RNA–Protein interactions for RNA: ENST00000526669.6

CD44-224, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 5 BASIC

Gene CD44, Length 870 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-224ENST00000526669 SPRR1BP22528 89 aa8.09□□□□□ -1.11
CD44-224ENST00000526669 TYMSOSQ8TAI1 123 aa8.09□□□□□ -1.11
CD44-224ENST00000526669 KRTAP10-8P60410 259 aa8.08□□□□□ -1.12
CD44-224ENST00000526669 C9orf153Q5TBE3 101 aa8.08□□□□□ -1.12
CD44-224ENST00000526669 A0A1W2PPM0 123 aa8.07□□□□□ -1.12
CD44-224ENST00000526669 MOBPQ13875 183 aa8.07□□□□□ -1.12
CD44-224ENST00000526669 LYRM7Q5U5X0 104 aa8.07□□□□□ -1.12
CD44-224ENST00000526669 LAMTOR3Q9UHA4 124 aa8.07□□□□□ -1.12
CD44-224ENST00000526669 ATXN8Q156A1 80 aa8.06□□□□□ -1.12
CD44-224ENST00000526669 SMIM29Q86T20 159 aa8.06□□□□□ -1.12
CD44-224ENST00000526669 TRACP01848 142 aa8.05□□□□□ -1.12
CD44-224ENST00000526669 FABP2P12104 132 aa8.04□□□□□ -1.12
CD44-224ENST00000526669 ORMDL1Q9P0S3 153 aa8.04□□□□□ -1.12
CD44-224ENST00000526669 OCIAD2Q56VL3 154 aa8.03□□□□□ -1.12
CD44-224ENST00000526669 Q8NBF4 154 aa8.02□□□□□ -1.13
CD44-224ENST00000526669 A0A1B0GV72 72 aa8.01□□□□□ -1.13
CD44-224ENST00000526669 F8WEM9 126 aa8.01□□□□□ -1.13
CD44-224ENST00000526669 PPDPFLQ8WWR9 84 aa8.01□□□□□ -1.13
CD44-224ENST00000526669 SPCS1Q9Y6A9 102 aa8.01□□□□□ -1.13
CD44-224ENST00000526669 TRBV20-1A0A075B6N2 111 aa8□□□□□ -1.13
CD44-224ENST00000526669 A0A0G2JQZ4 141 aa8□□□□□ -1.13
CD44-224ENST00000526669 MTURNQ8N3F0 131 aa7.99□□□□□ -1.13
CD44-224ENST00000526669 LINC00304Q8N9R0 145 aa7.99□□□□□ -1.13
CD44-224ENST00000526669 C9JAW5 83 aa7.98□□□□□ -1.13
CD44-224ENST00000526669 BAALC-AS2P0C853 105 aa7.98□□□□□ -1.13
CD44-224ENST00000526669 NDUFV3P56181 108 aaKnown RBP7.98□□□□□ -1.13
CD44-224ENST00000526669 SSBP3-AS1Q7Z2R9 100 aa7.98□□□□□ -1.13
CD44-224ENST00000526669 H3BMG7 143 aa7.97□□□□□ -1.13
CD44-224ENST00000526669 GHRHP01286 108 aa7.97□□□□□ -1.13
CD44-224ENST00000526669 HRCT1Q6UXD1 115 aa7.97□□□□□ -1.13
CD44-224ENST00000526669 TMEM256-PLSCR3K7ERE1 68 aa7.96□□□□□ -1.14
CD44-224ENST00000526669 H3BQ85 93 aa7.94□□□□□ -1.14
CD44-224ENST00000526669 K7EP34 96 aa7.94□□□□□ -1.14
CD44-224ENST00000526669 UBE2V1Q13404 147 aa7.93□□□□□ -1.14
CD44-224ENST00000526669 C4orf48Q5BLP8 95 aa7.93□□□□□ -1.14
CD44-224ENST00000526669 IGFL1Q6UW32 110 aa7.93□□□□□ -1.14
CD44-224ENST00000526669 IGLV8-61A0A075B6I0 122 aa7.92□□□□□ -1.14
CD44-224ENST00000526669 ANKRD29Q8N6D5 301 aa7.92□□□□□ -1.14
CD44-224ENST00000526669 Q6JHZ5 121 aa7.91□□□□□ -1.14
CD44-224ENST00000526669 HERC1Q15751 4861 aa7.9□□□□□ -1.14
CD44-224ENST00000526669 SPAG11AQ6PDA7 123 aa7.89□□□□□ -1.15
CD44-224ENST00000526669 H3BT86 120 aa7.88□□□□□ -1.15
CD44-224ENST00000526669 GTF2H5Q6ZYL4 71 aa7.88□□□□□ -1.15
CD44-224ENST00000526669 A0A1B0GV90 55 aa7.87□□□□□ -1.15
CD44-224ENST00000526669 SMCPP49901 116 aaPredicted RBP7.87□□□□□ -1.15
CD44-224ENST00000526669 SPINK1P00995 79 aa7.86□□□□□ -1.15
CD44-224ENST00000526669 RBM3P98179 157 aaKnown RBP7.86□□□□□ -1.15
CD44-224ENST00000526669 RETNLBQ9BQ08 111 aa7.86□□□□□ -1.15
CD44-224ENST00000526669 PRO0461Q9UI25 63 aa7.85□□□□□ -1.15
CD44-224ENST00000526669 CD164Q04900 197 aa7.84□□□□□ -1.15
CD44-224ENST00000526669 A0A1W2PNM2 257 aa7.83□□□□□ -1.16
CD44-224ENST00000526669 VPS25Q9BRG1 176 aa7.83□□□□□ -1.16
CD44-224ENST00000526669 TRBV7-4A0A0J9YYF1 115 aa7.82□□□□□ -1.16
CD44-224ENST00000526669 TRBV7-7A0A0K0K1E9 115 aa7.82□□□□□ -1.16
CD44-224ENST00000526669 JMJD7-PLA2G4BH0Y9G9 81 aa7.82□□□□□ -1.16
CD44-224ENST00000526669 DSCR8Q96T75 97 aa7.82□□□□□ -1.16
CD44-224ENST00000526669 C14orf132Q9NPU4 83 aa7.82□□□□□ -1.16
CD44-224ENST00000526669 LIMD2Q9BT23 127 aa7.81□□□□□ -1.16
CD44-224ENST00000526669 CCKP06307 115 aa7.8□□□□□ -1.16
CD44-224ENST00000526669 RPS29P62273 56 aaKnown RBP7.8□□□□□ -1.16
CD44-224ENST00000526669 TEN1Q86WV5 123 aa7.8□□□□□ -1.16
CD44-224ENST00000526669 OBSCN-AS1Q96MR7 158 aa7.79□□□□□ -1.16
CD44-224ENST00000526669 A0A087WSZ3 146 aa7.78□□□□□ -1.16
CD44-224ENST00000526669 PRR4Q16378 134 aa7.78□□□□□ -1.16
CD44-224ENST00000526669 Q6Q795 121 aa7.78□□□□□ -1.16
CD44-224ENST00000526669 Q6ZQT0 140 aa7.78□□□□□ -1.16
CD44-224ENST00000526669 LOC110117498A0A087WWA1 95 aa7.76□□□□□ -1.17
CD44-224ENST00000526669 F8W1H4 67 aa7.76□□□□□ -1.17
CD44-224ENST00000526669 ETDBQ3ZM63 59 aa7.73□□□□□ -1.17
CD44-224ENST00000526669 Q5XG85 94 aa7.73□□□□□ -1.17
CD44-224ENST00000526669 LPAP08519 4548 aa7.73□□□□□ -1.17
CD44-224ENST00000526669 HMCN2Q8NDA2 5059 aa7.73□□□□□ -1.17
CD44-224ENST00000526669 PDE6GP18545 87 aa7.72□□□□□ -1.17
CD44-224ENST00000526669 C1orf195Q5TG92 126 aa7.72□□□□□ -1.17
CD44-224ENST00000526669 SS18L2Q9UHA2 77 aa7.72□□□□□ -1.17
CD44-224ENST00000526669 IGLV7-46A0A075B6I9 117 aa7.7□□□□□ -1.18
CD44-224ENST00000526669 ASB16-AS1Q495Z4 193 aa7.69□□□□□ -1.18
CD44-224ENST00000526669 FP248Q71RG6 208 aaPredicted RBP7.68□□□□□ -1.18
CD44-224ENST00000526669 Q96NJ1 140 aa7.67□□□□□ -1.18
CD44-224ENST00000526669 DEFB116Q30KQ4 102 aa7.66□□□□□ -1.18
CD44-224ENST00000526669 C21orf62-AS1Q17RA5 79 aa7.64□□□□□ -1.19
CD44-224ENST00000526669 SIGMAR1Q99720 223 aa7.63□□□□□ -1.19
CD44-224ENST00000526669 LRP2P98164 4655 aa7.62□□□□□ -1.19
CD44-224ENST00000526669 C9orf92A6NGG3 77 aa7.61□□□□□ -1.19
CD44-224ENST00000526669 IGKV4-1P06312 121 aa7.61□□□□□ -1.19
CD44-224ENST00000526669 LINC00472Q9H8W2 130 aa7.61□□□□□ -1.19
CD44-224ENST00000526669 A0A1B0GW54 56 aa7.6□□□□□ -1.19
CD44-224ENST00000526669 NREPQ16612 68 aa7.59□□□□□ -1.19
CD44-224ENST00000526669 KRTAP13-3Q3SY46 172 aa7.59□□□□□ -1.19
CD44-224ENST00000526669 TPRXLQ17RH7 258 aa7.58□□□□□ -1.2
CD44-224ENST00000526669 LINC00846Q9NV44 126 aa7.57□□□□□ -1.2
CD44-224ENST00000526669 CDIP1Q9H305 208 aa7.56□□□□□ -1.2
CD44-224ENST00000526669 Q6ZVQ6 151 aa7.55□□□□□ -1.2
CD44-224ENST00000526669 MUC17Q685J3 4493 aa7.53□□□□□ -1.2
CD44-224ENST00000526669 J3KT08 172 aa7.52□□□□□ -1.21
CD44-224ENST00000526669 DSCR10P59022 87 aa7.52□□□□□ -1.21
CD44-224ENST00000526669 UBL5Q9BZL1 73 aa7.52□□□□□ -1.21
CD44-224ENST00000526669 IGHV6-1A0A0B4J1U7 121 aa7.51□□□□□ -1.21
CD44-224ENST00000526669 XP32Q5T750 250 aa7.5□□□□□ -1.21
CD44-224ENST00000526669 A0A1B0GVX0 72 aa7.49□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 57 ms