RNA–Protein interactions for RNA: ENST00000497080.1

RAB3GAP1-206, Transcript of RAB3 GTPase activating protein catalytic subunit 1, humanhuman

TSL 5

Gene RAB3GAP1, Length 446 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB3GAP1-206ENST00000497080 BRCA2P51587 3418 aa1.66□□□□□ -2.14
RAB3GAP1-206ENST00000497080 SPART-AS1P0CW21 52 aa1.66□□□□□ -2.14
RAB3GAP1-206ENST00000497080 KRTAP26-1Q6PEX3 210 aa1.66□□□□□ -2.14
RAB3GAP1-206ENST00000497080 SSBP3-AS1Q7Z2R9 100 aa1.66□□□□□ -2.14
RAB3GAP1-206ENST00000497080 WNK1Q9H4A3 2382 aa1.66□□□□□ -2.14
RAB3GAP1-206ENST00000497080 WDR87Q6ZQQ6 2873 aa1.66□□□□□ -2.14
RAB3GAP1-206ENST00000497080 CEP250Q9BV73 2442 aa1.66□□□□□ -2.14
RAB3GAP1-206ENST00000497080 A0A1W2PNN7 141 aa1.65□□□□□ -2.15
RAB3GAP1-206ENST00000497080 DEFB136Q30KP8 78 aa1.65□□□□□ -2.15
RAB3GAP1-206ENST00000497080 COX6B2Q6YFQ2 88 aa1.65□□□□□ -2.15
RAB3GAP1-206ENST00000497080 CIRBP-AS1Q8TBR5 109 aa1.65□□□□□ -2.15
RAB3GAP1-206ENST00000497080 FCGBPQ9Y6R7 5405 aaPredicted RBP1.65□□□□□ -2.15
RAB3GAP1-206ENST00000497080 SDK1Q7Z5N4 2213 aa1.64□□□□□ -2.15
RAB3GAP1-206ENST00000497080 A0A096LPF7 62 aa1.64□□□□□ -2.15
RAB3GAP1-206ENST00000497080 TPRP12270 2363 aaKnown RBP1.64□□□□□ -2.15
RAB3GAP1-206ENST00000497080 PKDREJQ9NTG1 2253 aa1.64□□□□□ -2.15
RAB3GAP1-206ENST00000497080 KMT2BQ9UMN6 2715 aaPredicted RBP1.63□□□□□ -2.15
RAB3GAP1-206ENST00000497080 SPTBN2O15020 2390 aa1.63□□□□□ -2.15
RAB3GAP1-206ENST00000497080 A0A087WTM6 91 aa1.63□□□□□ -2.15
RAB3GAP1-206ENST00000497080 A0A1B0GU33 70 aa1.63□□□□□ -2.15
RAB3GAP1-206ENST00000497080 LINC01556Q5JQF7 62 aa1.63□□□□□ -2.15
RAB3GAP1-206ENST00000497080 DEFB124Q8NES8 71 aa1.63□□□□□ -2.15
RAB3GAP1-206ENST00000497080 CRIPTQ9P021 101 aa1.63□□□□□ -2.15
RAB3GAP1-206ENST00000497080 C5orf42Q9H799 3197 aa1.62□□□□□ -2.15
RAB3GAP1-206ENST00000497080 C10orf99Q6UWK7 81 aa1.62□□□□□ -2.15
RAB3GAP1-206ENST00000497080 MKI67P46013 3256 aaKnown RBP1.62□□□□□ -2.15
RAB3GAP1-206ENST00000497080 UNC80Q8N2C7 3258 aa1.62□□□□□ -2.15
RAB3GAP1-206ENST00000497080 ZFHX3Q15911 3703 aa1.61□□□□□ -2.15
RAB3GAP1-206ENST00000497080 HTN3P15516 51 aa1.61□□□□□ -2.15
RAB3GAP1-206ENST00000497080 KRTAP13-4Q3LI77 160 aa1.61□□□□□ -2.15
RAB3GAP1-206ENST00000497080 H1FX-AS1Q4G0G2 97 aa1.61□□□□□ -2.15
RAB3GAP1-206ENST00000497080 Q96NJ1 140 aa1.61□□□□□ -2.15
RAB3GAP1-206ENST00000497080 DNAH14Q0VDD8 3507 aa1.61□□□□□ -2.15
RAB3GAP1-206ENST00000497080 ROS1P08922 2347 aa1.6□□□□□ -2.15
RAB3GAP1-206ENST00000497080 PRLHP81277 87 aa1.6□□□□□ -2.15
RAB3GAP1-206ENST00000497080 PSORS1C2Q9UIG4 136 aa1.6□□□□□ -2.15
RAB3GAP1-206ENST00000497080 LAMA3Q16787 3333 aa1.6□□□□□ -2.15
RAB3GAP1-206ENST00000497080 SZT2Q5T011 3432 aa1.6□□□□□ -2.15
RAB3GAP1-206ENST00000497080 RP1L1Q8IWN7 2480 aaPredicted RBP1.6□□□□□ -2.15
RAB3GAP1-206ENST00000497080 REV3LO60673 3130 aa1.6□□□□□ -2.15
RAB3GAP1-206ENST00000497080 CUL9Q8IWT3 2517 aa1.59□□□□□ -2.15
RAB3GAP1-206ENST00000497080 APC2O95996 2303 aa1.59□□□□□ -2.15
RAB3GAP1-206ENST00000497080 A0A0G2JQZ4 141 aa1.59□□□□□ -2.15
RAB3GAP1-206ENST00000497080 NBDYA0A0U1RRE5 68 aa1.59□□□□□ -2.15
RAB3GAP1-206ENST00000497080 ANKHD1Q8IWZ3 2542 aaKnown RBP1.58□□□□□ -2.16
RAB3GAP1-206ENST00000497080 COL6A6A6NMZ7 2263 aa1.58□□□□□ -2.16
RAB3GAP1-206ENST00000497080 H0YAA0 97 aa1.58□□□□□ -2.16
RAB3GAP1-206ENST00000497080 RPL37P61927 97 aaKnown RBP1.58□□□□□ -2.16
RAB3GAP1-206ENST00000497080 CNOT1A5YKK6 2376 aaKnown RBP1.58□□□□□ -2.16
RAB3GAP1-206ENST00000497080 CREBBPQ92793 2442 aa1.58□□□□□ -2.16
RAB3GAP1-206ENST00000497080 VCANP13611 3396 aa1.58□□□□□ -2.16
RAB3GAP1-206ENST00000497080 PCNX1Q96RV3 2341 aa1.57□□□□□ -2.16
RAB3GAP1-206ENST00000497080 XIRP2A4UGR9 3374 aa1.57□□□□□ -2.16
RAB3GAP1-206ENST00000497080 LAMA2P24043 3122 aaKnown RBP1.57□□□□□ -2.16
RAB3GAP1-206ENST00000497080 DEFB135Q30KP9 77 aa1.57□□□□□ -2.16
RAB3GAP1-206ENST00000497080 Q6ZSA8 131 aa1.57□□□□□ -2.16
RAB3GAP1-206ENST00000497080 DEFB123Q8N688 67 aa1.57□□□□□ -2.16
RAB3GAP1-206ENST00000497080 SPEGQ15772 3267 aa1.57□□□□□ -2.16
RAB3GAP1-206ENST00000497080 AKAP6Q13023 2319 aa1.57□□□□□ -2.16
RAB3GAP1-206ENST00000497080 EP300Q09472 2414 aaPredicted RBP1.57□□□□□ -2.16
RAB3GAP1-206ENST00000497080 C2CD3Q4AC94 2353 aa1.56□□□□□ -2.16
RAB3GAP1-206ENST00000497080 A0A096LNI7 61 aa1.56□□□□□ -2.16
RAB3GAP1-206ENST00000497080 PTPRZ1P23471 2315 aaPredicted RBP1.56□□□□□ -2.16
RAB3GAP1-206ENST00000497080 CACNA1HO95180 2353 aa1.56□□□□□ -2.16
RAB3GAP1-206ENST00000497080 CDH23Q9H251 3354 aa1.55□□□□□ -2.16
RAB3GAP1-206ENST00000497080 SPINK1P00995 79 aa1.55□□□□□ -2.16
RAB3GAP1-206ENST00000497080 SPINK6Q6UWN8 80 aa1.55□□□□□ -2.16
RAB3GAP1-206ENST00000497080 TRANK1O15050 2925 aa1.55□□□□□ -2.16
RAB3GAP1-206ENST00000497080 ACACAQ13085 2346 aa1.54□□□□□ -2.16
RAB3GAP1-206ENST00000497080 K7EIL1 84 aa1.54□□□□□ -2.16
RAB3GAP1-206ENST00000497080 PLAC4Q8WY50 150 aa1.54□□□□□ -2.16
RAB3GAP1-206ENST00000497080 DEFB4AO15263 64 aa1.53□□□□□ -2.16
RAB3GAP1-206ENST00000497080 RANBP2P49792 3224 aaKnown RBP1.53□□□□□ -2.16
RAB3GAP1-206ENST00000497080 USP34Q70CQ2 3546 aa1.53□□□□□ -2.17
RAB3GAP1-206ENST00000497080 SPTA1P02549 2419 aa1.52□□□□□ -2.17
RAB3GAP1-206ENST00000497080 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP1.52□□□□□ -2.176e-7■■■□□ 15.2
RAB3GAP1-206ENST00000497080 ALMS1Q8TCU4 4167 aa1.52□□□□□ -2.17
RAB3GAP1-206ENST00000497080 J3QKU1 62 aa1.52□□□□□ -2.17
RAB3GAP1-206ENST00000497080 TPRXLQ17RH7 258 aa1.52□□□□□ -2.17
RAB3GAP1-206ENST00000497080 UBE2DNLQ8IWF7 75 aa1.51□□□□□ -2.17
RAB3GAP1-206ENST00000497080 PRO2289Q9P1D8 64 aa1.51□□□□□ -2.17
RAB3GAP1-206ENST00000497080 LAMA1P25391 3075 aa1.51□□□□□ -2.17
RAB3GAP1-206ENST00000497080 FRYLO94915 3013 aa1.51□□□□□ -2.17
RAB3GAP1-206ENST00000497080 TENM1Q9UKZ4 2725 aa1.51□□□□□ -2.17
RAB3GAP1-206ENST00000497080 SPTBN5Q9NRC6 3674 aaKnown RBP1.51□□□□□ -2.17
RAB3GAP1-206ENST00000497080 SPTAN1Q13813 2472 aaKnown RBP1.5□□□□□ -2.17
RAB3GAP1-206ENST00000497080 NCOR1O75376 2440 aa1.5□□□□□ -2.17
RAB3GAP1-206ENST00000497080 FREM2Q5SZK8 3169 aa1.5□□□□□ -2.17
RAB3GAP1-206ENST00000497080 CFAP54Q96N23 3096 aa1.5□□□□□ -2.17
RAB3GAP1-206ENST00000497080 ANKRD17O75179 2603 aaKnown RBP1.5□□□□□ -2.17
RAB3GAP1-206ENST00000497080 COL6A3P12111 3177 aa1.5□□□□□ -2.17
RAB3GAP1-206ENST00000497080 ZZEF1O43149 2961 aa1.5□□□□□ -2.17
RAB3GAP1-206ENST00000497080 TRIOO75962 3097 aa1.49□□□□□ -2.17
RAB3GAP1-206ENST00000497080 TNRC18O15417 2968 aaPredicted RBP1.49□□□□□ -2.17
RAB3GAP1-206ENST00000497080 EYSQ5T1H1 3165 aa1.49□□□□□ -2.17
RAB3GAP1-206ENST00000497080 CEP290O15078 2479 aa1.48□□□□□ -2.17
RAB3GAP1-206ENST00000497080 NBEAQ8NFP9 2946 aa1.48□□□□□ -2.17
RAB3GAP1-206ENST00000497080 ZDBF2Q9HCK1 2354 aa1.48□□□□□ -2.17
RAB3GAP1-206ENST00000497080 CSPG4Q6UVK1 2322 aa1.48□□□□□ -2.17
RAB3GAP1-206ENST00000497080 INE1O15225 51 aa1.48□□□□□ -2.17
Retrieved 100 of 20,778 RNA–protein pairs in 60.7 ms