RNA–Protein interactions for RNA: ENST00000528989.5

LDLRAD3-203, Transcript of low density lipoprotein receptor class A domain containing 3, humanhuman

TSL 1 (best) BASIC

Gene LDLRAD3, Length 1,879 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDLRAD3-203ENST00000528989 SMCPP49901 116 aaPredicted RBP14.73□□□□□ -0.05
LDLRAD3-203ENST00000528989 UBE2V1Q13404 147 aa14.73□□□□□ -0.05
LDLRAD3-203ENST00000528989 TMEM256-PLSCR3K7ERE1 68 aa14.72□□□□□ -0.05
LDLRAD3-203ENST00000528989 A0A087X002 238 aa14.7□□□□□ -0.06
LDLRAD3-203ENST00000528989 LRP1Q07954 4544 aaKnown RBP14.69□□□□□ -0.06
LDLRAD3-203ENST00000528989 A0A1B0GV72 72 aa14.69□□□□□ -0.06
LDLRAD3-203ENST00000528989 ANKRD29Q8N6D5 301 aa14.68□□□□□ -0.06
LDLRAD3-203ENST00000528989 FLG2Q5D862 2391 aaPredicted RBP14.68□□□□□ -0.06
LDLRAD3-203ENST00000528989 PPDPFLQ8WWR9 84 aa14.67□□□□□ -0.06
LDLRAD3-203ENST00000528989 NDUFV3P56181 108 aaKnown RBP14.66□□□□□ -0.06
LDLRAD3-203ENST00000528989 IGLV9-49A0A0B4J1Y8 123 aa14.65□□□□□ -0.06
LDLRAD3-203ENST00000528989 GHRHP01286 108 aa14.65□□□□□ -0.06
LDLRAD3-203ENST00000528989 LAMTOR3Q9UHA4 124 aa14.65□□□□□ -0.06
LDLRAD3-203ENST00000528989 H3BT86 120 aa14.65□□□□□ -0.06
LDLRAD3-203ENST00000528989 MYCBP2O75592 4640 aa14.65□□□□□ -0.06
LDLRAD3-203ENST00000528989 ABCA13Q86UQ4 5058 aa14.63□□□□□ -0.07
LDLRAD3-203ENST00000528989 F8W1H4 67 aa14.62□□□□□ -0.07
LDLRAD3-203ENST00000528989 H3BQ85 93 aa14.62□□□□□ -0.07
LDLRAD3-203ENST00000528989 KRTAP13-2Q52LG2 175 aa14.62□□□□□ -0.07
LDLRAD3-203ENST00000528989 PRR26Q8N8Z3 221 aa14.61□□□□□ -0.07
LDLRAD3-203ENST00000528989 CRYGAP11844 174 aa14.6□□□□□ -0.07
LDLRAD3-203ENST00000528989 FAM229BQ4G0N7 80 aa14.6□□□□□ -0.07
LDLRAD3-203ENST00000528989 A0A0G2JQZ4 141 aa14.59□□□□□ -0.07
LDLRAD3-203ENST00000528989 MOBPQ13875 183 aa14.58□□□□□ -0.08
LDLRAD3-203ENST00000528989 LINC01600Q96MT4 127 aa14.57□□□□□ -0.08
LDLRAD3-203ENST00000528989 C9orf153Q5TBE3 101 aa14.57□□□□□ -0.08
LDLRAD3-203ENST00000528989 F8WEM9 126 aa14.55□□□□□ -0.08
LDLRAD3-203ENST00000528989 FAT3Q8TDW7 4589 aa14.55□□□□□ -0.08
LDLRAD3-203ENST00000528989 ETDBQ3ZM63 59 aa14.53□□□□□ -0.08
LDLRAD3-203ENST00000528989 RBM3P98179 157 aaKnown RBP14.5□□□□□ -0.09
LDLRAD3-203ENST00000528989 OBSCN-AS1Q96MR7 158 aa14.5□□□□□ -0.09
LDLRAD3-203ENST00000528989 IGLV8-61A0A075B6I0 122 aa14.49□□□□□ -0.09
LDLRAD3-203ENST00000528989 TYMSOSQ8TAI1 123 aa14.49□□□□□ -0.09
LDLRAD3-203ENST00000528989 Q8NBF4 154 aa14.48□□□□□ -0.09
LDLRAD3-203ENST00000528989 C14orf132Q9NPU4 83 aa14.48□□□□□ -0.09
LDLRAD3-203ENST00000528989 IGFL1Q6UW32 110 aa14.48□□□□□ -0.09
LDLRAD3-203ENST00000528989 JMJD7-PLA2G4BH0Y9G9 81 aa14.47□□□□□ -0.09
LDLRAD3-203ENST00000528989 TNXBP22105 4242 aa14.46□□□□□ -0.09
LDLRAD3-203ENST00000528989 TEN1Q86WV5 123 aa14.46□□□□□ -0.1
LDLRAD3-203ENST00000528989 TRBV7-4A0A0J9YYF1 115 aa14.43□□□□□ -0.1
LDLRAD3-203ENST00000528989 SSBP3-AS1Q7Z2R9 100 aa14.43□□□□□ -0.1
LDLRAD3-203ENST00000528989 DSCR8Q96T75 97 aa14.43□□□□□ -0.1
LDLRAD3-203ENST00000528989 KRTAP10-8P60410 259 aa14.42□□□□□ -0.1
LDLRAD3-203ENST00000528989 Q6JHZ5 121 aa14.4□□□□□ -0.1
LDLRAD3-203ENST00000528989 HRCT1Q6UXD1 115 aa14.4□□□□□ -0.1
LDLRAD3-203ENST00000528989 PCLOQ9Y6V0 5065 aa14.39□□□□□ -0.11
LDLRAD3-203ENST00000528989 MT1HL1P0DM35 61 aa14.38□□□□□ -0.11
LDLRAD3-203ENST00000528989 A0A1W2PNM2 257 aa14.37□□□□□ -0.11
LDLRAD3-203ENST00000528989 Q6ZQT0 140 aa14.37□□□□□ -0.11
LDLRAD3-203ENST00000528989 VPS25Q9BRG1 176 aa14.35□□□□□ -0.11
LDLRAD3-203ENST00000528989 LOC110117498A0A087WWA1 95 aa14.35□□□□□ -0.11
LDLRAD3-203ENST00000528989 OXTP01178 125 aa14.35□□□□□ -0.11
LDLRAD3-203ENST00000528989 CCKP06307 115 aa14.35□□□□□ -0.11
LDLRAD3-203ENST00000528989 KRTAP29-1A8MX34 341 aaPredicted RBP14.31□□□□□ -0.12
LDLRAD3-203ENST00000528989 LINC00304Q8N9R0 145 aa14.31□□□□□ -0.12
LDLRAD3-203ENST00000528989 PDE6GP18545 87 aa14.27□□□□□ -0.12
LDLRAD3-203ENST00000528989 DMBT1Q9UGM3 2413 aaPredicted RBP14.25□□□□□ -0.13
LDLRAD3-203ENST00000528989 C4orf48Q5BLP8 95 aa14.25□□□□□ -0.13
LDLRAD3-203ENST00000528989 Q6Q795 121 aa14.24□□□□□ -0.13
LDLRAD3-203ENST00000528989 TRBV7-7A0A0K0K1E9 115 aa14.23□□□□□ -0.13
LDLRAD3-203ENST00000528989 A0A087WSZ3 146 aa14.22□□□□□ -0.13
LDLRAD3-203ENST00000528989 CD164Q04900 197 aa14.22□□□□□ -0.13
LDLRAD3-203ENST00000528989 SPINK1P00995 79 aa14.19□□□□□ -0.14
LDLRAD3-203ENST00000528989 SPAG11AQ6PDA7 123 aa14.18□□□□□ -0.14
LDLRAD3-203ENST00000528989 J3QL48 77 aa14.17□□□□□ -0.14
LDLRAD3-203ENST00000528989 LINC00846Q9NV44 126 aa14.1□□□□□ -0.15
LDLRAD3-203ENST00000528989 RPS29P62273 56 aaKnown RBP14.07□□□□□ -0.16
LDLRAD3-203ENST00000528989 C21orf62-AS1Q17RA5 79 aa14.07□□□□□ -0.16
LDLRAD3-203ENST00000528989 A0A1B0GW54 56 aa14.06□□□□□ -0.16
LDLRAD3-203ENST00000528989 Q5XG85 94 aa14.05□□□□□ -0.16
LDLRAD3-203ENST00000528989 RETNLBQ9BQ08 111 aa14.05□□□□□ -0.16
LDLRAD3-203ENST00000528989 LIMD2Q9BT23 127 aa14.05□□□□□ -0.16
LDLRAD3-203ENST00000528989 DEFB116Q30KQ4 102 aa14.02□□□□□ -0.16
LDLRAD3-203ENST00000528989 SS18L2Q9UHA2 77 aa14.01□□□□□ -0.17
LDLRAD3-203ENST00000528989 J3QR89 54 aa14□□□□□ -0.17
LDLRAD3-203ENST00000528989 Q96NJ1 140 aa14□□□□□ -0.17
LDLRAD3-203ENST00000528989 FAM240AA0A1B0GVK7 77 aa13.99□□□□□ -0.17
LDLRAD3-203ENST00000528989 NREPQ16612 68 aa13.99□□□□□ -0.17
LDLRAD3-203ENST00000528989 C1orf195Q5TG92 126 aa13.99□□□□□ -0.17
LDLRAD3-203ENST00000528989 Q6ZVQ6 151 aa13.98□□□□□ -0.17
LDLRAD3-203ENST00000528989 ACYP1P07311 99 aa13.97□□□□□ -0.17
LDLRAD3-203ENST00000528989 ASB16-AS1Q495Z4 193 aa13.97□□□□□ -0.17
LDLRAD3-203ENST00000528989 LINC00472Q9H8W2 130 aa13.97□□□□□ -0.17
LDLRAD3-203ENST00000528989 K7ERU9 68 aa13.94□□□□□ -0.18
LDLRAD3-203ENST00000528989 UBL5Q9BZL1 73 aa13.94□□□□□ -0.18
LDLRAD3-203ENST00000528989 HERC1Q15751 4861 aa13.94□□□□□ -0.18
LDLRAD3-203ENST00000528989 IGKV4-1P06312 121 aa13.88□□□□□ -0.19
LDLRAD3-203ENST00000528989 CDIP1Q9H305 208 aa13.85□□□□□ -0.19
LDLRAD3-203ENST00000528989 BPY2O14599 106 aa13.82□□□□□ -0.2
LDLRAD3-203ENST00000528989 SIGMAR1Q99720 223 aa13.82□□□□□ -0.2
LDLRAD3-203ENST00000528989 PRR4Q16378 134 aa13.8□□□□□ -0.2
LDLRAD3-203ENST00000528989 DSCR10P59022 87 aa13.79□□□□□ -0.2
LDLRAD3-203ENST00000528989 Q8N9L7 120 aa13.76□□□□□ -0.21
LDLRAD3-203ENST00000528989 IGKV3D-7A0A0C4DH55 119 aa13.76□□□□□ -0.21
LDLRAD3-203ENST00000528989 J3KT08 172 aa13.76□□□□□ -0.21
LDLRAD3-203ENST00000528989 IGLV7-46A0A075B6I9 117 aa13.74□□□□□ -0.21
LDLRAD3-203ENST00000528989 LINC00643Q86TS7 51 aa13.74□□□□□ -0.21
LDLRAD3-203ENST00000528989 FP248Q71RG6 208 aaPredicted RBP13.73□□□□□ -0.21
LDLRAD3-203ENST00000528989 A8MWP4 228 aa13.72□□□□□ -0.21
LDLRAD3-203ENST00000528989 K7EQZ3 153 aa13.72□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 65.7 ms