RNA–Protein interactions for RNA: ENST00000512844.5

CHD1-209, Transcript of chromodomain helicase DNA binding protein 1, humanhuman

TSL 5

Gene CHD1, Length 848 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1-209ENST00000512844 PCNX1Q96RV3 2341 aa1.95□□□□□ -2.1
CHD1-209ENST00000512844 EP300Q09472 2414 aaPredicted RBP1.95□□□□□ -2.1
CHD1-209ENST00000512844 TRBV7-4A0A0J9YYF1 115 aa1.95□□□□□ -2.1
CHD1-209ENST00000512844 DEFB130BP0DP73 79 aa1.95□□□□□ -2.1
CHD1-209ENST00000512844 DEFB130AP0DP74 79 aa1.95□□□□□ -2.1
CHD1-209ENST00000512844 C10orf99Q6UWK7 81 aa1.95□□□□□ -2.1
CHD1-209ENST00000512844 RANBP2P49792 3224 aaKnown RBP1.95□□□□□ -2.1
CHD1-209ENST00000512844 UNC80Q8N2C7 3258 aa1.95□□□□□ -2.1
CHD1-209ENST00000512844 CREBBPQ92793 2442 aa1.95□□□□□ -2.1
CHD1-209ENST00000512844 TLN1Q9Y490 2541 aaKnown RBP1.94□□□□□ -2.1
CHD1-209ENST00000512844 SPTBN1Q01082 2364 aaKnown RBP1.94□□□□□ -2.1
CHD1-209ENST00000512844 REV3LO60673 3130 aa1.94□□□□□ -2.1
CHD1-209ENST00000512844 LELP1Q5T871 98 aa1.94□□□□□ -2.1
CHD1-209ENST00000512844 Q6ZRN7 208 aaPredicted RBP1.94□□□□□ -2.1
CHD1-209ENST00000512844 WFDC9Q8NEX5 89 aa1.94□□□□□ -2.1
CHD1-209ENST00000512844 ANKRD11Q6UB99 2663 aaPredicted RBP1.94□□□□□ -2.1
CHD1-209ENST00000512844 SORL1Q92673 2214 aa1.94□□□□□ -2.1
CHD1-209ENST00000512844 DOPEY2Q9Y3R5 2298 aa1.93□□□□□ -2.1
CHD1-209ENST00000512844 ETDCA0A1B0GVM5 59 aa1.93□□□□□ -2.1
CHD1-209ENST00000512844 SPART-AS1P0CW21 52 aa1.93□□□□□ -2.1
CHD1-209ENST00000512844 CLPSL2Q6UWE3 100 aa1.93□□□□□ -2.1
CHD1-209ENST00000512844 LINC00208Q96KT6 92 aa1.93□□□□□ -2.1
CHD1-209ENST00000512844 BDP1A6H8Y1 2624 aa1.93□□□□□ -2.1
CHD1-209ENST00000512844 GVINP1Q7Z2Y8 2422 aa1.92□□□□□ -2.1
CHD1-209ENST00000512844 TRIOO75962 3097 aa1.92□□□□□ -2.1
CHD1-209ENST00000512844 CDH23Q9H251 3354 aa1.92□□□□□ -2.1
CHD1-209ENST00000512844 COL6A6A6NMZ7 2263 aa1.92□□□□□ -2.1
CHD1-209ENST00000512844 A0A087WTM6 91 aa1.92□□□□□ -2.1
CHD1-209ENST00000512844 ACYP2P14621 99 aa1.92□□□□□ -2.1
CHD1-209ENST00000512844 UNQ6190/PRO20217Q6UXQ8 127 aa1.92□□□□□ -2.1
CHD1-209ENST00000512844 CRCT1Q9UGL9 99 aa1.92□□□□□ -2.1
CHD1-209ENST00000512844 PTPRQQ9UMZ3 2332 aa1.92□□□□□ -2.1
CHD1-209ENST00000512844 NBEAQ8NFP9 2946 aa1.92□□□□□ -2.1
CHD1-209ENST00000512844 XIRP2A4UGR9 3374 aa1.92□□□□□ -2.1
CHD1-209ENST00000512844 LAMA3Q16787 3333 aa1.91□□□□□ -2.1
CHD1-209ENST00000512844 DNAH14Q0VDD8 3507 aa1.91□□□□□ -2.1
CHD1-209ENST00000512844 A0A096LNT2 108 aa1.91□□□□□ -2.1
CHD1-209ENST00000512844 H3BNG1 76 aa1.91□□□□□ -2.1
CHD1-209ENST00000512844 KRTAP21-3Q3LHN1 58 aa1.91□□□□□ -2.1
CHD1-209ENST00000512844 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP1.9□□□□□ -2.1
CHD1-209ENST00000512844 MED13LQ71F56 2210 aa1.9□□□□□ -2.1
CHD1-209ENST00000512844 SPTAN1Q13813 2472 aaKnown RBP1.9□□□□□ -2.11
CHD1-209ENST00000512844 VCANP13611 3396 aa1.9□□□□□ -2.11
CHD1-209ENST00000512844 IGLV5-48A0A075B6I7 105 aa1.9□□□□□ -2.11
CHD1-209ENST00000512844 KCNQ1DNQ9H478 68 aa1.9□□□□□ -2.11
CHD1-209ENST00000512844 DSPP15924 2871 aaKnown RBP1.9□□□□□ -2.11
CHD1-209ENST00000512844 RIF1Q5UIP0 2472 aaKnown RBP1.9□□□□□ -2.11
CHD1-209ENST00000512844 SZT2Q5T011 3432 aa1.89□□□□□ -2.11
CHD1-209ENST00000512844 TTC28Q96AY4 2481 aa1.89□□□□□ -2.11
CHD1-209ENST00000512844 A0A096LPF7 62 aa1.89□□□□□ -2.11
CHD1-209ENST00000512844 LCE6AA0A183 80 aa1.89□□□□□ -2.11
CHD1-209ENST00000512844 H0Y9P7 68 aa1.89□□□□□ -2.11
CHD1-209ENST00000512844 HTN3P15516 51 aa1.89□□□□□ -2.11
CHD1-209ENST00000512844 C6orf48Q9UBA6 75 aa1.89□□□□□ -2.11
CHD1-209ENST00000512844 AKAP6Q13023 2319 aa1.89□□□□□ -2.11
CHD1-209ENST00000512844 ZZEF1O43149 2961 aa1.89□□□□□ -2.11
CHD1-209ENST00000512844 CEP295Q9C0D2 2601 aa1.88□□□□□ -2.11
CHD1-209ENST00000512844 FRYQ5TBA9 3013 aa1.88□□□□□ -2.11
CHD1-209ENST00000512844 TNRC18O15417 2968 aaPredicted RBP1.88□□□□□ -2.11
CHD1-209ENST00000512844 DEFB135Q30KP9 77 aa1.88□□□□□ -2.11
CHD1-209ENST00000512844 PCOTHQ58A44 107 aa1.88□□□□□ -2.11
CHD1-209ENST00000512844 Q6ZRX8 168 aa1.88□□□□□ -2.11
CHD1-209ENST00000512844 DEFB105AQ8NG35 78 aa1.88□□□□□ -2.11
CHD1-209ENST00000512844 SPRR4Q96PI1 79 aa1.88□□□□□ -2.11
CHD1-209ENST00000512844 CFAP54Q96N23 3096 aa1.88□□□□□ -2.11
CHD1-209ENST00000512844 ABCA2Q9BZC7 2435 aa1.88□□□□□ -2.11
CHD1-209ENST00000512844 VPS13AQ96RL7 3174 aa1.88□□□□□ -2.11
CHD1-209ENST00000512844 LINC01556Q5JQF7 62 aa1.87□□□□□ -2.11
CHD1-209ENST00000512844 Q96NJ1 140 aa1.87□□□□□ -2.11
CHD1-209ENST00000512844 TP53AIP1Q9HCN2 124 aa1.87□□□□□ -2.11
CHD1-209ENST00000512844 ZNF292O60281 2723 aa1.87□□□□□ -2.11
CHD1-209ENST00000512844 DOPEY1Q5JWR5 2465 aa1.86□□□□□ -2.11
CHD1-209ENST00000512844 SPTBN5Q9NRC6 3674 aaKnown RBP1.86□□□□□ -2.11
CHD1-209ENST00000512844 FRYLO94915 3013 aa1.86□□□□□ -2.11
CHD1-209ENST00000512844 HIVEP3Q5T1R4 2406 aa1.86□□□□□ -2.11
CHD1-209ENST00000512844 NBASA2RRP1 2371 aa1.86□□□□□ -2.11
CHD1-209ENST00000512844 HMCN1Q96RW7 5635 aa1.86□□□□□ -2.11
CHD1-209ENST00000512844 FREM2Q5SZK8 3169 aa1.85□□□□□ -2.11
CHD1-209ENST00000512844 PRUNE2Q8WUY3 3088 aa1.85□□□□□ -2.11
CHD1-209ENST00000512844 MYO9AB2RTY4 2548 aa1.85□□□□□ -2.11
CHD1-209ENST00000512844 CSPG4Q6UVK1 2322 aa1.85□□□□□ -2.11
CHD1-209ENST00000512844 IGF2RP11717 2491 aa1.84□□□□□ -2.11
CHD1-209ENST00000512844 C2CD3Q4AC94 2353 aa1.84□□□□□ -2.11
CHD1-209ENST00000512844 K7EQZ3 153 aa1.84□□□□□ -2.11
CHD1-209ENST00000512844 SPRR1AP35321 89 aa1.84□□□□□ -2.11
CHD1-209ENST00000512844 SPATA8Q6RVD6 105 aa1.84□□□□□ -2.11
CHD1-209ENST00000512844 WFDC10BQ8IUB3 73 aa1.84□□□□□ -2.11
CHD1-209ENST00000512844 WFDC13Q8IUB5 93 aa1.84□□□□□ -2.11
CHD1-209ENST00000512844 WNK1Q9H4A3 2382 aa1.84□□□□□ -2.12
CHD1-209ENST00000512844 NAV2Q8IVL1 2488 aa1.83□□□□□ -2.12
CHD1-209ENST00000512844 ADGRG4Q8IZF6 3080 aa1.83□□□□□ -2.12
CHD1-209ENST00000512844 USP34Q70CQ2 3546 aa1.83□□□□□ -2.12
CHD1-209ENST00000512844 DEFB131BA0A096LNP1 70 aa1.83□□□□□ -2.12
CHD1-209ENST00000512844 DEFB4AO15263 64 aa1.83□□□□□ -2.12
CHD1-209ENST00000512844 PLAC4Q8WY50 150 aa1.83□□□□□ -2.12
CHD1-209ENST00000512844 HRNRQ86YZ3 2850 aaPredicted RBP1.83□□□□□ -2.12
CHD1-209ENST00000512844 ACACBO00763 2458 aa1.82□□□□□ -2.12
CHD1-209ENST00000512844 AKAP13Q12802 2813 aa1.82□□□□□ -2.12
CHD1-209ENST00000512844 TACC2O95359 2948 aa1.82□□□□□ -2.12
CHD1-209ENST00000512844 ANKRD17O75179 2603 aaKnown RBP1.82□□□□□ -2.12
Retrieved 100 of 20,778 RNA–protein pairs in 54.9 ms