RNA–Protein interactions for RNA: ENST00000487947.6

PDCD10-214, Transcript of programmed cell death 10, humanhuman

TSL 5 BASIC

Gene PDCD10, Length 716 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDCD10-214ENST00000487947 TMEM167BQ9NRX6 74 aa0.72□□□□□ -2.29
PDCD10-214ENST00000487947 C6orf48Q9UBA6 75 aa0.72□□□□□ -2.29
PDCD10-214ENST00000487947 POLQO75417 2590 aa0.72□□□□□ -2.29
PDCD10-214ENST00000487947 SPTBN2O15020 2390 aa0.71□□□□□ -2.3
PDCD10-214ENST00000487947 REV3LO60673 3130 aa0.71□□□□□ -2.3
PDCD10-214ENST00000487947 KIF21BO75037 1637 aa0.71□□□□□ -2.3
PDCD10-214ENST00000487947 FAT2Q9NYQ8 4349 aa0.71□□□□□ -2.3
PDCD10-214ENST00000487947 ATP7AQ04656 1500 aa0.71□□□□□ -2.3
PDCD10-214ENST00000487947 CELSR2Q9HCU4 2923 aa0.71□□□□□ -2.3
PDCD10-214ENST00000487947 ZNF469Q96JG9 3925 aaPredicted RBP0.7□□□□□ -2.3
PDCD10-214ENST00000487947 PRKDCP78527 4128 aaKnown RBP0.7□□□□□ -2.3
PDCD10-214ENST00000487947 SPTBN1Q01082 2364 aaKnown RBP0.69□□□□□ -2.3
PDCD10-214ENST00000487947 KRTAP2-3P0C7H8 128 aa0.69□□□□□ -2.3
PDCD10-214ENST00000487947 DEFB109BQ30KR1 87 aa0.69□□□□□ -2.3
PDCD10-214ENST00000487947 KRTAP2-4Q9BYR9 128 aa0.69□□□□□ -2.3
PDCD10-214ENST00000487947 KRTAP2-1Q9BYU5 128 aa0.69□□□□□ -2.3
PDCD10-214ENST00000487947 NOTCH1P46531 2555 aa0.69□□□□□ -2.3
PDCD10-214ENST00000487947 KNL1Q8NG31 2342 aa0.69□□□□□ -2.3
PDCD10-214ENST00000487947 CHD9Q3L8U1 2897 aa0.68□□□□□ -2.3
PDCD10-214ENST00000487947 GVINP1Q7Z2Y8 2422 aa0.68□□□□□ -2.3
PDCD10-214ENST00000487947 F8P00451 2351 aa0.67□□□□□ -2.3
PDCD10-214ENST00000487947 KRTAP19-3Q7Z4W3 81 aa0.67□□□□□ -2.3
PDCD10-214ENST00000487947 AHNAKQ09666 5890 aaKnown RBP0.66□□□□□ -2.3
PDCD10-214ENST00000487947 WT1-ASQ06250 92 aa0.66□□□□□ -2.3
PDCD10-214ENST00000487947 PKDREJQ9NTG1 2253 aa0.66□□□□□ -2.3
PDCD10-214ENST00000487947 SMR3AQ99954 134 aa0.65□□□□□ -2.31
PDCD10-214ENST00000487947 FBN2P35556 2912 aa0.65□□□□□ -2.31
PDCD10-214ENST00000487947 SAMD9LQ8IVG5 1584 aa0.65□□□□□ -2.31
PDCD10-214ENST00000487947 LYSTQ99698 3801 aa0.64□□□□□ -2.31
PDCD10-214ENST00000487947 SMIM2Q9BVW6 85 aa0.64□□□□□ -2.31
PDCD10-214ENST00000487947 S4R3F8 94 aa0.64□□□□□ -2.31
PDCD10-214ENST00000487947 IGF2RP11717 2491 aa0.64□□□□□ -2.31
PDCD10-214ENST00000487947 ABCA12Q86UK0 2595 aa0.64□□□□□ -2.31
PDCD10-214ENST00000487947 SACSQ9NZJ4 4579 aa0.64□□□□□ -2.31
PDCD10-214ENST00000487947 PCNX1Q96RV3 2341 aa0.63□□□□□ -2.31
PDCD10-214ENST00000487947 KAAG1Q9UBP8 84 aa0.63□□□□□ -2.31
PDCD10-214ENST00000487947 DSPP15924 2871 aaKnown RBP0.63□□□□□ -2.31
PDCD10-214ENST00000487947 MYCBP2O75592 4640 aa0.63□□□□□ -2.31
PDCD10-214ENST00000487947 WNK2Q9Y3S1 2297 aa0.63□□□□□ -2.31
PDCD10-214ENST00000487947 HUWE1Q7Z6Z7 4374 aaKnown RBP0.62□□□□□ -2.31
PDCD10-214ENST00000487947 DNAH11Q96DT5 4516 aa0.62□□□□□ -2.31
PDCD10-214ENST00000487947 SPINK6Q6UWN8 80 aa0.62□□□□□ -2.31
PDCD10-214ENST00000487947 WFDC10BQ8IUB3 73 aa0.62□□□□□ -2.31
PDCD10-214ENST00000487947 DEFB106AQ8N104 65 aa0.62□□□□□ -2.31
PDCD10-214ENST00000487947 CELSR1Q9NYQ6 3014 aa0.62□□□□□ -2.31
PDCD10-214ENST00000487947 VWFP04275 2813 aa0.62□□□□□ -2.31
PDCD10-214ENST00000487947 BDP1A6H8Y1 2624 aa0.61□□□□□ -2.31
PDCD10-214ENST00000487947 PRLHP81277 87 aa0.61□□□□□ -2.31
PDCD10-214ENST00000487947 TNXBP22105 4242 aa0.61□□□□□ -2.31
PDCD10-214ENST00000487947 NCOR1O75376 2440 aa0.6□□□□□ -2.31
PDCD10-214ENST00000487947 PDE4DIPQ5VU43 2346 aa0.6□□□□□ -2.31
PDCD10-214ENST00000487947 TENM4Q6N022 2769 aa0.6□□□□□ -2.31
PDCD10-214ENST00000487947 CLTCL1P53675 1640 aa0.6□□□□□ -2.31
PDCD10-214ENST00000487947 VPS13BQ7Z7G8 4022 aa0.6□□□□□ -2.31
PDCD10-214ENST00000487947 TRANK1O15050 2925 aa0.59□□□□□ -2.31
PDCD10-214ENST00000487947 NDUFA1O15239 70 aa0.59□□□□□ -2.31
PDCD10-214ENST00000487947 ABCA2Q9BZC7 2435 aa0.58□□□□□ -2.32
PDCD10-214ENST00000487947 DUOX1Q9NRD9 1551 aa0.58□□□□□ -2.32
PDCD10-214ENST00000487947 AKAP6Q13023 2319 aa0.58□□□□□ -2.32
PDCD10-214ENST00000487947 PIEZO1Q92508 2521 aa0.58□□□□□ -2.32
PDCD10-214ENST00000487947 CHD6Q8TD26 2715 aa0.58□□□□□ -2.32
PDCD10-214ENST00000487947 TPRP12270 2363 aaKnown RBP0.57□□□□□ -2.32
PDCD10-214ENST00000487947 CSPG4Q6UVK1 2322 aa0.57□□□□□ -2.32
PDCD10-214ENST00000487947 PRM1P04553 51 aa0.57□□□□□ -2.32
PDCD10-214ENST00000487947 APCP25054 2843 aa0.57□□□□□ -2.32
PDCD10-214ENST00000487947 ATRQ13535 2644 aa0.57□□□□□ -2.32
PDCD10-214ENST00000487947 MUC5BQ9HC84 5762 aaPredicted RBP0.57□□□□□ -2.32
PDCD10-214ENST00000487947 GPR98Q8WXG9 6306 aa0.57□□□□□ -2.32
PDCD10-214ENST00000487947 LRP1Q07954 4544 aaKnown RBP0.57□□□□□ -2.32
PDCD10-214ENST00000487947 MMP24-AS1A0A0U1RRL7 71 aa0.56□□□□□ -2.32
PDCD10-214ENST00000487947 SNRPGP62308 76 aaKnown RBP0.56□□□□□ -2.32
PDCD10-214ENST00000487947 OTOGQ6ZRI0 2925 aa0.56□□□□□ -2.32
PDCD10-214ENST00000487947 VPS13DQ5THJ4 4388 aa0.56□□□□□ -2.32
PDCD10-214ENST00000487947 KMT2AQ03164 3969 aa0.55□□□□□ -2.32
PDCD10-214ENST00000487947 MROH2BQ7Z745 1585 aa0.55□□□□□ -2.32
PDCD10-214ENST00000487947 H3BUA1 57 aa0.55□□□□□ -2.32
PDCD10-214ENST00000487947 DEFB135Q30KP9 77 aa0.55□□□□□ -2.32
PDCD10-214ENST00000487947 PRRC2CQ9Y520 2896 aaKnown RBP0.55□□□□□ -2.32
PDCD10-214ENST00000487947 AKAP13Q12802 2813 aa0.54□□□□□ -2.32
PDCD10-214ENST00000487947 M0R2T5 61 aa0.54□□□□□ -2.32
PDCD10-214ENST00000487947 SPINK1P00995 79 aa0.54□□□□□ -2.32
PDCD10-214ENST00000487947 GCC2Q8IWJ2 1684 aa0.53□□□□□ -2.32
PDCD10-214ENST00000487947 LPAP08519 4548 aa0.53□□□□□ -2.32
PDCD10-214ENST00000487947 IGLV5-48A0A075B6I7 105 aa0.53□□□□□ -2.32
PDCD10-214ENST00000487947 U3KQA8 63 aa0.53□□□□□ -2.32
PDCD10-214ENST00000487947 SYNE1Q8NF91 8797 aaKnown RBP0.52□□□□□ -2.33
PDCD10-214ENST00000487947 TNRC18O15417 2968 aaPredicted RBP0.52□□□□□ -2.33
PDCD10-214ENST00000487947 EP300Q09472 2414 aaPredicted RBP0.52□□□□□ -2.33
PDCD10-214ENST00000487947 HSPG2P98160 4391 aa0.51□□□□□ -2.33
PDCD10-214ENST00000487947 PKHD1L1Q86WI1 4243 aa0.51□□□□□ -2.33
PDCD10-214ENST00000487947 APOBP04114 4563 aaKnown RBP0.5□□□□□ -2.33
PDCD10-214ENST00000487947 PKD1P98161 4303 aa0.5□□□□□ -2.33
PDCD10-214ENST00000487947 DNAH2Q9P225 4427 aa0.5□□□□□ -2.33
PDCD10-214ENST00000487947 LRP1BQ9NZR2 4599 aa0.5□□□□□ -2.33
PDCD10-214ENST00000487947 DNAH3Q8TD57 4116 aa0.49□□□□□ -2.33
PDCD10-214ENST00000487947 H0YGG7 62 aa0.49□□□□□ -2.33
PDCD10-214ENST00000487947 KRTAP21-1Q3LI58 79 aa0.49□□□□□ -2.33
PDCD10-214ENST00000487947 ANK3Q12955 4377 aaKnown RBP0.49□□□□□ -2.33
PDCD10-214ENST00000487947 SPENQ96T58 3664 aaKnown RBP0.49□□□□□ -2.33
PDCD10-214ENST00000487947 SPTA1P02549 2419 aa0.49□□□□□ -2.33
Retrieved 100 of 20,778 RNA–protein pairs in 48.3 ms