RNA–Protein interactions for RNA: ENST00000532844.5

CTNND1-234, Transcript of catenin delta 1, humanhuman

TSL 1 (best) BASIC

Gene CTNND1, Length 6,012 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1-234ENST00000532844 HTTP42858 3142 aa5.03□□□□□ -1.6
CTNND1-234ENST00000532844 FLG2Q5D862 2391 aaPredicted RBP5.03□□□□□ -1.6
CTNND1-234ENST00000532844 CHD9Q3L8U1 2897 aa5.02□□□□□ -1.61
CTNND1-234ENST00000532844 FASNP49327 2511 aaKnown RBP5□□□□□ -1.61
CTNND1-234ENST00000532844 ZCCHC13Q8WW36 166 aaKnown RBP5□□□□□ -1.61
CTNND1-234ENST00000532844 MMP24-AS1A0A0U1RRL7 71 aa4.98□□□□□ -1.61
CTNND1-234ENST00000532844 CR1P17927 2039 aa4.98□□□□□ -1.61
CTNND1-234ENST00000532844 SPRR1AP35321 89 aa4.98□□□□□ -1.61
CTNND1-234ENST00000532844 PLAC8Q9NZF1 115 aa4.95□□□□□ -1.62
CTNND1-234ENST00000532844 LCE6AA0A183 80 aa4.95□□□□□ -1.62
CTNND1-234ENST00000532844 Q5W150 140 aa4.95□□□□□ -1.62
CTNND1-234ENST00000532844 TRANK1O15050 2925 aa4.94□□□□□ -1.62
CTNND1-234ENST00000532844 LAMA2P24043 3122 aaKnown RBP4.94□□□□□ -1.62
CTNND1-234ENST00000532844 CFAP54Q96N23 3096 aa4.93□□□□□ -1.62
CTNND1-234ENST00000532844 NDUFAF8A1L188 74 aa4.92□□□□□ -1.62
CTNND1-234ENST00000532844 M0QZ58 72 aa4.91□□□□□ -1.62
CTNND1-234ENST00000532844 KRTAP26-1Q6PEX3 210 aa4.91□□□□□ -1.62
CTNND1-234ENST00000532844 MKI67P46013 3256 aaKnown RBP4.91□□□□□ -1.62
CTNND1-234ENST00000532844 LINC00472Q9H8W2 130 aa4.91□□□□□ -1.62
CTNND1-234ENST00000532844 SPRR1BP22528 89 aa4.91□□□□□ -1.62
CTNND1-234ENST00000532844 KRTAP1-5Q9BYS1 174 aa4.9□□□□□ -1.62
CTNND1-234ENST00000532844 KRTAP25-1Q3LHN0 102 aa4.89□□□□□ -1.63
CTNND1-234ENST00000532844 C20orf166-AS1Q96NR2 134 aa4.89□□□□□ -1.63
CTNND1-234ENST00000532844 BRCA2P51587 3418 aa4.86□□□□□ -1.63
CTNND1-234ENST00000532844 EPG5Q9HCE0 2579 aa4.86□□□□□ -1.63
CTNND1-234ENST00000532844 FLNAP21333 2647 aaKnown RBP4.85□□□□□ -1.63
CTNND1-234ENST00000532844 HECTD1Q9ULT8 2610 aa4.85□□□□□ -1.63
CTNND1-234ENST00000532844 SPATA8Q6RVD6 105 aa4.85□□□□□ -1.63
CTNND1-234ENST00000532844 RANBP2P49792 3224 aaKnown RBP4.85□□□□□ -1.63
CTNND1-234ENST00000532844 A6NN06 94 aa4.83□□□□□ -1.64
CTNND1-234ENST00000532844 ITPR3Q14573 2671 aa4.81□□□□□ -1.64
CTNND1-234ENST00000532844 UNC80Q8N2C7 3258 aa4.8□□□□□ -1.64
CTNND1-234ENST00000532844 KRTAP4-16G5E9R7 235 aaPredicted RBP4.8□□□□□ -1.64
CTNND1-234ENST00000532844 ADM2Q7Z4H4 148 aa4.8□□□□□ -1.64
CTNND1-234ENST00000532844 LAMA3Q16787 3333 aa4.79□□□□□ -1.64
CTNND1-234ENST00000532844 KRTAP10-1P60331 282 aa4.79□□□□□ -1.64
CTNND1-234ENST00000532844 KRTAP10-2P60368 255 aa4.79□□□□□ -1.64
CTNND1-234ENST00000532844 NBEAQ8NFP9 2946 aa4.78□□□□□ -1.64
CTNND1-234ENST00000532844 PANO1I0J062 215 aa4.78□□□□□ -1.64
CTNND1-234ENST00000532844 TRIOO75962 3097 aa4.78□□□□□ -1.64
CTNND1-234ENST00000532844 USP24Q9UPU5 2620 aa4.77□□□□□ -1.65
CTNND1-234ENST00000532844 MGAM2Q2M2H8 2515 aa4.76□□□□□ -1.65
CTNND1-234ENST00000532844 Q6ZR54 194 aa4.76□□□□□ -1.65
CTNND1-234ENST00000532844 KRTAP29-1A8MX34 341 aaPredicted RBP4.75□□□□□ -1.65
CTNND1-234ENST00000532844 DNAH14Q0VDD8 3507 aa4.74□□□□□ -1.65
CTNND1-234ENST00000532844 DSPP15924 2871 aaKnown RBP4.74□□□□□ -1.65
CTNND1-234ENST00000532844 ATRQ13535 2644 aa4.73□□□□□ -1.65
CTNND1-234ENST00000532844 VPS13AQ96RL7 3174 aa4.72□□□□□ -1.65
CTNND1-234ENST00000532844 FRYQ5TBA9 3013 aa4.71□□□□□ -1.65
CTNND1-234ENST00000532844 MGAQ8IWI9 3026 aa4.71□□□□□ -1.66
CTNND1-234ENST00000532844 C10orf95Q9H7T3 257 aa4.71□□□□□ -1.66
CTNND1-234ENST00000532844 A8MU10 97 aa4.7□□□□□ -1.66
CTNND1-234ENST00000532844 CDH23Q9H251 3354 aa4.7□□□□□ -1.66
CTNND1-234ENST00000532844 A0A087X002 238 aa4.7□□□□□ -1.66
CTNND1-234ENST00000532844 DMBT1Q9UGM3 2413 aaPredicted RBP4.7□□□□□ -1.66
CTNND1-234ENST00000532844 KRTAP11-1Q8IUC1 163 aa4.69□□□□□ -1.66
CTNND1-234ENST00000532844 NOTCH2NLQ7Z3S9 236 aa4.69□□□□□ -1.66
CTNND1-234ENST00000532844 FLNBO75369 2602 aaKnown RBP4.69□□□□□ -1.66
CTNND1-234ENST00000532844 LAMA1P25391 3075 aa4.68□□□□□ -1.66
CTNND1-234ENST00000532844 HELZ2Q9BYK8 2649 aaKnown RBP4.68□□□□□ -1.66
CTNND1-234ENST00000532844 VCANP13611 3396 aa4.68□□□□□ -1.66
CTNND1-234ENST00000532844 CFAP46Q8IYW2 2715 aa4.67□□□□□ -1.66
CTNND1-234ENST00000532844 WDFY4Q6ZS81 3184 aa4.67□□□□□ -1.66
CTNND1-234ENST00000532844 KRTAP7-1Q8IUC3 87 aa4.66□□□□□ -1.66
CTNND1-234ENST00000532844 XIRP2A4UGR9 3374 aa4.66□□□□□ -1.66
CTNND1-234ENST00000532844 AKAP13Q12802 2813 aa4.66□□□□□ -1.66
CTNND1-234ENST00000532844 MAST4O15021 2626 aa4.65□□□□□ -1.67
CTNND1-234ENST00000532844 A8MUU9 505 aa4.65□□□□□ -1.67
CTNND1-234ENST00000532844 TNP1P09430 55 aa4.64□□□□□ -1.67
CTNND1-234ENST00000532844 PRUNE2Q8WUY3 3088 aa4.64□□□□□ -1.67
CTNND1-234ENST00000532844 CELSR3Q9NYQ7 3312 aa4.64□□□□□ -1.67
CTNND1-234ENST00000532844 Q6ZRN7 208 aaPredicted RBP4.63□□□□□ -1.67
CTNND1-234ENST00000532844 GCN1Q92616 2671 aaKnown RBP4.63□□□□□ -1.67
CTNND1-234ENST00000532844 FREM2Q5SZK8 3169 aa4.62□□□□□ -1.67
CTNND1-234ENST00000532844 KALRNO60229 2985 aa4.61□□□□□ -1.67
CTNND1-234ENST00000532844 CENPEQ02224 2701 aa4.61□□□□□ -1.67
CTNND1-234ENST00000532844 RPS29P62273 56 aaKnown RBP4.61□□□□□ -1.67
CTNND1-234ENST00000532844 CHD6Q8TD26 2715 aa4.61□□□□□ -1.67
CTNND1-234ENST00000532844 ZNF292O60281 2723 aa4.6□□□□□ -1.67
CTNND1-234ENST00000532844 PP632Q6XCG6 107 aa4.59□□□□□ -1.68
CTNND1-234ENST00000532844 FRYLO94915 3013 aa4.58□□□□□ -1.68
CTNND1-234ENST00000532844 KRTAP13-1Q8IUC0 172 aa4.58□□□□□ -1.68
CTNND1-234ENST00000532844 STAB2Q8WWQ8 2551 aa4.58□□□□□ -1.68
CTNND1-234ENST00000532844 UNC79Q9P2D8 2635 aa4.57□□□□□ -1.68
CTNND1-234ENST00000532844 SZT2Q5T011 3432 aa4.57□□□□□ -1.68
CTNND1-234ENST00000532844 KRTAP13-2Q52LG2 175 aa4.56□□□□□ -1.68
CTNND1-234ENST00000532844 MAP1AP78559 2803 aaPredicted RBP4.56□□□□□ -1.68
CTNND1-234ENST00000532844 NBEAL2Q6ZNJ1 2754 aa4.54□□□□□ -1.68
CTNND1-234ENST00000532844 ADGRG4Q8IZF6 3080 aa4.54□□□□□ -1.68
CTNND1-234ENST00000532844 STAB1Q9NY15 2570 aa4.54□□□□□ -1.68
CTNND1-234ENST00000532844 TEX15Q9BXT5 2789 aa4.53□□□□□ -1.68
CTNND1-234ENST00000532844 TACC2O95359 2948 aa4.52□□□□□ -1.69
CTNND1-234ENST00000532844 ZZEF1O43149 2961 aa4.52□□□□□ -1.69
CTNND1-234ENST00000532844 KRTAP21-3Q3LHN1 58 aa4.52□□□□□ -1.69
CTNND1-234ENST00000532844 USP34Q70CQ2 3546 aa4.5□□□□□ -1.69
CTNND1-234ENST00000532844 LRBAP50851 2863 aa4.5□□□□□ -1.69
CTNND1-234ENST00000532844 SPEGQ15772 3267 aa4.5□□□□□ -1.69
CTNND1-234ENST00000532844 NBEAL1Q6ZS30 2694 aa4.49□□□□□ -1.69
CTNND1-234ENST00000532844 ITPR1Q14643 2758 aa4.49□□□□□ -1.69
CTNND1-234ENST00000532844 P0C880 135 aa4.49□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms