RNA–Protein interactions for RNA: ENST00000518877.1

PCM1-208, Transcript of pericentriolar material 1, humanhuman

TSL 3

Gene PCM1, Length 316 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCM1-208ENST00000518877 IER3IP1Q9Y5U9 82 aa-2.15□□□□□ -2.75
PCM1-208ENST00000518877 MLH3Q9UHC1 1453 aa-2.15□□□□□ -2.75
PCM1-208ENST00000518877 CEP170BQ9Y4F5 1589 aaPredicted RBP-2.15□□□□□ -2.75
PCM1-208ENST00000518877 LRRC7Q96NW7 1537 aa-2.16□□□□□ -2.75
PCM1-208ENST00000518877 NESP48681 1621 aa-2.16□□□□□ -2.75
PCM1-208ENST00000518877 LYNX1G3V0Z9 82 aa-2.16□□□□□ -2.76
PCM1-208ENST00000518877 IFI6P09912 130 aa-2.16□□□□□ -2.76
PCM1-208ENST00000518877 GAFA1Q96PS6 74 aa-2.16□□□□□ -2.76
PCM1-208ENST00000518877 RAPGEF2Q9Y4G8 1499 aa-2.16□□□□□ -2.76
PCM1-208ENST00000518877 CDC42BPGQ6DT37 1551 aa-2.16□□□□□ -2.76
PCM1-208ENST00000518877 ANKRD36CQ5JPF3 1778 aa-2.16□□□□□ -2.76
PCM1-208ENST00000518877 DMXL2Q8TDJ6 3036 aa-2.16□□□□□ -2.76
PCM1-208ENST00000518877 MGAQ8IWI9 3026 aa-2.17□□□□□ -2.76
PCM1-208ENST00000518877 F8WEM9 126 aa-2.17□□□□□ -2.76
PCM1-208ENST00000518877 IAPPP10997 89 aa-2.17□□□□□ -2.76
PCM1-208ENST00000518877 FAM107BQ9H098 131 aa-2.17□□□□□ -2.76
PCM1-208ENST00000518877 TSC22D3Q99576 134 aa-2.18□□□□□ -2.76
PCM1-208ENST00000518877 SPHKAPQ2M3C7 1700 aa-2.18□□□□□ -2.76
PCM1-208ENST00000518877 ZNF831Q5JPB2 1677 aa-2.18□□□□□ -2.76
PCM1-208ENST00000518877 RGPD1P0DJD0 1748 aa-2.19□□□□□ -2.76
PCM1-208ENST00000518877 ABCA3Q99758 1704 aa-2.19□□□□□ -2.76
PCM1-208ENST00000518877 ANKRD36BQ8N2N9 1353 aa-2.19□□□□□ -2.76
PCM1-208ENST00000518877 KRTAP20-1Q3LI63 56 aa-2.19□□□□□ -2.76
PCM1-208ENST00000518877 ETDBQ3ZM63 59 aa-2.19□□□□□ -2.76
PCM1-208ENST00000518877 TIMM8BQ9Y5J9 83 aaPredicted RBP-2.19□□□□□ -2.76
PCM1-208ENST00000518877 MYH4Q9Y623 1939 aa-2.19□□□□□ -2.76
PCM1-208ENST00000518877 NRKQ7Z2Y5 1582 aa-2.19□□□□□ -2.76
PCM1-208ENST00000518877 ITPR2Q14571 2701 aa-2.2□□□□□ -2.76
PCM1-208ENST00000518877 NWD1Q149M9 1564 aa-2.2□□□□□ -2.76
PCM1-208ENST00000518877 SUPT6HQ7KZ85 1726 aaKnown RBP-2.2□□□□□ -2.76
PCM1-208ENST00000518877 ATP7BP35670 1465 aa-2.2□□□□□ -2.76
PCM1-208ENST00000518877 NRXN1Q9ULB1 1477 aa-2.2□□□□□ -2.76
PCM1-208ENST00000518877 IQCF6A8MYZ5 107 aa-2.21□□□□□ -2.76
PCM1-208ENST00000518877 ZNF720Q7Z2F6 126 aa-2.21□□□□□ -2.76
PCM1-208ENST00000518877 NALCNQ8IZF0 1738 aa-2.21□□□□□ -2.76
PCM1-208ENST00000518877 TOGARAM1Q9Y4F4 1720 aa-2.22□□□□□ -2.76
PCM1-208ENST00000518877 A0A1B0GUT8 65 aa-2.22□□□□□ -2.76
PCM1-208ENST00000518877 PPP3R1P63098 170 aa-2.22□□□□□ -2.76
PCM1-208ENST00000518877 ATMQ13315 3056 aa-2.23□□□□□ -2.77
PCM1-208ENST00000518877 IGLV5-48A0A075B6I7 105 aa-2.23□□□□□ -2.77
PCM1-208ENST00000518877 TLN1Q9Y490 2541 aaKnown RBP-2.23□□□□□ -2.77
PCM1-208ENST00000518877 POLR1AO95602 1720 aaPredicted RBP-2.23□□□□□ -2.77
PCM1-208ENST00000518877 UNC13AQ9UPW8 1703 aa-2.23□□□□□ -2.77
PCM1-208ENST00000518877 GNGT2O14610 69 aa-2.24□□□□□ -2.77
PCM1-208ENST00000518877 GNG4P50150 75 aa-2.24□□□□□ -2.77
PCM1-208ENST00000518877 CSMD2Q7Z408 3487 aa-2.24□□□□□ -2.77
PCM1-208ENST00000518877 BAZ1AQ9NRL2 1556 aaPredicted RBP-2.24□□□□□ -2.77
PCM1-208ENST00000518877 PRDM15P57071 1507 aaPredicted RBP-2.25□□□□□ -2.77
PCM1-208ENST00000518877 LCE6AA0A183 80 aa-2.25□□□□□ -2.77
PCM1-208ENST00000518877 CORTO00230 105 aa-2.25□□□□□ -2.77
PCM1-208ENST00000518877 WFDC9Q8NEX5 89 aa-2.25□□□□□ -2.77
PCM1-208ENST00000518877 PARP4Q9UKK3 1724 aaKnown RBP-2.25□□□□□ -2.77
PCM1-208ENST00000518877 LTN1O94822 1766 aa-2.26□□□□□ -2.77
PCM1-208ENST00000518877 PZPP20742 1482 aa-2.26□□□□□ -2.77
PCM1-208ENST00000518877 TEX14Q8IWB6 1497 aa-2.26□□□□□ -2.77
PCM1-208ENST00000518877 DOT1LQ8TEK3 1739 aa-2.26□□□□□ -2.77
PCM1-208ENST00000518877 TRAV21A0A0B4J279 112 aa-2.27□□□□□ -2.77
PCM1-208ENST00000518877 A0A1B0GV90 55 aa-2.27□□□□□ -2.77
PCM1-208ENST00000518877 ATOX1O00244 68 aa-2.28□□□□□ -2.77
PCM1-208ENST00000518877 S100A1P23297 94 aa-2.28□□□□□ -2.77
PCM1-208ENST00000518877 PLGLAQ15195 96 aa-2.28□□□□□ -2.77
PCM1-208ENST00000518877 PMCHL2Q9BQD1 86 aa-2.28□□□□□ -2.77
PCM1-208ENST00000518877 FYCO1Q9BQS8 1478 aa-2.28□□□□□ -2.77
PCM1-208ENST00000518877 DLEU1O43261 78 aa-2.29□□□□□ -2.78
PCM1-208ENST00000518877 CYB5AP00167 134 aa-2.29□□□□□ -2.78
PCM1-208ENST00000518877 S100A12P80511 92 aa-2.29□□□□□ -2.78
PCM1-208ENST00000518877 WT1-ASQ06250 92 aa-2.29□□□□□ -2.78
PCM1-208ENST00000518877 PLIN4Q96Q06 1357 aa-2.29□□□□□ -2.78
PCM1-208ENST00000518877 CLTCQ00610 1675 aaKnown RBP-2.3□□□□□ -2.78
PCM1-208ENST00000518877 UQCRHLA0A096LP55 91 aa-2.3□□□□□ -2.78
PCM1-208ENST00000518877 RPL13AP3Q6NVV1 102 aa-2.3□□□□□ -2.78
PCM1-208ENST00000518877 LY75O60449 1722 aa-2.31□□□□□ -2.78
PCM1-208ENST00000518877 DDX60LQ5H9U9 1706 aaKnown RBP-2.31□□□□□ -2.78
PCM1-208ENST00000518877 HMGN1P05114 100 aa-2.31□□□□□ -2.78
PCM1-208ENST00000518877 ACYP1P07311 99 aa-2.31□□□□□ -2.78
PCM1-208ENST00000518877 GTF2H5Q6ZYL4 71 aa-2.33□□□□□ -2.78
PCM1-208ENST00000518877 EIF4G3O43432 1585 aaKnown RBP-2.33□□□□□ -2.78
PCM1-208ENST00000518877 ITSN2Q9NZM3 1697 aa-2.34□□□□□ -2.78
PCM1-208ENST00000518877 DEFB4AO15263 64 aa-2.34□□□□□ -2.78
PCM1-208ENST00000518877 COL5A1-AS1Q5SY13 56 aa-2.34□□□□□ -2.78
PCM1-208ENST00000518877 FREM2Q5SZK8 3169 aa-2.35□□□□□ -2.78
PCM1-208ENST00000518877 EPRSP07814 1512 aaKnown RBP-2.35□□□□□ -2.79
PCM1-208ENST00000518877 LINC01546A6NGU7 62 aa-2.35□□□□□ -2.79
PCM1-208ENST00000518877 HMGN2P05204 90 aaKnown RBP-2.35□□□□□ -2.79
PCM1-208ENST00000518877 TMEM203Q969S6 136 aa-2.35□□□□□ -2.79
PCM1-208ENST00000518877 NOP10Q9NPE3 64 aaKnown RBP-2.35□□□□□ -2.79
PCM1-208ENST00000518877 MAST1Q9Y2H9 1570 aa-2.36□□□□□ -2.79
PCM1-208ENST00000518877 ITSN1Q15811 1721 aa-2.36□□□□□ -2.79
PCM1-208ENST00000518877 BOD1L1Q8NFC6 3051 aa-2.36□□□□□ -2.79
PCM1-208ENST00000518877 NDUFB1O75438 58 aa-2.36□□□□□ -2.79
PCM1-208ENST00000518877 FAUP35544 74 aaKnown RBP-2.36□□□□□ -2.79
PCM1-208ENST00000518877 KIF1AQ12756 1690 aa-2.37□□□□□ -2.79
PCM1-208ENST00000518877 MT-ATP8P03928 68 aa-2.37□□□□□ -2.79
PCM1-208ENST00000518877 DIP2BQ9P265 1576 aa-2.37□□□□□ -2.79
PCM1-208ENST00000518877 KIAA0586Q9BVV6 1533 aa-2.37□□□□□ -2.79
PCM1-208ENST00000518877 FANCAO15360 1455 aa-2.38□□□□□ -2.79
PCM1-208ENST00000518877 S100PP25815 95 aa-2.38□□□□□ -2.79
PCM1-208ENST00000518877 THOC2Q8NI27 1593 aaKnown RBP-2.38□□□□□ -2.79
PCM1-208ENST00000518877 GNG8Q9UK08 70 aa-2.38□□□□□ -2.79
PCM1-208ENST00000518877 CCNB3Q8WWL7 1395 aa-2.38□□□□□ -2.79
Retrieved 100 of 20,778 RNA–protein pairs in 161.9 ms