RNA–Protein interactions for RNA: ENST00000495799.5

PPP1R3F-205, Transcript of protein phosphatase 1 regulatory subunit 3F, humanhuman

TSL 1 (best) BASIC

Gene PPP1R3F, Length 1,537 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP1R3F-205ENST00000495799 ACYP1P07311 99 aa14.81□□□□□ -0.04
PPP1R3F-205ENST00000495799 SMIM29Q86T20 159 aa14.81□□□□□ -0.04
PPP1R3F-205ENST00000495799 RYR3Q15413 4870 aa14.8□□□□□ -0.04
PPP1R3F-205ENST00000495799 TRBV7-4A0A0J9YYF1 115 aa14.8□□□□□ -0.04
PPP1R3F-205ENST00000495799 CCKP06307 115 aa14.8□□□□□ -0.04
PPP1R3F-205ENST00000495799 RPL37AP61513 92 aaKnown RBP14.79□□□□□ -0.04
PPP1R3F-205ENST00000495799 LINC00483Q53H64 154 aa14.78□□□□□ -0.04
PPP1R3F-205ENST00000495799 Q6ZQT0 140 aa14.78□□□□□ -0.04
PPP1R3F-205ENST00000495799 IGLV8-61A0A075B6I0 122 aa14.73□□□□□ -0.05
PPP1R3F-205ENST00000495799 SMR3BP02814 79 aaPredicted RBP14.69□□□□□ -0.06
PPP1R3F-205ENST00000495799 Q6JHZ5 121 aa14.69□□□□□ -0.06
PPP1R3F-205ENST00000495799 CDK2AP2O75956 126 aa14.68□□□□□ -0.06
PPP1R3F-205ENST00000495799 VPS25Q9BRG1 176 aa14.68□□□□□ -0.06
PPP1R3F-205ENST00000495799 APOBP04114 4563 aaKnown RBP14.67□□□□□ -0.06
PPP1R3F-205ENST00000495799 SPINK6Q6UWN8 80 aa14.65□□□□□ -0.06
PPP1R3F-205ENST00000495799 A0A1B0GW54 56 aa14.63□□□□□ -0.07
PPP1R3F-205ENST00000495799 C9orf153Q5TBE3 101 aa14.62□□□□□ -0.07
PPP1R3F-205ENST00000495799 IGFL1Q6UW32 110 aa14.62□□□□□ -0.07
PPP1R3F-205ENST00000495799 IGLV9-49A0A0B4J1Y8 123 aa14.61□□□□□ -0.07
PPP1R3F-205ENST00000495799 Q8NBF4 154 aa14.61□□□□□ -0.07
PPP1R3F-205ENST00000495799 CDIP1Q9H305 208 aa14.61□□□□□ -0.07
PPP1R3F-205ENST00000495799 FAM229AH3BQW9 127 aa14.59□□□□□ -0.07
PPP1R3F-205ENST00000495799 PLA2G1BP04054 148 aaKnown RBP14.58□□□□□ -0.08
PPP1R3F-205ENST00000495799 FAM229BQ4G0N7 80 aa14.58□□□□□ -0.08
PPP1R3F-205ENST00000495799 LINC00846Q9NV44 126 aa14.57□□□□□ -0.08
PPP1R3F-205ENST00000495799 A0A1W2PNM2 257 aa14.56□□□□□ -0.08
PPP1R3F-205ENST00000495799 ANAPC11Q9NYG5 84 aa14.56□□□□□ -0.08
PPP1R3F-205ENST00000495799 UBL5Q9BZL1 73 aa14.56□□□□□ -0.08
PPP1R3F-205ENST00000495799 MOBPQ13875 183 aa14.55□□□□□ -0.08
PPP1R3F-205ENST00000495799 VPS13BQ7Z7G8 4022 aa14.54□□□□□ -0.08
PPP1R3F-205ENST00000495799 CRYGAP11844 174 aa14.52□□□□□ -0.08
PPP1R3F-205ENST00000495799 SRRM2Q9UQ35 2752 aaKnown RBP14.52□□□□□ -0.08
PPP1R3F-205ENST00000495799 KRTAP10-4P60372 401 aaPredicted RBP14.51□□□□□ -0.09
PPP1R3F-205ENST00000495799 Q6Q795 121 aa14.51□□□□□ -0.09
PPP1R3F-205ENST00000495799 LINC00643Q86TS7 51 aa14.51□□□□□ -0.09
PPP1R3F-205ENST00000495799 KRTAP1-4P0C5Y4 121 aa14.49□□□□□ -0.09
PPP1R3F-205ENST00000495799 SSBP3-AS1Q7Z2R9 100 aa14.48□□□□□ -0.09
PPP1R3F-205ENST00000495799 A0A0G2JQZ4 141 aa14.46□□□□□ -0.09
PPP1R3F-205ENST00000495799 Q6ZVQ6 151 aa14.44□□□□□ -0.1
PPP1R3F-205ENST00000495799 SIGMAR1Q99720 223 aa14.44□□□□□ -0.1
PPP1R3F-205ENST00000495799 Q5VSD8 79 aa14.43□□□□□ -0.1
PPP1R3F-205ENST00000495799 A0A087X002 238 aa14.42□□□□□ -0.1
PPP1R3F-205ENST00000495799 TRBV7-7A0A0K0K1E9 115 aa14.42□□□□□ -0.1
PPP1R3F-205ENST00000495799 NREPQ16612 68 aa14.42□□□□□ -0.1
PPP1R3F-205ENST00000495799 ATP5EP2Q5VTU8 51 aa14.41□□□□□ -0.1
PPP1R3F-205ENST00000495799 A0A087WSZ3 146 aa14.39□□□□□ -0.11
PPP1R3F-205ENST00000495799 CD164Q04900 197 aa14.38□□□□□ -0.11
PPP1R3F-205ENST00000495799 KRTAP13-2Q52LG2 175 aa14.38□□□□□ -0.11
PPP1R3F-205ENST00000495799 MT-ATP8P03928 68 aa14.37□□□□□ -0.11
PPP1R3F-205ENST00000495799 FAT1Q14517 4588 aa14.37□□□□□ -0.11
PPP1R3F-205ENST00000495799 SS18L2Q9UHA2 77 aa14.34□□□□□ -0.11
PPP1R3F-205ENST00000495799 HSPG2P98160 4391 aa14.34□□□□□ -0.11
PPP1R3F-205ENST00000495799 TYMSOSQ8TAI1 123 aa14.33□□□□□ -0.12
PPP1R3F-205ENST00000495799 HRCT1Q6UXD1 115 aa14.32□□□□□ -0.12
PPP1R3F-205ENST00000495799 Q8N1X5 172 aa14.31□□□□□ -0.12
PPP1R3F-205ENST00000495799 RYR1P21817 5038 aa14.31□□□□□ -0.12
PPP1R3F-205ENST00000495799 CXCL6P80162 114 aa14.31□□□□□ -0.12
PPP1R3F-205ENST00000495799 IGKV3D-7A0A0C4DH55 119 aa14.29□□□□□ -0.12
PPP1R3F-205ENST00000495799 IMUPQ9GZP8 106 aa14.29□□□□□ -0.12
PPP1R3F-205ENST00000495799 BPY2O14599 106 aa14.27□□□□□ -0.12
PPP1R3F-205ENST00000495799 PRR26Q8N8Z3 221 aa14.26□□□□□ -0.13
PPP1R3F-205ENST00000495799 EPPK1P58107 5090 aaKnown RBP14.25□□□□□ -0.13
PPP1R3F-205ENST00000495799 C4orf48Q5BLP8 95 aa14.25□□□□□ -0.13
PPP1R3F-205ENST00000495799 PKHD1L1Q86WI1 4243 aa14.24□□□□□ -0.13
PPP1R3F-205ENST00000495799 SPAG11AQ6PDA7 123 aa14.18□□□□□ -0.14
PPP1R3F-205ENST00000495799 LIMD2Q9BT23 127 aa14.18□□□□□ -0.14
PPP1R3F-205ENST00000495799 LINC00472Q9H8W2 130 aa14.17□□□□□ -0.14
PPP1R3F-205ENST00000495799 J3KT08 172 aa14.16□□□□□ -0.14
PPP1R3F-205ENST00000495799 SPINK1P00995 79 aa14.16□□□□□ -0.14
PPP1R3F-205ENST00000495799 HIST1H4AP62805 103 aaKnown RBP14.16□□□□□ -0.14
PPP1R3F-205ENST00000495799 LINC00304Q8N9R0 145 aa14.16□□□□□ -0.14
PPP1R3F-205ENST00000495799 Q5XG85 94 aa14.15□□□□□ -0.14
PPP1R3F-205ENST00000495799 ASB16-AS1Q495Z4 193 aa14.15□□□□□ -0.14
PPP1R3F-205ENST00000495799 KIAA1109Q2LD37 5005 aa14.12□□□□□ -0.15
PPP1R3F-205ENST00000495799 SCGB1A1P11684 91 aa14.12□□□□□ -0.15
PPP1R3F-205ENST00000495799 RPS29P62273 56 aaKnown RBP14.11□□□□□ -0.15
PPP1R3F-205ENST00000495799 KRTAP17-1Q9BYP8 105 aa14.1□□□□□ -0.15
PPP1R3F-205ENST00000495799 DEFB116Q30KQ4 102 aa14.1□□□□□ -0.15
PPP1R3F-205ENST00000495799 DSCR10P59022 87 aa14.08□□□□□ -0.16
PPP1R3F-205ENST00000495799 Q96NJ1 140 aa14.08□□□□□ -0.16
PPP1R3F-205ENST00000495799 IGKV4-1P06312 121 aa14.06□□□□□ -0.16
PPP1R3F-205ENST00000495799 A8MWP4 228 aa14.04□□□□□ -0.16
PPP1R3F-205ENST00000495799 A0A087WVE0 104 aa14.03□□□□□ -0.16
PPP1R3F-205ENST00000495799 NDUFB1O75438 58 aa14.03□□□□□ -0.16
PPP1R3F-205ENST00000495799 Q8N9L7 120 aa14.02□□□□□ -0.16
PPP1R3F-205ENST00000495799 K7EQZ3 153 aa14.01□□□□□ -0.17
PPP1R3F-205ENST00000495799 KRTAP10-8P60410 259 aa14□□□□□ -0.17
PPP1R3F-205ENST00000495799 FAM236AA0A1B0GUQ0 79 aa13.99□□□□□ -0.17
PPP1R3F-205ENST00000495799 FAM236BA0A1B0GV22 79 aa13.99□□□□□ -0.17
PPP1R3F-205ENST00000495799 PRR15Q8IV56 129 aa13.97□□□□□ -0.17
PPP1R3F-205ENST00000495799 C1orf195Q5TG92 126 aa13.95□□□□□ -0.18
PPP1R3F-205ENST00000495799 OXTP01178 125 aa13.91□□□□□ -0.18
PPP1R3F-205ENST00000495799 BIRC6Q9NR09 4857 aa13.9□□□□□ -0.18
PPP1R3F-205ENST00000495799 A0A1B0GVX0 72 aa13.9□□□□□ -0.19
PPP1R3F-205ENST00000495799 HCG22E2RYF7 251 aa13.88□□□□□ -0.19
PPP1R3F-205ENST00000495799 ATOX1O00244 68 aa13.87□□□□□ -0.19
PPP1R3F-205ENST00000495799 FAT3Q8TDW7 4589 aa13.84□□□□□ -0.19
PPP1R3F-205ENST00000495799 IGHV6-1A0A0B4J1U7 121 aa13.84□□□□□ -0.19
PPP1R3F-205ENST00000495799 KRTAP4-5Q9BYR2 181 aa13.83□□□□□ -0.2
PPP1R3F-205ENST00000495799 C8orf87E5RJ46 101 aa13.81□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 46.6 ms