RNA–Protein interactions for RNA: ENST00000533333.5

PAX6-228, Transcript of paired box 6, humanhuman

TSL 2

Gene PAX6, Length 6,173 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PAX6-228ENST00000533333 MAST4O15021 2626 aa10.64□□□□□ -0.71
PAX6-228ENST00000533333 LINC00472Q9H8W2 130 aa10.63□□□□□ -0.71
PAX6-228ENST00000533333 SPATA8Q6RVD6 105 aa10.6□□□□□ -0.71
PAX6-228ENST00000533333 SPRR1AP35321 89 aa10.59□□□□□ -0.71
PAX6-228ENST00000533333 OXTP01178 125 aa10.59□□□□□ -0.71
PAX6-228ENST00000533333 Q5XG85 94 aa10.57□□□□□ -0.72
PAX6-228ENST00000533333 SPRR1BP22528 89 aa10.56□□□□□ -0.72
PAX6-228ENST00000533333 KRTAP10-1P60331 282 aa10.55□□□□□ -0.72
PAX6-228ENST00000533333 LCE6AA0A183 80 aa10.54□□□□□ -0.72
PAX6-228ENST00000533333 C20orf166-AS1Q96NR2 134 aa10.53□□□□□ -0.72
PAX6-228ENST00000533333 FLG2Q5D862 2391 aaPredicted RBP10.52□□□□□ -0.73
PAX6-228ENST00000533333 KRTAP26-1Q6PEX3 210 aa10.52□□□□□ -0.73
PAX6-228ENST00000533333 Q8NDZ9 215 aa10.51□□□□□ -0.73
PAX6-228ENST00000533333 CENPFP49454 3210 aa10.5□□□□□ -0.73
PAX6-228ENST00000533333 DNAH12Q6ZR08 3092 aa10.49□□□□□ -0.73
PAX6-228ENST00000533333 KRTAP10-2P60368 255 aa10.48□□□□□ -0.73
PAX6-228ENST00000533333 Q6ZR54 194 aa10.48□□□□□ -0.73
PAX6-228ENST00000533333 CYSTM1Q9H1C7 97 aa10.43□□□□□ -0.74
PAX6-228ENST00000533333 KRTAP16-1A8MUX0 517 aa10.43□□□□□ -0.74
PAX6-228ENST00000533333 KRTAP1-5Q9BYS1 174 aa10.42□□□□□ -0.74
PAX6-228ENST00000533333 PANO1I0J062 215 aa10.41□□□□□ -0.74
PAX6-228ENST00000533333 STAB1Q9NY15 2570 aa10.4□□□□□ -0.75
PAX6-228ENST00000533333 A8MUU9 505 aa10.32□□□□□ -0.76
PAX6-228ENST00000533333 UTRNP46939 3433 aa10.26□□□□□ -0.77
PAX6-228ENST00000533333 ASB16-AS1Q495Z4 193 aa10.26□□□□□ -0.77
PAX6-228ENST00000533333 A0A087X002 238 aa10.23□□□□□ -0.77
PAX6-228ENST00000533333 A8MU10 97 aa10.21□□□□□ -0.78
PAX6-228ENST00000533333 HTTP42858 3142 aa10.2□□□□□ -0.78
PAX6-228ENST00000533333 FLNAP21333 2647 aaKnown RBP10.2□□□□□ -0.78
PAX6-228ENST00000533333 HELZ2Q9BYK8 2649 aaKnown RBP10.2□□□□□ -0.78
PAX6-228ENST00000533333 CEP350Q5VT06 3117 aa10.19□□□□□ -0.78
PAX6-228ENST00000533333 KRTAP25-1Q3LHN0 102 aa10.18□□□□□ -0.78
PAX6-228ENST00000533333 CHD7Q9P2D1 2997 aa10.14□□□□□ -0.79
PAX6-228ENST00000533333 ITPR3Q14573 2671 aa10.14□□□□□ -0.79
PAX6-228ENST00000533333 TNP1P09430 55 aa10.14□□□□□ -0.79
PAX6-228ENST00000533333 C10orf95Q9H7T3 257 aa10.13□□□□□ -0.79
PAX6-228ENST00000533333 CHD9Q3L8U1 2897 aa10.13□□□□□ -0.79
PAX6-228ENST00000533333 PCNTO95613 3336 aa10.11□□□□□ -0.79
PAX6-228ENST00000533333 NOTCH2NLQ7Z3S9 236 aa10.09□□□□□ -0.79
PAX6-228ENST00000533333 KRTAP29-1A8MX34 341 aaPredicted RBP10.09□□□□□ -0.79
PAX6-228ENST00000533333 NDUFAF8A1L188 74 aa10.09□□□□□ -0.79
PAX6-228ENST00000533333 SETXQ7Z333 2677 aaKnown RBP10.07□□□□□ -0.8
PAX6-228ENST00000533333 PRRC2CQ9Y520 2896 aaKnown RBP10.04□□□□□ -0.8
PAX6-228ENST00000533333 TRANK1O15050 2925 aa10.03□□□□□ -0.8
PAX6-228ENST00000533333 KRTAP4-16G5E9R7 235 aaPredicted RBP10.01□□□□□ -0.81
PAX6-228ENST00000533333 RPS29P62273 56 aaKnown RBP10.01□□□□□ -0.81
PAX6-228ENST00000533333 DMBT1Q9UGM3 2413 aaPredicted RBP10□□□□□ -0.81
PAX6-228ENST00000533333 CFAP46Q8IYW2 2715 aa9.95□□□□□ -0.82
PAX6-228ENST00000533333 NBEAL1Q6ZS30 2694 aa9.93□□□□□ -0.82
PAX6-228ENST00000533333 TEP1Q99973 2627 aaKnown RBP9.92□□□□□ -0.82
PAX6-228ENST00000533333 A0A0C4DFX4 3053 aa9.89□□□□□ -0.83
PAX6-228ENST00000533333 A6NN06 94 aa9.89□□□□□ -0.83
PAX6-228ENST00000533333 KRTAP10-8P60410 259 aa9.88□□□□□ -0.83
PAX6-228ENST00000533333 AKAP13Q12802 2813 aa9.88□□□□□ -0.83
PAX6-228ENST00000533333 C5orf42Q9H799 3197 aa9.87□□□□□ -0.83
PAX6-228ENST00000533333 STAB2Q8WWQ8 2551 aa9.84□□□□□ -0.83
PAX6-228ENST00000533333 KRTAP11-1Q8IUC1 163 aa9.83□□□□□ -0.84
PAX6-228ENST00000533333 TEX15Q9BXT5 2789 aa9.8□□□□□ -0.84
PAX6-228ENST00000533333 KRTAP13-2Q52LG2 175 aa9.8□□□□□ -0.84
PAX6-228ENST00000533333 CENPEQ02224 2701 aa9.79□□□□□ -0.84
PAX6-228ENST00000533333 A0A1B0GVY2 172 aa9.75□□□□□ -0.85
PAX6-228ENST00000533333 Q6ZRN7 208 aaPredicted RBP9.74□□□□□ -0.85
PAX6-228ENST00000533333 COL6A5A8TX70 2615 aa9.73□□□□□ -0.85
PAX6-228ENST00000533333 CHD6Q8TD26 2715 aa9.72□□□□□ -0.85
PAX6-228ENST00000533333 NOTCH1P46531 2555 aa9.72□□□□□ -0.85
PAX6-228ENST00000533333 UNC79Q9P2D8 2635 aa9.71□□□□□ -0.85
PAX6-228ENST00000533333 PP632Q6XCG6 107 aa9.69□□□□□ -0.86
PAX6-228ENST00000533333 BRCA2P51587 3418 aa9.65□□□□□ -0.86
PAX6-228ENST00000533333 BAHCC1Q9P281 2608 aa9.61□□□□□ -0.87
PAX6-228ENST00000533333 MKI67P46013 3256 aaKnown RBP9.59□□□□□ -0.87
PAX6-228ENST00000533333 P0C880 135 aa9.57□□□□□ -0.88
PAX6-228ENST00000533333 KRTAP7-1Q8IUC3 87 aa9.57□□□□□ -0.88
PAX6-228ENST00000533333 DNAH14Q0VDD8 3507 aa9.57□□□□□ -0.88
PAX6-228ENST00000533333 KRTAP13-1Q8IUC0 172 aa9.55□□□□□ -0.88
PAX6-228ENST00000533333 RANBP2P49792 3224 aaKnown RBP9.54□□□□□ -0.88
PAX6-228ENST00000533333 KRTAP10-10P60014 251 aa9.54□□□□□ -0.88
PAX6-228ENST00000533333 PRO2289Q9P1D8 64 aa9.53□□□□□ -0.88
PAX6-228ENST00000533333 GCN1Q92616 2671 aaKnown RBP9.45□□□□□ -0.9
PAX6-228ENST00000533333 LAMA3Q16787 3333 aa9.44□□□□□ -0.9
PAX6-228ENST00000533333 XP32Q5T750 250 aa9.43□□□□□ -0.9
PAX6-228ENST00000533333 ZNF292O60281 2723 aa9.35□□□□□ -0.91
PAX6-228ENST00000533333 IGSF10Q6WRI0 2623 aa9.35□□□□□ -0.91
PAX6-228ENST00000533333 CDH23Q9H251 3354 aa9.31□□□□□ -0.92
PAX6-228ENST00000533333 MAP1AP78559 2803 aaPredicted RBP9.29□□□□□ -0.92
PAX6-228ENST00000533333 UBR5O95071 2799 aaPredicted RBP9.28□□□□□ -0.92
PAX6-228ENST00000533333 NSD1Q96L73 2696 aaPredicted RBP9.26□□□□□ -0.93
PAX6-228ENST00000533333 UNC80Q8N2C7 3258 aa9.25□□□□□ -0.93
PAX6-228ENST00000533333 LAMA2P24043 3122 aaKnown RBP9.23□□□□□ -0.93
PAX6-228ENST00000533333 H0YAA0 97 aa9.23□□□□□ -0.93
PAX6-228ENST00000533333 NBEAL2Q6ZNJ1 2754 aa9.23□□□□□ -0.93
PAX6-228ENST00000533333 CFAP54Q96N23 3096 aa9.22□□□□□ -0.93
PAX6-228ENST00000533333 TPRXLQ17RH7 258 aa9.22□□□□□ -0.93
PAX6-228ENST00000533333 KRTAP21-3Q3LHN1 58 aa9.2□□□□□ -0.94
PAX6-228ENST00000533333 SZT2Q5T011 3432 aa9.17□□□□□ -0.94
PAX6-228ENST00000533333 KMT2BQ9UMN6 2715 aaPredicted RBP9.15□□□□□ -0.95
PAX6-228ENST00000533333 KRTAP1-4P0C5Y4 121 aa9.14□□□□□ -0.95
PAX6-228ENST00000533333 TRIOO75962 3097 aa9.14□□□□□ -0.95
PAX6-228ENST00000533333 XIRP2A4UGR9 3374 aa9.13□□□□□ -0.95
PAX6-228ENST00000533333 PRUNE2Q8WUY3 3088 aa9.13□□□□□ -0.95
PAX6-228ENST00000533333 MGAQ8IWI9 3026 aa9.11□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 157.2 ms