RNA–Protein interactions for RNA: ENST00000513042.6

ARHGEF28-212, Transcript of Rho guanine nucleotide exchange factor 28, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene ARHGEF28, Length 6,273 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF28-212ENST00000513042 A0A0A0MQY5 61 aa10.29□□□□□ -0.76
ARHGEF28-212ENST00000513042 SPATA8Q6RVD6 105 aa10.29□□□□□ -0.76
ARHGEF28-212ENST00000513042 SEC61BP60468 96 aaKnown RBP10.29□□□□□ -0.76
ARHGEF28-212ENST00000513042 RPL37P61927 97 aaKnown RBP10.29□□□□□ -0.76
ARHGEF28-212ENST00000513042 UTRNP46939 3433 aa10.26□□□□□ -0.77
ARHGEF28-212ENST00000513042 ADM2Q7Z4H4 148 aa10.25□□□□□ -0.77
ARHGEF28-212ENST00000513042 BPTFQ12830 3046 aa10.25□□□□□ -0.77
ARHGEF28-212ENST00000513042 PANO1I0J062 215 aa10.23□□□□□ -0.77
ARHGEF28-212ENST00000513042 C5orf42Q9H799 3197 aa10.23□□□□□ -0.77
ARHGEF28-212ENST00000513042 Q6ZR54 194 aa10.23□□□□□ -0.77
ARHGEF28-212ENST00000513042 HECTD1Q9ULT8 2610 aa10.14□□□□□ -0.79
ARHGEF28-212ENST00000513042 LCE6AA0A183 80 aa10.14□□□□□ -0.79
ARHGEF28-212ENST00000513042 USP24Q9UPU5 2620 aa10.14□□□□□ -0.79
ARHGEF28-212ENST00000513042 PLAC4Q8WY50 150 aa10.12□□□□□ -0.79
ARHGEF28-212ENST00000513042 A0A087X002 238 aa10.12□□□□□ -0.79
ARHGEF28-212ENST00000513042 NOTCH2NLQ7Z3S9 236 aa10.1□□□□□ -0.79
ARHGEF28-212ENST00000513042 PRRC2CQ9Y520 2896 aaKnown RBP10.09□□□□□ -0.79
ARHGEF28-212ENST00000513042 KRTAP4-16G5E9R7 235 aaPredicted RBP10.09□□□□□ -0.79
ARHGEF28-212ENST00000513042 MGAM2Q2M2H8 2515 aa10.08□□□□□ -0.8
ARHGEF28-212ENST00000513042 KRTAP29-1A8MX34 341 aaPredicted RBP10.06□□□□□ -0.8
ARHGEF28-212ENST00000513042 FLNAP21333 2647 aaKnown RBP10.03□□□□□ -0.8
ARHGEF28-212ENST00000513042 KRTAP11-1Q8IUC1 163 aa9.99□□□□□ -0.81
ARHGEF28-212ENST00000513042 A8MU10 97 aa9.98□□□□□ -0.81
ARHGEF28-212ENST00000513042 EPG5Q9HCE0 2579 aa9.97□□□□□ -0.81
ARHGEF28-212ENST00000513042 CEP350Q5VT06 3117 aa9.97□□□□□ -0.81
ARHGEF28-212ENST00000513042 ITPR3Q14573 2671 aa9.96□□□□□ -0.81
ARHGEF28-212ENST00000513042 CHD7Q9P2D1 2997 aa9.86□□□□□ -0.83
ARHGEF28-212ENST00000513042 A8MUU9 505 aa9.84□□□□□ -0.83
ARHGEF28-212ENST00000513042 ATRQ13535 2644 aa9.84□□□□□ -0.83
ARHGEF28-212ENST00000513042 KRTAP25-1Q3LHN0 102 aa9.83□□□□□ -0.84
ARHGEF28-212ENST00000513042 ASB16-AS1Q495Z4 193 aa9.83□□□□□ -0.84
ARHGEF28-212ENST00000513042 C20orf166-AS1Q96NR2 134 aa9.83□□□□□ -0.84
ARHGEF28-212ENST00000513042 PCNTO95613 3336 aa9.82□□□□□ -0.84
ARHGEF28-212ENST00000513042 KRTAP7-1Q8IUC3 87 aa9.81□□□□□ -0.84
ARHGEF28-212ENST00000513042 FLNBO75369 2602 aaKnown RBP9.79□□□□□ -0.84
ARHGEF28-212ENST00000513042 A6NN06 94 aa9.79□□□□□ -0.84
ARHGEF28-212ENST00000513042 KRTAP13-2Q52LG2 175 aa9.75□□□□□ -0.85
ARHGEF28-212ENST00000513042 Q6ZRN7 208 aaPredicted RBP9.75□□□□□ -0.85
ARHGEF28-212ENST00000513042 CFAP54Q96N23 3096 aa9.74□□□□□ -0.85
ARHGEF28-212ENST00000513042 KRTAP16-1A8MUX0 517 aa9.74□□□□□ -0.85
ARHGEF28-212ENST00000513042 MAST4O15021 2626 aa9.71□□□□□ -0.86
ARHGEF28-212ENST00000513042 MKI67P46013 3256 aaKnown RBP9.69□□□□□ -0.86
ARHGEF28-212ENST00000513042 RPS29P62273 56 aaKnown RBP9.69□□□□□ -0.86
ARHGEF28-212ENST00000513042 HELZ2Q9BYK8 2649 aaKnown RBP9.67□□□□□ -0.86
ARHGEF28-212ENST00000513042 CFAP46Q8IYW2 2715 aa9.63□□□□□ -0.87
ARHGEF28-212ENST00000513042 NDUFAF8A1L188 74 aa9.63□□□□□ -0.87
ARHGEF28-212ENST00000513042 KRTAP13-1Q8IUC0 172 aa9.61□□□□□ -0.87
ARHGEF28-212ENST00000513042 CHD9Q3L8U1 2897 aa9.58□□□□□ -0.88
ARHGEF28-212ENST00000513042 CHD6Q8TD26 2715 aa9.57□□□□□ -0.88
ARHGEF28-212ENST00000513042 C10orf95Q9H7T3 257 aa9.56□□□□□ -0.88
ARHGEF28-212ENST00000513042 A0A0C4DFX4 3053 aa9.55□□□□□ -0.88
ARHGEF28-212ENST00000513042 MGAQ8IWI9 3026 aa9.55□□□□□ -0.88
ARHGEF28-212ENST00000513042 HTTP42858 3142 aa9.51□□□□□ -0.89
ARHGEF28-212ENST00000513042 NBEAL1Q6ZS30 2694 aa9.51□□□□□ -0.89
ARHGEF28-212ENST00000513042 TNP1P09430 55 aa9.49□□□□□ -0.89
ARHGEF28-212ENST00000513042 FLG2Q5D862 2391 aaPredicted RBP9.49□□□□□ -0.89
ARHGEF28-212ENST00000513042 AKAP13Q12802 2813 aa9.48□□□□□ -0.89
ARHGEF28-212ENST00000513042 TRIOO75962 3097 aa9.47□□□□□ -0.89
ARHGEF28-212ENST00000513042 TEX15Q9BXT5 2789 aa9.47□□□□□ -0.89
ARHGEF28-212ENST00000513042 DMBT1Q9UGM3 2413 aaPredicted RBP9.46□□□□□ -0.9
ARHGEF28-212ENST00000513042 GCN1Q92616 2671 aaKnown RBP9.44□□□□□ -0.9
ARHGEF28-212ENST00000513042 LAMA3Q16787 3333 aa9.42□□□□□ -0.9
ARHGEF28-212ENST00000513042 A0A1B0GVY2 172 aa9.39□□□□□ -0.91
ARHGEF28-212ENST00000513042 BRCA2P51587 3418 aa9.38□□□□□ -0.91
ARHGEF28-212ENST00000513042 XIRP2A4UGR9 3374 aa9.38□□□□□ -0.91
ARHGEF28-212ENST00000513042 STAB1Q9NY15 2570 aa9.36□□□□□ -0.91
ARHGEF28-212ENST00000513042 LAMA2P24043 3122 aaKnown RBP9.36□□□□□ -0.91
ARHGEF28-212ENST00000513042 RANBP2P49792 3224 aaKnown RBP9.35□□□□□ -0.91
ARHGEF28-212ENST00000513042 CENPEQ02224 2701 aa9.34□□□□□ -0.91
ARHGEF28-212ENST00000513042 UNC79Q9P2D8 2635 aa9.34□□□□□ -0.91
ARHGEF28-212ENST00000513042 NBEAL2Q6ZNJ1 2754 aa9.34□□□□□ -0.91
ARHGEF28-212ENST00000513042 CELSR3Q9NYQ7 3312 aa9.31□□□□□ -0.92
ARHGEF28-212ENST00000513042 WDFY4Q6ZS81 3184 aa9.31□□□□□ -0.92
ARHGEF28-212ENST00000513042 UNC80Q8N2C7 3258 aa9.3□□□□□ -0.92
ARHGEF28-212ENST00000513042 KRTAP10-8P60410 259 aa9.3□□□□□ -0.92
ARHGEF28-212ENST00000513042 TRANK1O15050 2925 aa9.26□□□□□ -0.93
ARHGEF28-212ENST00000513042 TEP1Q99973 2627 aaKnown RBP9.25□□□□□ -0.93
ARHGEF28-212ENST00000513042 XP32Q5T750 250 aa9.24□□□□□ -0.93
ARHGEF28-212ENST00000513042 FREM2Q5SZK8 3169 aa9.24□□□□□ -0.93
ARHGEF28-212ENST00000513042 CDH23Q9H251 3354 aa9.22□□□□□ -0.93
ARHGEF28-212ENST00000513042 PRUNE2Q8WUY3 3088 aa9.21□□□□□ -0.94
ARHGEF28-212ENST00000513042 FRYQ5TBA9 3013 aa9.21□□□□□ -0.94
ARHGEF28-212ENST00000513042 DNAH14Q0VDD8 3507 aa9.19□□□□□ -0.94
ARHGEF28-212ENST00000513042 H0YAA0 97 aa9.17□□□□□ -0.94
ARHGEF28-212ENST00000513042 KRTAP1-4P0C5Y4 121 aa9.16□□□□□ -0.94
ARHGEF28-212ENST00000513042 SETXQ7Z333 2677 aaKnown RBP9.15□□□□□ -0.94
ARHGEF28-212ENST00000513042 COL6A5A8TX70 2615 aa9.14□□□□□ -0.95
ARHGEF28-212ENST00000513042 PP632Q6XCG6 107 aa9.09□□□□□ -0.95
ARHGEF28-212ENST00000513042 NOTCH1P46531 2555 aa9.09□□□□□ -0.95
ARHGEF28-212ENST00000513042 ZNF292O60281 2723 aa9.07□□□□□ -0.96
ARHGEF28-212ENST00000513042 KALRNO60229 2985 aa9.07□□□□□ -0.96
ARHGEF28-212ENST00000513042 VPS13AQ96RL7 3174 aa9.06□□□□□ -0.96
ARHGEF28-212ENST00000513042 COL6A3P12111 3177 aa9.06□□□□□ -0.96
ARHGEF28-212ENST00000513042 STAB2Q8WWQ8 2551 aa9.05□□□□□ -0.96
ARHGEF28-212ENST00000513042 DSPP15924 2871 aaKnown RBP9.04□□□□□ -0.96
ARHGEF28-212ENST00000513042 ITPR2Q14571 2701 aa9.02□□□□□ -0.96
ARHGEF28-212ENST00000513042 KRTAP10-10P60014 251 aa9.02□□□□□ -0.97
ARHGEF28-212ENST00000513042 IGSF10Q6WRI0 2623 aa9.01□□□□□ -0.97
ARHGEF28-212ENST00000513042 P0C880 135 aa9□□□□□ -0.97
ARHGEF28-212ENST00000513042 SZT2Q5T011 3432 aa8.98□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 149.8 ms