aa-0.27□□□□□ -2.45
PRKDC-205ENST00000535375 SERP2Q8N6R1 65 aa-0.27□□□□□ -2.45
PRKDC-205ENST00000535375 VAMP8Q9BV40 100 aa-0.27□□□□□ -2.45
PRKDC-205ENST00000535375 MON2Q7Z3U7 1717 aa-0.27□□□□□ -2.45
PRKDC-205ENST00000535375 ALS2Q96Q42 1657 aa-0.27□□□□□ -2.45
PRKDC-205ENST00000535375 FANCAO15360 1455 aa-0.28□□□□□ -2.45
PRKDC-205ENST00000535375 FYCO1Q9BQS8 1478 aa-0.28□□□□□ -2.45
PRKDC-205ENST00000535375 MT1FP04733 61 aa-0.28□□□□□ -2.45
PRKDC-205ENST00000535375 KRTAP8-1Q8IUC2 63 aa-0.28□□□□□ -2.45
PRKDC-205ENST00000535375 DEFB105AQ8NG35 78 aa-0.28□□□□□ -2.45
PRKDC-205ENST00000535375 USMG5Q96IX5 58 aa-0.28□□□□□ -2.45
PRKDC-205ENST00000535375 DDX60LQ5H9U9 1706 aaKnown RBP-0.28□□□□□ -2.45
PRKDC-205ENST00000535375 EFCAB5A4FU69 1503 aa-0.28□□□□□ -2.45
PRKDC-205ENST00000535375 HFM1A2PYH4 1435 aa-0.29□□□□□ -2.46
Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms