RNA–Protein interactions for RNA: ENST00000522012.5

R3HCC1-208, Transcript of R3H domain and coiled-coil containing 1, humanhuman

TSL 1 (best)

Gene R3HCC1, Length 1,500 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
R3HCC1-208ENST00000522012 LAMTOR3Q9UHA4 124 aa12.87□□□□□ -0.35
R3HCC1-208ENST00000522012 C3orf22Q8N5N4 141 aa12.86□□□□□ -0.35
R3HCC1-208ENST00000522012 HSPG2P98160 4391 aa12.85□□□□□ -0.35
R3HCC1-208ENST00000522012 SPRR1BP22528 89 aa12.85□□□□□ -0.35
R3HCC1-208ENST00000522012 LINC01600Q96MT4 127 aa12.85□□□□□ -0.35
R3HCC1-208ENST00000522012 NDUFV3P56181 108 aaKnown RBP12.84□□□□□ -0.35
R3HCC1-208ENST00000522012 ANAPC11Q9NYG5 84 aa12.84□□□□□ -0.35
R3HCC1-208ENST00000522012 A0A1B0GV72 72 aa12.83□□□□□ -0.35
R3HCC1-208ENST00000522012 Q8N1X5 172 aa12.83□□□□□ -0.35
R3HCC1-208ENST00000522012 LINC00483Q53H64 154 aa12.83□□□□□ -0.36
R3HCC1-208ENST00000522012 SMIM29Q86T20 159 aa12.82□□□□□ -0.36
R3HCC1-208ENST00000522012 FAT1Q14517 4588 aa12.8□□□□□ -0.36
R3HCC1-208ENST00000522012 VPS13BQ7Z7G8 4022 aa12.8□□□□□ -0.36
R3HCC1-208ENST00000522012 ETDBQ3ZM63 59 aa12.8□□□□□ -0.36
R3HCC1-208ENST00000522012 F8WEM9 126 aa12.78□□□□□ -0.36
R3HCC1-208ENST00000522012 TEN1Q86WV5 123 aa12.78□□□□□ -0.36
R3HCC1-208ENST00000522012 SRRM2Q9UQ35 2752 aaKnown RBP12.77□□□□□ -0.37
R3HCC1-208ENST00000522012 JMJD7-PLA2G4BH0Y9G9 81 aa12.75□□□□□ -0.37
R3HCC1-208ENST00000522012 IGLV9-49A0A0B4J1Y8 123 aa12.74□□□□□ -0.37
R3HCC1-208ENST00000522012 KRTAP1-4P0C5Y4 121 aa12.74□□□□□ -0.37
R3HCC1-208ENST00000522012 RBM3P98179 157 aaKnown RBP12.74□□□□□ -0.37
R3HCC1-208ENST00000522012 OBSCN-AS1Q96MR7 158 aa12.72□□□□□ -0.37
R3HCC1-208ENST00000522012 C9orf153Q5TBE3 101 aa12.71□□□□□ -0.38
R3HCC1-208ENST00000522012 C14orf132Q9NPU4 83 aa12.71□□□□□ -0.38
R3HCC1-208ENST00000522012 FAM229BQ4G0N7 80 aa12.7□□□□□ -0.38
R3HCC1-208ENST00000522012 DSCR8Q96T75 97 aa12.69□□□□□ -0.38
R3HCC1-208ENST00000522012 A0A087X002 238 aa12.67□□□□□ -0.38
R3HCC1-208ENST00000522012 CRYGAP11844 174 aa12.67□□□□□ -0.38
R3HCC1-208ENST00000522012 MOBPQ13875 183 aa12.67□□□□□ -0.38
R3HCC1-208ENST00000522012 IGLV8-61A0A075B6I0 122 aa12.66□□□□□ -0.38
R3HCC1-208ENST00000522012 A0A0G2JQZ4 141 aa12.63□□□□□ -0.39
R3HCC1-208ENST00000522012 TRBV7-4A0A0J9YYF1 115 aa12.63□□□□□ -0.39
R3HCC1-208ENST00000522012 KRTAP13-2Q52LG2 175 aa12.63□□□□□ -0.39
R3HCC1-208ENST00000522012 Q8NBF4 154 aa12.63□□□□□ -0.39
R3HCC1-208ENST00000522012 Q6JHZ5 121 aa12.62□□□□□ -0.39
R3HCC1-208ENST00000522012 IGFL1Q6UW32 110 aa12.62□□□□□ -0.39
R3HCC1-208ENST00000522012 PRR26Q8N8Z3 221 aa12.62□□□□□ -0.39
R3HCC1-208ENST00000522012 LOC110117498A0A087WWA1 95 aa12.61□□□□□ -0.39
R3HCC1-208ENST00000522012 Q6ZQT0 140 aa12.6□□□□□ -0.39
R3HCC1-208ENST00000522012 PDE6GP18545 87 aa12.59□□□□□ -0.39
R3HCC1-208ENST00000522012 VPS25Q9BRG1 176 aa12.59□□□□□ -0.39
R3HCC1-208ENST00000522012 SSBP3-AS1Q7Z2R9 100 aa12.57□□□□□ -0.4
R3HCC1-208ENST00000522012 TYMSOSQ8TAI1 123 aa12.57□□□□□ -0.4
R3HCC1-208ENST00000522012 CCKP06307 115 aa12.57□□□□□ -0.4
R3HCC1-208ENST00000522012 A0A1W2PNM2 257 aa12.53□□□□□ -0.4
R3HCC1-208ENST00000522012 HRCT1Q6UXD1 115 aa12.52□□□□□ -0.41
R3HCC1-208ENST00000522012 PKHD1L1Q86WI1 4243 aa12.49□□□□□ -0.41
R3HCC1-208ENST00000522012 J3QR89 54 aa12.49□□□□□ -0.41
R3HCC1-208ENST00000522012 C21orf62-AS1Q17RA5 79 aa12.49□□□□□ -0.41
R3HCC1-208ENST00000522012 HERC1Q15751 4861 aa12.48□□□□□ -0.41
R3HCC1-208ENST00000522012 Q6Q795 121 aa12.45□□□□□ -0.42
R3HCC1-208ENST00000522012 C4orf48Q5BLP8 95 aa12.43□□□□□ -0.42
R3HCC1-208ENST00000522012 TRBV7-7A0A0K0K1E9 115 aa12.42□□□□□ -0.42
R3HCC1-208ENST00000522012 K7ERU9 68 aa12.42□□□□□ -0.42
R3HCC1-208ENST00000522012 CD164Q04900 197 aa12.42□□□□□ -0.42
R3HCC1-208ENST00000522012 KRTAP10-8P60410 259 aa12.42□□□□□ -0.42
R3HCC1-208ENST00000522012 LINC00304Q8N9R0 145 aa12.42□□□□□ -0.42
R3HCC1-208ENST00000522012 A0A087WSZ3 146 aa12.41□□□□□ -0.42
R3HCC1-208ENST00000522012 ACYP1P07311 99 aa12.4□□□□□ -0.42
R3HCC1-208ENST00000522012 A0A1B0GW54 56 aa12.39□□□□□ -0.43
R3HCC1-208ENST00000522012 FAM240AA0A1B0GVK7 77 aa12.38□□□□□ -0.43
R3HCC1-208ENST00000522012 OXTP01178 125 aa12.38□□□□□ -0.43
R3HCC1-208ENST00000522012 DMBT1Q9UGM3 2413 aaPredicted RBP12.37□□□□□ -0.43
R3HCC1-208ENST00000522012 LINC00846Q9NV44 126 aa12.37□□□□□ -0.43
R3HCC1-208ENST00000522012 SPAG11AQ6PDA7 123 aa12.36□□□□□ -0.43
R3HCC1-208ENST00000522012 SPINK1P00995 79 aa12.34□□□□□ -0.43
R3HCC1-208ENST00000522012 FLG2Q5D862 2391 aaPredicted RBP12.33□□□□□ -0.44
R3HCC1-208ENST00000522012 MT1HL1P0DM35 61 aa12.32□□□□□ -0.44
R3HCC1-208ENST00000522012 NREPQ16612 68 aa12.31□□□□□ -0.44
R3HCC1-208ENST00000522012 UBL5Q9BZL1 73 aa12.31□□□□□ -0.44
R3HCC1-208ENST00000522012 LRP1Q07954 4544 aaKnown RBP12.3□□□□□ -0.44
R3HCC1-208ENST00000522012 KRTAP29-1A8MX34 341 aaPredicted RBP12.3□□□□□ -0.44
R3HCC1-208ENST00000522012 SS18L2Q9UHA2 77 aa12.3□□□□□ -0.44
R3HCC1-208ENST00000522012 MYCBP2O75592 4640 aa12.29□□□□□ -0.44
R3HCC1-208ENST00000522012 Q6ZVQ6 151 aa12.28□□□□□ -0.44
R3HCC1-208ENST00000522012 LIMD2Q9BT23 127 aa12.28□□□□□ -0.44
R3HCC1-208ENST00000522012 FAT3Q8TDW7 4589 aa12.26□□□□□ -0.45
R3HCC1-208ENST00000522012 RPS29P62273 56 aaKnown RBP12.25□□□□□ -0.45
R3HCC1-208ENST00000522012 Q5XG85 94 aa12.24□□□□□ -0.45
R3HCC1-208ENST00000522012 J3QL48 77 aa12.23□□□□□ -0.45
R3HCC1-208ENST00000522012 CDIP1Q9H305 208 aa12.22□□□□□ -0.45
R3HCC1-208ENST00000522012 DEFB116Q30KQ4 102 aa12.21□□□□□ -0.46
R3HCC1-208ENST00000522012 ASB16-AS1Q495Z4 193 aa12.2□□□□□ -0.46
R3HCC1-208ENST00000522012 LINC00472Q9H8W2 130 aa12.19□□□□□ -0.46
R3HCC1-208ENST00000522012 LINC00643Q86TS7 51 aa12.16□□□□□ -0.46
R3HCC1-208ENST00000522012 Q96NJ1 140 aa12.16□□□□□ -0.46
R3HCC1-208ENST00000522012 TNXBP22105 4242 aa12.16□□□□□ -0.46
R3HCC1-208ENST00000522012 BPY2O14599 106 aa12.16□□□□□ -0.46
R3HCC1-208ENST00000522012 C1orf195Q5TG92 126 aa12.16□□□□□ -0.46
R3HCC1-208ENST00000522012 SIGMAR1Q99720 223 aa12.14□□□□□ -0.47
R3HCC1-208ENST00000522012 IGKV4-1P06312 121 aa12.13□□□□□ -0.47
R3HCC1-208ENST00000522012 IGKV3D-7A0A0C4DH55 119 aa12.11□□□□□ -0.47
R3HCC1-208ENST00000522012 J3KT08 172 aa12.11□□□□□ -0.47
R3HCC1-208ENST00000522012 RETNLBQ9BQ08 111 aa12.1□□□□□ -0.47
R3HCC1-208ENST00000522012 CXCL6P80162 114 aa12.07□□□□□ -0.48
R3HCC1-208ENST00000522012 ATP5EP2Q5VTU8 51 aa12.07□□□□□ -0.48
R3HCC1-208ENST00000522012 DSCR10P59022 87 aa12.06□□□□□ -0.48
R3HCC1-208ENST00000522012 MT-ATP8P03928 68 aa12.03□□□□□ -0.48
R3HCC1-208ENST00000522012 A8MWP4 228 aa12.02□□□□□ -0.48
R3HCC1-208ENST00000522012 Q8N9L7 120 aa12.02□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 8 ms