RNA–Protein interactions for RNA: ENST00000535327.5

CCDC7-207, Transcript of coiled-coil domain containing 7, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CCDC7, Length 700 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC7-207ENST00000535327 RBP2P50120 134 aa-1.39□□□□□ -2.63
CCDC7-207ENST00000535327 PRO3102Q9H379 93 aa-1.39□□□□□ -2.63
CCDC7-207ENST00000535327 ATP7BP35670 1465 aa-1.39□□□□□ -2.63
CCDC7-207ENST00000535327 ATP6V1G2-DDX39BF2Z307 99 aa-1.4□□□□□ -2.63
CCDC7-207ENST00000535327 DEFA5Q01523 94 aa-1.4□□□□□ -2.63
CCDC7-207ENST00000535327 COL12A1Q99715 3063 aa-1.4□□□□□ -2.63
CCDC7-207ENST00000535327 RGPD1P0DJD0 1748 aa-1.4□□□□□ -2.63
CCDC7-207ENST00000535327 LRRK2Q5S007 2527 aa-1.41□□□□□ -2.63
CCDC7-207ENST00000535327 PEA15Q15121 130 aa-1.41□□□□□ -2.64
CCDC7-207ENST00000535327 SCN11AQ9UI33 1791 aa-1.42□□□□□ -2.64
CCDC7-207ENST00000535327 FAM186AA6NE01 2351 aa-1.42□□□□□ -2.64
CCDC7-207ENST00000535327 DYNC1H1Q14204 4646 aaKnown RBP-1.42□□□□□ -2.64
CCDC7-207ENST00000535327 LINC00158P58513 81 aa-1.42□□□□□ -2.64
CCDC7-207ENST00000535327 KRTAP19-5Q3LI72 72 aa-1.42□□□□□ -2.64
CCDC7-207ENST00000535327 RGPD3A6NKT7 1758 aaPredicted RBP-1.43□□□□□ -2.64
CCDC7-207ENST00000535327 RGPD4Q7Z3J3 1758 aa-1.43□□□□□ -2.64
CCDC7-207ENST00000535327 GYPAP02724 150 aa-1.43□□□□□ -2.64
CCDC7-207ENST00000535327 S4R3F8 94 aa-1.43□□□□□ -2.64
CCDC7-207ENST00000535327 SUPT6HQ7KZ85 1726 aaKnown RBP-1.43□□□□□ -2.64
CCDC7-207ENST00000535327 C5orf42Q9H799 3197 aa-1.44□□□□□ -2.64
CCDC7-207ENST00000535327 WIZO95785 1651 aa-1.44□□□□□ -2.64
CCDC7-207ENST00000535327 TRAV21A0A0B4J279 112 aa-1.44□□□□□ -2.64
CCDC7-207ENST00000535327 NCMAPQ5T1S8 102 aa-1.44□□□□□ -2.64
CCDC7-207ENST00000535327 WFDC9Q8NEX5 89 aa-1.44□□□□□ -2.64
CCDC7-207ENST00000535327 USP32Q8NFA0 1604 aa-1.44□□□□□ -2.64
CCDC7-207ENST00000535327 M0R143 59 aa-1.45□□□□□ -2.64
CCDC7-207ENST00000535327 PRLHP81277 87 aa-1.45□□□□□ -2.64
CCDC7-207ENST00000535327 ACACBO00763 2458 aa-1.45□□□□□ -2.64
CCDC7-207ENST00000535327 BAZ1AQ9NRL2 1556 aaPredicted RBP-1.46□□□□□ -2.64
CCDC7-207ENST00000535327 NESP48681 1621 aa-1.46□□□□□ -2.64
CCDC7-207ENST00000535327 K7EP34 96 aa-1.46□□□□□ -2.64
CCDC7-207ENST00000535327 NEXMIFQ5QGS0 1516 aa-1.46□□□□□ -2.64
CCDC7-207ENST00000535327 MYO3AQ8NEV4 1616 aa-1.47□□□□□ -2.64
CCDC7-207ENST00000535327 H0YAA0 97 aa-1.47□□□□□ -2.64
CCDC7-207ENST00000535327 POLR1AO95602 1720 aaPredicted RBP-1.47□□□□□ -2.64
CCDC7-207ENST00000535327 NWD1Q149M9 1564 aa-1.47□□□□□ -2.65
CCDC7-207ENST00000535327 DEPDC5O75140 1603 aa-1.48□□□□□ -2.65
CCDC7-207ENST00000535327 NDUFB1O75438 58 aa-1.48□□□□□ -2.65
CCDC7-207ENST00000535327 DEFB1P60022 68 aa-1.48□□□□□ -2.65
CCDC7-207ENST00000535327 DEFB110Q30KQ9 67 aa-1.48□□□□□ -2.65
CCDC7-207ENST00000535327 C20orf78Q9BR46 151 aa-1.48□□□□□ -2.65
CCDC7-207ENST00000535327 CELSR3Q9NYQ7 3312 aa-1.48□□□□□ -2.65
CCDC7-207ENST00000535327 LTN1O94822 1766 aa-1.49□□□□□ -2.65
CCDC7-207ENST00000535327 CEP290O15078 2479 aa-1.49□□□□□ -2.65
CCDC7-207ENST00000535327 MYMXA0A1B0GTQ4 84 aa-1.5□□□□□ -2.65
CCDC7-207ENST00000535327 CHD7Q9P2D1 2997 aa-1.5□□□□□ -2.65
CCDC7-207ENST00000535327 UBR1Q8IWV7 1749 aa-1.51□□□□□ -2.65
CCDC7-207ENST00000535327 SPENQ96T58 3664 aaKnown RBP-1.51□□□□□ -2.65
CCDC7-207ENST00000535327 SRCAPQ6ZRS2 3230 aa-1.51□□□□□ -2.65
CCDC7-207ENST00000535327 CEP162Q5TB80 1403 aa-1.51□□□□□ -2.65
CCDC7-207ENST00000535327 CEP170BQ9Y4F5 1589 aaPredicted RBP-1.51□□□□□ -2.65
CCDC7-207ENST00000535327 PLIN4Q96Q06 1357 aa-1.52□□□□□ -2.65
CCDC7-207ENST00000535327 ITPR1Q14643 2758 aa-1.52□□□□□ -2.65
CCDC7-207ENST00000535327 BPTFQ12830 3046 aa-1.52□□□□□ -2.65
CCDC7-207ENST00000535327 MAGI3Q5TCQ9 1506 aa-1.52□□□□□ -2.65
CCDC7-207ENST00000535327 ANKRD26Q9UPS8 1709 aa-1.52□□□□□ -2.65
CCDC7-207ENST00000535327 SPTBN5Q9NRC6 3674 aaKnown RBP-1.52□□□□□ -2.65
CCDC7-207ENST00000535327 LCE6AA0A183 80 aa-1.53□□□□□ -2.65
CCDC7-207ENST00000535327 LYNX1G3V0Z9 82 aa-1.53□□□□□ -2.65
CCDC7-207ENST00000535327 MT1XP80297 61 aa-1.53□□□□□ -2.65
CCDC7-207ENST00000535327 ABCC10Q5T3U5 1492 aa-1.53□□□□□ -2.65
CCDC7-207ENST00000535327 DOT1LQ8TEK3 1739 aa-1.53□□□□□ -2.65
CCDC7-207ENST00000535327 IFI6P09912 130 aa-1.54□□□□□ -2.66
CCDC7-207ENST00000535327 SNHG12Q9BXW3 62 aa-1.54□□□□□ -2.66
CCDC7-207ENST00000535327 CSMD1Q96PZ7 3565 aa-1.54□□□□□ -2.66
CCDC7-207ENST00000535327 DYNC2H1Q8NCM8 4307 aaKnown RBP-1.55□□□□□ -2.66
CCDC7-207ENST00000535327 VPS8Q8N3P4 1428 aa-1.55□□□□□ -2.66
CCDC7-207ENST00000535327 CEBPZOSA8MTT3 80 aa-1.55□□□□□ -2.66
CCDC7-207ENST00000535327 SNRPFP62306 86 aaKnown RBP-1.55□□□□□ -2.66
CCDC7-207ENST00000535327 RABAC1Q9UI14 185 aa-1.55□□□□□ -2.66
CCDC7-207ENST00000535327 ACYP1P07311 99 aa-1.56□□□□□ -2.66
CCDC7-207ENST00000535327 DEFB130BP0DP73 79 aa-1.56□□□□□ -2.66
CCDC7-207ENST00000535327 DEFB130AP0DP74 79 aa-1.56□□□□□ -2.66
CCDC7-207ENST00000535327 PYY3Q5JQD4 70 aa-1.56□□□□□ -2.66
CCDC7-207ENST00000535327 LINC00643Q86TS7 51 aa-1.56□□□□□ -2.66
CCDC7-207ENST00000535327 PEG3Q9GZU2 1588 aa-1.56□□□□□ -2.66
CCDC7-207ENST00000535327 CEP295Q9C0D2 2601 aa-1.56□□□□□ -2.66
CCDC7-207ENST00000535327 TRRAPQ9Y4A5 3859 aa-1.57□□□□□ -2.66
CCDC7-207ENST00000535327 IFI27P40305 119 aaPredicted RBP-1.57□□□□□ -2.66
CCDC7-207ENST00000535327 PKIAP61925 76 aa-1.57□□□□□ -2.66
CCDC7-207ENST00000535327 NCOA2Q15596 1464 aa-1.57□□□□□ -2.66
CCDC7-207ENST00000535327 S100A8P05109 93 aa-1.58□□□□□ -2.66
CCDC7-207ENST00000535327 URB2Q14146 1524 aaKnown RBP-1.58□□□□□ -2.66
CCDC7-207ENST00000535327 AKAP12Q02952 1782 aa-1.58□□□□□ -2.66
CCDC7-207ENST00000535327 TLN2Q9Y4G6 2542 aa-1.58□□□□□ -2.66
CCDC7-207ENST00000535327 IAPPP10997 89 aa-1.59□□□□□ -2.66
CCDC7-207ENST00000535327 TMEM131LA2VDJ0 1609 aa-1.59□□□□□ -2.66
CCDC7-207ENST00000535327 COL6A5A8TX70 2615 aa-1.59□□□□□ -2.66
CCDC7-207ENST00000535327 DIP2BQ9P265 1576 aa-1.59□□□□□ -2.66
CCDC7-207ENST00000535327 UMAD1C9J7I0 102 aa-1.6□□□□□ -2.67
CCDC7-207ENST00000535327 SMR3BP02814 79 aaPredicted RBP-1.6□□□□□ -2.67
CCDC7-207ENST00000535327 DEFB106AQ8N104 65 aa-1.6□□□□□ -2.67
CCDC7-207ENST00000535327 LRBAP50851 2863 aa-1.6□□□□□ -2.67
CCDC7-207ENST00000535327 DNAH17Q9UFH2 4485 aa-1.6□□□□□ -2.67
CCDC7-207ENST00000535327 ZNF831Q5JPB2 1677 aa-1.61□□□□□ -2.67
CCDC7-207ENST00000535327 CCDC88BA6NC98 1476 aa-1.61□□□□□ -2.67
CCDC7-207ENST00000535327 ANKRD36CQ5JPF3 1778 aa-1.61□□□□□ -2.67
CCDC7-207ENST00000535327 EYSQ5T1H1 3165 aa-1.61□□□□□ -2.67
CCDC7-207ENST00000535327 SMG1Q96Q15 3661 aaKnown RBP-1.62□□□□□ -2.67
CCDC7-207ENST00000535327 DDX60LQ5H9U9 1706 aaKnown RBP-1.62□□□□□ -2.67
Retrieved 100 of 20,778 RNA–protein pairs in 51.3 ms