RNA–Protein interactions for RNA: ENST00000505998.5

NIPBL-205, Transcript of NIPBL, cohesin loading factor, humanhuman

TSL 5

Gene NIPBL, Length 969 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIPBL-205ENST00000505998 SMCR5Q8TEV8 140 aa3.09□□□□□ -1.91
NIPBL-205ENST00000505998 HYDINQ4G0P3 5121 aa3.09□□□□□ -1.91
NIPBL-205ENST00000505998 TRAV8-3A0A0A6YYJ7 113 aa3.08□□□□□ -1.92
NIPBL-205ENST00000505998 TRAV16A0A0A6YYK6 109 aaPredicted RBP3.08□□□□□ -1.92
NIPBL-205ENST00000505998 K7EMI3 77 aa3.08□□□□□ -1.92
NIPBL-205ENST00000505998 PSPHP1O15172 72 aa3.08□□□□□ -1.92
NIPBL-205ENST00000505998 PPP1R17O96001 155 aa3.08□□□□□ -1.92
NIPBL-205ENST00000505998 COX6CP09669 75 aa3.08□□□□□ -1.92
NIPBL-205ENST00000505998 ESRGQ1W209 222 aa3.08□□□□□ -1.92
NIPBL-205ENST00000505998 MRPL51Q4U2R6 128 aaKnown RBP3.08□□□□□ -1.92
NIPBL-205ENST00000505998 LYPD5Q6UWN5 251 aa3.08□□□□□ -1.92
NIPBL-205ENST00000505998 MRPL35Q9NZE8 188 aaKnown RBP3.08□□□□□ -1.92
NIPBL-205ENST00000505998 DNAH17Q9UFH2 4485 aa3.08□□□□□ -1.92
NIPBL-205ENST00000505998 FAT2Q9NYQ8 4349 aa3.07□□□□□ -1.92
NIPBL-205ENST00000505998 DNAH2Q9P225 4427 aa3.07□□□□□ -1.92
NIPBL-205ENST00000505998 TRAV7A0A075B6U4 112 aa3.07□□□□□ -1.92
NIPBL-205ENST00000505998 IGHV3-33P01772 117 aa3.07□□□□□ -1.92
NIPBL-205ENST00000505998 FUSP35637 526 aaKnown RBP eCLIP3.07□□□□□ -1.92
NIPBL-205ENST00000505998 CIRBPQ14011 172 aaKnown RBP3.07□□□□□ -1.92
NIPBL-205ENST00000505998 Q1T7F1 81 aa3.07□□□□□ -1.92
NIPBL-205ENST00000505998 FAM19A3Q7Z5A8 133 aa3.07□□□□□ -1.92
NIPBL-205ENST00000505998 C20orf197Q8N268 126 aa3.07□□□□□ -1.92
NIPBL-205ENST00000505998 CIRBP-AS1Q8TBR5 109 aa3.07□□□□□ -1.92
NIPBL-205ENST00000505998 LINC00474Q9P2X8 69 aa3.07□□□□□ -1.92
NIPBL-205ENST00000505998 ICOSQ9Y6W8 199 aa3.07□□□□□ -1.92
NIPBL-205ENST00000505998 DNAH10Q8IVF4 4471 aa3.07□□□□□ -1.92
NIPBL-205ENST00000505998 TRAV12-1A0A0B4J245 112 aa3.06□□□□□ -1.92
NIPBL-205ENST00000505998 TRGV4A0A0C4DH28 118 aa3.06□□□□□ -1.92
NIPBL-205ENST00000505998 SDHAF1A6NFY7 115 aa3.06□□□□□ -1.92
NIPBL-205ENST00000505998 COX7A2LO14548 114 aa3.06□□□□□ -1.92
NIPBL-205ENST00000505998 MP68P56378 58 aa3.06□□□□□ -1.92
NIPBL-205ENST00000505998 S100A7L2Q5SY68 101 aa3.06□□□□□ -1.92
NIPBL-205ENST00000505998 FAM74A4Q5TZK3 123 aa3.06□□□□□ -1.92
NIPBL-205ENST00000505998 SFTA2Q6UW10 78 aa3.06□□□□□ -1.92
NIPBL-205ENST00000505998 ORMDL3Q8N138 153 aa3.06□□□□□ -1.92
NIPBL-205ENST00000505998 DIRC1Q969H9 104 aa3.06□□□□□ -1.92
NIPBL-205ENST00000505998 TTTY13Q9BZ97 58 aa3.06□□□□□ -1.92
NIPBL-205ENST00000505998 RYR3Q15413 4870 aa3.05□□□□□ -1.92
NIPBL-205ENST00000505998 HECTD4Q9Y4D8 3996 aa3.05□□□□□ -1.92
NIPBL-205ENST00000505998 TRBV6-8A0A0A6YYG3 113 aa3.05□□□□□ -1.92
NIPBL-205ENST00000505998 TRBV10-3A0A0K0K1G6 114 aa3.05□□□□□ -1.92
NIPBL-205ENST00000505998 D6R8Y8 96 aa3.05□□□□□ -1.92
NIPBL-205ENST00000505998 LINC01556Q5JQF7 62 aa3.05□□□□□ -1.92
NIPBL-205ENST00000505998 LCE1CQ5T751 118 aa3.05□□□□□ -1.92
NIPBL-205ENST00000505998 LCE1BQ5T7P3 118 aa3.05□□□□□ -1.92
NIPBL-205ENST00000505998 LELP1Q5T871 98 aa3.05□□□□□ -1.92
NIPBL-205ENST00000505998 ATP11AUNQ6ZP68 121 aa3.05□□□□□ -1.92
NIPBL-205ENST00000505998 RPL39LQ96EH5 51 aaKnown RBP3.05□□□□□ -1.92
NIPBL-205ENST00000505998 TIMM21Q9BVV7 248 aa3.05□□□□□ -1.92
NIPBL-205ENST00000505998 SMIM2Q9BVW6 85 aa3.05□□□□□ -1.92
NIPBL-205ENST00000505998 UBE2D4Q9Y2X8 147 aa3.05□□□□□ -1.92
NIPBL-205ENST00000505998 IGHV3-73A0A0B4J1V6 119 aa3.04□□□□□ -1.92
NIPBL-205ENST00000505998 LCE6AA0A183 80 aa3.04□□□□□ -1.92
NIPBL-205ENST00000505998 LOC389332A0A1B0GUA5 103 aa3.04□□□□□ -1.92
NIPBL-205ENST00000505998 ZNF815PA8K554 130 aa3.04□□□□□ -1.92
NIPBL-205ENST00000505998 F8VRH5 84 aa3.04□□□□□ -1.92
NIPBL-205ENST00000505998 F8WEM9 126 aa3.04□□□□□ -1.92
NIPBL-205ENST00000505998 I3L3M4 83 aa3.04□□□□□ -1.92
NIPBL-205ENST00000505998 IGHV3-30P01768 117 aa3.04□□□□□ -1.92
NIPBL-205ENST00000505998 IGHV3-30-5P0DP03 117 aa3.04□□□□□ -1.92
NIPBL-205ENST00000505998 KRTAP5-2Q701N4 177 aa3.04□□□□□ -1.92
NIPBL-205ENST00000505998 SPANXA2-OT1Q8N9U9 137 aa3.04□□□□□ -1.92
NIPBL-205ENST00000505998 RMI2Q96E14 147 aa3.04□□□□□ -1.92
NIPBL-205ENST00000505998 A0A0J9YY99 117 aa3.03□□□□□ -1.92
NIPBL-205ENST00000505998 DNAL4O96015 105 aa3.03□□□□□ -1.92
NIPBL-205ENST00000505998 MGPP08493 103 aa3.03□□□□□ -1.92
NIPBL-205ENST00000505998 CCL18P55774 89 aa3.03□□□□□ -1.92
NIPBL-205ENST00000505998 LINC00313P59037 77 aa3.03□□□□□ -1.92
NIPBL-205ENST00000505998 Q6ZRN7 208 aaPredicted RBP3.03□□□□□ -1.92
NIPBL-205ENST00000505998 DNAH11Q96DT5 4516 aa3.02□□□□□ -1.93
NIPBL-205ENST00000505998 A6NN06 94 aa3.02□□□□□ -1.93
NIPBL-205ENST00000505998 ERC2-IT1O76042 136 aa3.02□□□□□ -1.93
NIPBL-205ENST00000505998 HTN3P15516 51 aa3.02□□□□□ -1.93
NIPBL-205ENST00000505998 C6orf99Q4VX62 202 aa3.02□□□□□ -1.93
NIPBL-205ENST00000505998 WFDC10BQ8IUB3 73 aa3.02□□□□□ -1.93
NIPBL-205ENST00000505998 PKD1P98161 4303 aa3.02□□□□□ -1.93
NIPBL-205ENST00000505998 IGIPA6NJ69 53 aa3.01□□□□□ -1.93
NIPBL-205ENST00000505998 KRTAP13-2Q52LG2 175 aa3.01□□□□□ -1.93
NIPBL-205ENST00000505998 LINC01554Q52M75 96 aa3.01□□□□□ -1.93
NIPBL-205ENST00000505998 KRTAP26-1Q6PEX3 210 aa3.01□□□□□ -1.93
NIPBL-205ENST00000505998 SOSTDC1Q6X4U4 206 aa3.01□□□□□ -1.93
NIPBL-205ENST00000505998 LINC00337Q8N6G1 96 aa3.01□□□□□ -1.93
NIPBL-205ENST00000505998 PKHD1P08F94 4074 aa3.01□□□□□ -1.93
NIPBL-205ENST00000505998 DNAH5Q8TE73 4624 aa3□□□□□ -1.93
NIPBL-205ENST00000505998 NBDYA0A0U1RRE5 68 aa3□□□□□ -1.93
NIPBL-205ENST00000505998 FAM229BQ4G0N7 80 aa3□□□□□ -1.93
NIPBL-205ENST00000505998 LINC00269Q8N2A0 174 aa3□□□□□ -1.93
NIPBL-205ENST00000505998 ST20-AS1Q8NBB2 130 aa3□□□□□ -1.93
NIPBL-205ENST00000505998 CLEC2BQ92478 149 aa3□□□□□ -1.93
NIPBL-205ENST00000505998 AMELXQ99217 191 aa3□□□□□ -1.93
NIPBL-205ENST00000505998 CDC42SE2Q9NRR3 84 aa3□□□□□ -1.93
NIPBL-205ENST00000505998 IGKV3D-7A0A0C4DH55 119 aa2.99□□□□□ -1.93
NIPBL-205ENST00000505998 MIAQ16674 131 aa2.99□□□□□ -1.93
NIPBL-205ENST00000505998 TMEM141Q96I45 108 aa2.99□□□□□ -1.93
NIPBL-205ENST00000505998 CYP4F30PQ9H0H9 118 aa2.99□□□□□ -1.93
NIPBL-205ENST00000505998 DNAH8Q96JB1 4490 aa2.98□□□□□ -1.93
NIPBL-205ENST00000505998 A0A087WVE0 104 aa2.98□□□□□ -1.93
NIPBL-205ENST00000505998 RPL39P62891 51 aaKnown RBP2.98□□□□□ -1.93
NIPBL-205ENST00000505998 ASB16-AS1Q495Z4 193 aa2.98□□□□□ -1.93
NIPBL-205ENST00000505998 ENHOQ6UWT2 76 aa2.98□□□□□ -1.93
Retrieved 100 of 20,778 RNA–protein pairs in 43.5 ms