RNA–Protein interactions for RNA: ENST00000495705.5

LMO4-204, Transcript of LIM domain only 4, humanhuman

TSL 3

Gene LMO4, Length 565 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMO4-204ENST00000495705 PPDPFLQ8WWR9 84 aa11.53□□□□□ -0.56
LMO4-204ENST00000495705 PSMB2P49721 201 aa11.52□□□□□ -0.57
LMO4-204ENST00000495705 RPS29P62273 56 aaKnown RBP11.52□□□□□ -0.57
LMO4-204ENST00000495705 COX6CP09669 75 aa11.51□□□□□ -0.57
LMO4-204ENST00000495705 PRR4Q16378 134 aa11.51□□□□□ -0.57
LMO4-204ENST00000495705 OCIAD2Q56VL3 154 aa11.51□□□□□ -0.57
LMO4-204ENST00000495705 FAM218AQ96MZ4 157 aa11.51□□□□□ -0.57
LMO4-204ENST00000495705 F8WEM9 126 aa11.5□□□□□ -0.57
LMO4-204ENST00000495705 GHRHP01286 108 aa11.47□□□□□ -0.57
LMO4-204ENST00000495705 RETNLBQ9BQ08 111 aa11.46□□□□□ -0.57
LMO4-204ENST00000495705 CLEC2BQ92478 149 aa11.45□□□□□ -0.58
LMO4-204ENST00000495705 CD164Q04900 197 aa11.44□□□□□ -0.58
LMO4-204ENST00000495705 SNHG12Q9BXW3 62 aa11.44□□□□□ -0.58
LMO4-204ENST00000495705 DNAL4O96015 105 aa11.42□□□□□ -0.58
LMO4-204ENST00000495705 IGLV8-61A0A075B6I0 122 aa11.41□□□□□ -0.58
LMO4-204ENST00000495705 Q6JHZ5 121 aa11.41□□□□□ -0.58
LMO4-204ENST00000495705 LIMD2Q9BT23 127 aa11.41□□□□□ -0.58
LMO4-204ENST00000495705 SCGB1C2P0DMR2 95 aa11.4□□□□□ -0.58
LMO4-204ENST00000495705 LRP2P98164 4655 aa11.4□□□□□ -0.58
LMO4-204ENST00000495705 HRCT1Q6UXD1 115 aa11.4□□□□□ -0.58
LMO4-204ENST00000495705 FP248Q71RG6 208 aaPredicted RBP11.39□□□□□ -0.59
LMO4-204ENST00000495705 H3BQ85 93 aa11.38□□□□□ -0.59
LMO4-204ENST00000495705 IGLV7-46A0A075B6I9 117 aa11.36□□□□□ -0.59
LMO4-204ENST00000495705 BATFQ16520 125 aa11.36□□□□□ -0.59
LMO4-204ENST00000495705 ORMDL1Q9P0S3 153 aa11.36□□□□□ -0.59
LMO4-204ENST00000495705 LST1O00453 97 aa11.35□□□□□ -0.59
LMO4-204ENST00000495705 TRACP01848 142 aa11.35□□□□□ -0.59
LMO4-204ENST00000495705 FABP2P12104 132 aa11.35□□□□□ -0.59
LMO4-204ENST00000495705 NDUFV3P56181 108 aaKnown RBP11.35□□□□□ -0.59
LMO4-204ENST00000495705 A0A0G2JQZ4 141 aa11.34□□□□□ -0.59
LMO4-204ENST00000495705 UBR4Q5T4S7 5183 aa11.33□□□□□ -0.6
LMO4-204ENST00000495705 IGFL1Q6UW32 110 aa11.33□□□□□ -0.6
LMO4-204ENST00000495705 Q5XG85 94 aa11.32□□□□□ -0.6
LMO4-204ENST00000495705 H3BUT2 72 aa11.31□□□□□ -0.6
LMO4-204ENST00000495705 TPRXLQ17RH7 258 aa11.31□□□□□ -0.6
LMO4-204ENST00000495705 LPAP08519 4548 aa11.31□□□□□ -0.6
LMO4-204ENST00000495705 TMEM256-PLSCR3K7ERE1 68 aa11.3□□□□□ -0.6
LMO4-204ENST00000495705 LYRM7Q5U5X0 104 aa11.29□□□□□ -0.6
LMO4-204ENST00000495705 NAA38Q9BRA0 125 aaKnown RBP11.29□□□□□ -0.6
LMO4-204ENST00000495705 H3BMG7 143 aa11.28□□□□□ -0.6
LMO4-204ENST00000495705 ATXN8Q156A1 80 aa11.26□□□□□ -0.61
LMO4-204ENST00000495705 TRBV7-7A0A0K0K1E9 115 aa11.25□□□□□ -0.61
LMO4-204ENST00000495705 TCL1BO95988 128 aa11.25□□□□□ -0.61
LMO4-204ENST00000495705 UBE2V1Q13404 147 aa11.24□□□□□ -0.61
LMO4-204ENST00000495705 Q6Q795 121 aa11.22□□□□□ -0.61
LMO4-204ENST00000495705 CDIP1Q9H305 208 aa11.22□□□□□ -0.61
LMO4-204ENST00000495705 TEN1Q86WV5 123 aa11.21□□□□□ -0.61
LMO4-204ENST00000495705 TRBV20-1A0A075B6N2 111 aa11.2□□□□□ -0.62
LMO4-204ENST00000495705 C9orf118A6NHY6 69 aa11.2□□□□□ -0.62
LMO4-204ENST00000495705 KRTAP13-3Q3SY46 172 aa11.2□□□□□ -0.62
LMO4-204ENST00000495705 TAX1BP3O14907 124 aa11.19□□□□□ -0.62
LMO4-204ENST00000495705 BAALC-AS2P0C853 105 aa11.18□□□□□ -0.62
LMO4-204ENST00000495705 ASB16-AS1Q495Z4 193 aa11.18□□□□□ -0.62
LMO4-204ENST00000495705 C1orf195Q5TG92 126 aa11.18□□□□□ -0.62
LMO4-204ENST00000495705 ANKRD29Q8N6D5 301 aa11.17□□□□□ -0.62
LMO4-204ENST00000495705 SS18L2Q9UHA2 77 aa11.16□□□□□ -0.62
LMO4-204ENST00000495705 A0A1B0GV72 72 aa11.15□□□□□ -0.62
LMO4-204ENST00000495705 A0A1W2PPM0 123 aa11.14□□□□□ -0.63
LMO4-204ENST00000495705 RBM3P98179 157 aaKnown RBP11.12□□□□□ -0.63
LMO4-204ENST00000495705 A0A1W2PNM2 257 aa11.11□□□□□ -0.63
LMO4-204ENST00000495705 COL5A1-AS1Q5SY13 56 aa11.11□□□□□ -0.63
LMO4-204ENST00000495705 A0A087WSZ3 146 aa11.1□□□□□ -0.63
LMO4-204ENST00000495705 TRBV7-4A0A0J9YYF1 115 aa11.1□□□□□ -0.63
LMO4-204ENST00000495705 C9JAW5 83 aa11.08□□□□□ -0.64
LMO4-204ENST00000495705 DSCR8Q96T75 97 aa11.08□□□□□ -0.64
LMO4-204ENST00000495705 PCP4L1A6NKN8 68 aa11.07□□□□□ -0.64
LMO4-204ENST00000495705 CCKP06307 115 aa11.07□□□□□ -0.64
LMO4-204ENST00000495705 JMJD7-PLA2G4BH0Y9G9 81 aa11.06□□□□□ -0.64
LMO4-204ENST00000495705 RNF213Q63HN8 5207 aa11.04□□□□□ -0.64
LMO4-204ENST00000495705 H3BT86 120 aa11.02□□□□□ -0.65
LMO4-204ENST00000495705 SPCS1Q9Y6A9 102 aa11.02□□□□□ -0.65
LMO4-204ENST00000495705 C9orf92A6NGG3 77 aa11.01□□□□□ -0.65
LMO4-204ENST00000495705 XP32Q5T750 250 aa11.01□□□□□ -0.65
LMO4-204ENST00000495705 VPS25Q9BRG1 176 aa11.01□□□□□ -0.65
LMO4-204ENST00000495705 C21orf62-AS1Q17RA5 79 aa10.99□□□□□ -0.65
LMO4-204ENST00000495705 PDE6GP18545 87 aa10.98□□□□□ -0.65
LMO4-204ENST00000495705 LOC110117498A0A087WWA1 95 aa10.97□□□□□ -0.65
LMO4-204ENST00000495705 OBSCN-AS1Q96MR7 158 aa10.96□□□□□ -0.65
LMO4-204ENST00000495705 Q96NJ1 140 aa10.96□□□□□ -0.65
LMO4-204ENST00000495705 MUC17Q685J3 4493 aa10.96□□□□□ -0.66
LMO4-204ENST00000495705 SEC61BP60468 96 aaKnown RBP10.95□□□□□ -0.66
LMO4-204ENST00000495705 Q6ZQT0 140 aa10.95□□□□□ -0.66
LMO4-204ENST00000495705 MTURNQ8N3F0 131 aa10.94□□□□□ -0.66
LMO4-204ENST00000495705 C14orf132Q9NPU4 83 aa10.93□□□□□ -0.66
LMO4-204ENST00000495705 A0A1B0GW54 56 aa10.92□□□□□ -0.66
LMO4-204ENST00000495705 K7EP34 96 aa10.91□□□□□ -0.66
LMO4-204ENST00000495705 SIGMAR1Q99720 223 aa10.89□□□□□ -0.67
LMO4-204ENST00000495705 LINC00472Q9H8W2 130 aa10.88□□□□□ -0.67
LMO4-204ENST00000495705 IGKV4-1P06312 121 aa10.87□□□□□ -0.67
LMO4-204ENST00000495705 GTF2H5Q6ZYL4 71 aa10.85□□□□□ -0.67
LMO4-204ENST00000495705 MUC2Q02817 5179 aa10.84□□□□□ -0.67
LMO4-204ENST00000495705 SMCPP49901 116 aaPredicted RBP10.82□□□□□ -0.68
LMO4-204ENST00000495705 RPL37P61927 97 aaKnown RBP10.82□□□□□ -0.68
LMO4-204ENST00000495705 DEFB116Q30KQ4 102 aa10.81□□□□□ -0.68
LMO4-204ENST00000495705 PRO0461Q9UI25 63 aa10.81□□□□□ -0.68
LMO4-204ENST00000495705 J3KT08 172 aa10.79□□□□□ -0.68
LMO4-204ENST00000495705 A0A0U1RQV1 116 aa10.77□□□□□ -0.69
LMO4-204ENST00000495705 PCOTHQ58A44 107 aa10.77□□□□□ -0.69
LMO4-204ENST00000495705 DSCR10P59022 87 aa10.75□□□□□ -0.69
LMO4-204ENST00000495705 Q75L30 129 aa10.75□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms