RNA–Protein interactions for RNA: ENST00000511426.5

SCLT1-209, Transcript of sodium channel and clathrin linker 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SCLT1, Length 1,696 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCLT1-209ENST00000511426 CDIP1Q9H305 208 aa9.27□□□□□ -0.93
SCLT1-209ENST00000511426 DNAH8Q96JB1 4490 aa9.27□□□□□ -0.93
SCLT1-209ENST00000511426 A0A1B0GV72 72 aa9.26□□□□□ -0.93
SCLT1-209ENST00000511426 RYR2Q92736 4967 aa9.26□□□□□ -0.93
SCLT1-209ENST00000511426 Q6JHZ5 121 aa9.24□□□□□ -0.93
SCLT1-209ENST00000511426 C3orf22Q8N5N4 141 aa9.24□□□□□ -0.93
SCLT1-209ENST00000511426 RPL37AP61513 92 aaKnown RBP9.23□□□□□ -0.93
SCLT1-209ENST00000511426 KRTAP3-3Q9BYR6 98 aa9.22□□□□□ -0.93
SCLT1-209ENST00000511426 KRTAP3-2Q9BYR7 98 aa9.22□□□□□ -0.93
SCLT1-209ENST00000511426 LINC00643Q86TS7 51 aa9.21□□□□□ -0.93
SCLT1-209ENST00000511426 KMT2CQ8NEZ4 4911 aaKnown RBP9.21□□□□□ -0.94
SCLT1-209ENST00000511426 XGP55808 180 aa9.2□□□□□ -0.94
SCLT1-209ENST00000511426 Q8NBF4 154 aa9.2□□□□□ -0.94
SCLT1-209ENST00000511426 SIGMAR1Q99720 223 aa9.2□□□□□ -0.94
SCLT1-209ENST00000511426 UBL5Q9BZL1 73 aa9.2□□□□□ -0.94
SCLT1-209ENST00000511426 LINC00846Q9NV44 126 aa9.2□□□□□ -0.94
SCLT1-209ENST00000511426 HAMPP81172 84 aa9.18□□□□□ -0.94
SCLT1-209ENST00000511426 IGFL1Q6UW32 110 aa9.16□□□□□ -0.94
SCLT1-209ENST00000511426 ATP5EP2Q5VTU8 51 aa9.16□□□□□ -0.94
SCLT1-209ENST00000511426 Q6Q795 121 aa9.16□□□□□ -0.94
SCLT1-209ENST00000511426 CRYGAP11844 174 aa9.15□□□□□ -0.94
SCLT1-209ENST00000511426 A0A1W2PNM2 257 aa9.14□□□□□ -0.95
SCLT1-209ENST00000511426 FAM229BQ4G0N7 80 aa9.13□□□□□ -0.95
SCLT1-209ENST00000511426 IMUPQ9GZP8 106 aa9.13□□□□□ -0.95
SCLT1-209ENST00000511426 SPINK6Q6UWN8 80 aa9.13□□□□□ -0.95
SCLT1-209ENST00000511426 LRP1BQ9NZR2 4599 aa9.12□□□□□ -0.95
SCLT1-209ENST00000511426 TRBV7-7A0A0K0K1E9 115 aa9.11□□□□□ -0.95
SCLT1-209ENST00000511426 CDK2AP2O75956 126 aa9.11□□□□□ -0.95
SCLT1-209ENST00000511426 C9orf153Q5TBE3 101 aa9.1□□□□□ -0.95
SCLT1-209ENST00000511426 Q6ZVQ6 151 aa9.1□□□□□ -0.95
SCLT1-209ENST00000511426 MT-ATP8P03928 68 aa9.1□□□□□ -0.95
SCLT1-209ENST00000511426 IGLV9-49A0A0B4J1Y8 123 aa9.09□□□□□ -0.95
SCLT1-209ENST00000511426 SSBP3-AS1Q7Z2R9 100 aa9.08□□□□□ -0.96
SCLT1-209ENST00000511426 DYNC1H1Q14204 4646 aaKnown RBP9.08□□□□□ -0.96
SCLT1-209ENST00000511426 CXCL6P80162 114 aa9.07□□□□□ -0.96
SCLT1-209ENST00000511426 NREPQ16612 68 aa9.07□□□□□ -0.96
SCLT1-209ENST00000511426 PKHD1P08F94 4074 aa9.07□□□□□ -0.96
SCLT1-209ENST00000511426 SCGB1A1P11684 91 aa9.07□□□□□ -0.96
SCLT1-209ENST00000511426 MOBPQ13875 183 aa9.06□□□□□ -0.96
SCLT1-209ENST00000511426 CD164Q04900 197 aa9.04□□□□□ -0.96
SCLT1-209ENST00000511426 PLA2G1BP04054 148 aaKnown RBP9.04□□□□□ -0.96
SCLT1-209ENST00000511426 SMR3BP02814 79 aaPredicted RBP9.03□□□□□ -0.96
SCLT1-209ENST00000511426 KRTAP1-4P0C5Y4 121 aa9.03□□□□□ -0.96
SCLT1-209ENST00000511426 FAM229AH3BQW9 127 aa9.02□□□□□ -0.97
SCLT1-209ENST00000511426 ANAPC11Q9NYG5 84 aa9.02□□□□□ -0.97
SCLT1-209ENST00000511426 SS18L2Q9UHA2 77 aa9.02□□□□□ -0.97
SCLT1-209ENST00000511426 A0A087WSZ3 146 aa9.01□□□□□ -0.97
SCLT1-209ENST00000511426 KRTAP10-4P60372 401 aaPredicted RBP9.01□□□□□ -0.97
SCLT1-209ENST00000511426 RYR3Q15413 4870 aa8.99□□□□□ -0.97
SCLT1-209ENST00000511426 APOBP04114 4563 aaKnown RBP8.98□□□□□ -0.97
SCLT1-209ENST00000511426 IGKV3D-7A0A0C4DH55 119 aa8.98□□□□□ -0.97
SCLT1-209ENST00000511426 A0A0G2JQZ4 141 aa8.98□□□□□ -0.97
SCLT1-209ENST00000511426 BPY2O14599 106 aa8.98□□□□□ -0.97
SCLT1-209ENST00000511426 A0A087X002 238 aa8.97□□□□□ -0.97
SCLT1-209ENST00000511426 KRTAP13-2Q52LG2 175 aa8.95□□□□□ -0.98
SCLT1-209ENST00000511426 SRRM2Q9UQ35 2752 aaKnown RBP8.95□□□□□ -0.98
SCLT1-209ENST00000511426 J3KT08 172 aa8.94□□□□□ -0.98
SCLT1-209ENST00000511426 VPS13BQ7Z7G8 4022 aa8.93□□□□□ -0.98
SCLT1-209ENST00000511426 Q5XG85 94 aa8.92□□□□□ -0.98
SCLT1-209ENST00000511426 HIST1H4AP62805 103 aaKnown RBP8.91□□□□□ -0.98
SCLT1-209ENST00000511426 LINC00472Q9H8W2 130 aa8.91□□□□□ -0.98
SCLT1-209ENST00000511426 ASB16-AS1Q495Z4 193 aa8.91□□□□□ -0.98
SCLT1-209ENST00000511426 TYMSOSQ8TAI1 123 aa8.91□□□□□ -0.98
SCLT1-209ENST00000511426 Q5VSD8 79 aa8.9□□□□□ -0.98
SCLT1-209ENST00000511426 SPAG11AQ6PDA7 123 aa8.88□□□□□ -0.99
SCLT1-209ENST00000511426 RPS29P62273 56 aaKnown RBP8.88□□□□□ -0.99
SCLT1-209ENST00000511426 HRCT1Q6UXD1 115 aa8.88□□□□□ -0.99
SCLT1-209ENST00000511426 LIMD2Q9BT23 127 aa8.88□□□□□ -0.99
SCLT1-209ENST00000511426 FAM236AA0A1B0GUQ0 79 aa8.87□□□□□ -0.99
SCLT1-209ENST00000511426 FAM236BA0A1B0GV22 79 aa8.87□□□□□ -0.99
SCLT1-209ENST00000511426 SPINK1P00995 79 aa8.87□□□□□ -0.99
SCLT1-209ENST00000511426 C4orf48Q5BLP8 95 aa8.87□□□□□ -0.99
SCLT1-209ENST00000511426 DSCR10P59022 87 aa8.86□□□□□ -0.99
SCLT1-209ENST00000511426 IGKV4-1P06312 121 aa8.85□□□□□ -0.99
SCLT1-209ENST00000511426 Q8N1X5 172 aa8.85□□□□□ -0.99
SCLT1-209ENST00000511426 A0A087WVE0 104 aa8.84□□□□□ -0.99
SCLT1-209ENST00000511426 A8MWP4 228 aa8.84□□□□□ -0.99
SCLT1-209ENST00000511426 ATOX1O00244 68 aa8.83□□□□□ -1
SCLT1-209ENST00000511426 PRR26Q8N8Z3 221 aa8.83□□□□□ -1
SCLT1-209ENST00000511426 Q96NJ1 140 aa8.83□□□□□ -1
SCLT1-209ENST00000511426 NDUFB1O75438 58 aa8.82□□□□□ -1
SCLT1-209ENST00000511426 LINC00304Q8N9R0 145 aa8.81□□□□□ -1
SCLT1-209ENST00000511426 K7EQZ3 153 aa8.81□□□□□ -1
SCLT1-209ENST00000511426 FAT1Q14517 4588 aa8.81□□□□□ -1
SCLT1-209ENST00000511426 PRR15Q8IV56 129 aa8.79□□□□□ -1
SCLT1-209ENST00000511426 Q8N9L7 120 aa8.78□□□□□ -1
SCLT1-209ENST00000511426 PCP4P48539 62 aa8.78□□□□□ -1
SCLT1-209ENST00000511426 DEFB116Q30KQ4 102 aa8.78□□□□□ -1
SCLT1-209ENST00000511426 SMIM20Q8N5G0 67 aa8.78□□□□□ -1
SCLT1-209ENST00000511426 HSPG2P98160 4391 aa8.76□□□□□ -1.01
SCLT1-209ENST00000511426 ANAPC13Q9BS18 74 aa8.76□□□□□ -1.01
SCLT1-209ENST00000511426 RYR1P21817 5038 aa8.75□□□□□ -1.01
SCLT1-209ENST00000511426 HCG22E2RYF7 251 aa8.75□□□□□ -1.01
SCLT1-209ENST00000511426 A0A1B0GVX0 72 aa8.72□□□□□ -1.01
SCLT1-209ENST00000511426 C1orf195Q5TG92 126 aa8.72□□□□□ -1.01
SCLT1-209ENST00000511426 KRTAP10-8P60410 259 aa8.69□□□□□ -1.02
SCLT1-209ENST00000511426 C8orf87E5RJ46 101 aa8.69□□□□□ -1.02
SCLT1-209ENST00000511426 SERP2Q8N6R1 65 aa8.69□□□□□ -1.02
SCLT1-209ENST00000511426 PKHD1L1Q86WI1 4243 aa8.68□□□□□ -1.02
SCLT1-209ENST00000511426 KRTAP29-1A8MX34 341 aaPredicted RBP8.67□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 48.8 ms