RNA–Protein interactions for RNA: ENST00000483871.6

SRSF6-202, Transcript of serine and arginine rich splicing factor 6, humanhuman

TSL 2

Gene SRSF6, Length 1,680 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRSF6-202ENST00000483871 CRYGAP11844 174 aa8.35□□□□□ -1.07
SRSF6-202ENST00000483871 SPRR1BP22528 89 aa8.35□□□□□ -1.07
SRSF6-202ENST00000483871 KRTAP29-1A8MX34 341 aaPredicted RBP8.34□□□□□ -1.08
SRSF6-202ENST00000483871 OXTP01178 125 aa8.34□□□□□ -1.08
SRSF6-202ENST00000483871 FAM229BQ4G0N7 80 aa8.34□□□□□ -1.08
SRSF6-202ENST00000483871 SMIM29Q86T20 159 aa8.34□□□□□ -1.08
SRSF6-202ENST00000483871 IGLV9-49A0A0B4J1Y8 123 aa8.33□□□□□ -1.08
SRSF6-202ENST00000483871 DNAL4O96015 105 aa8.33□□□□□ -1.08
SRSF6-202ENST00000483871 MT1HL1P0DM35 61 aa8.33□□□□□ -1.08
SRSF6-202ENST00000483871 KRTAP10-8P60410 259 aa8.33□□□□□ -1.08
SRSF6-202ENST00000483871 UBE2V1Q13404 147 aa8.33□□□□□ -1.08
SRSF6-202ENST00000483871 SPCS1Q9Y6A9 102 aa8.33□□□□□ -1.08
SRSF6-202ENST00000483871 TRACP01848 142 aa8.32□□□□□ -1.08
SRSF6-202ENST00000483871 ATXN8Q156A1 80 aa8.32□□□□□ -1.08
SRSF6-202ENST00000483871 TYMSOSQ8TAI1 123 aa8.3□□□□□ -1.08
SRSF6-202ENST00000483871 LAMTOR3Q9UHA4 124 aa8.3□□□□□ -1.08
SRSF6-202ENST00000483871 TRBV20-1A0A075B6N2 111 aa8.29□□□□□ -1.08
SRSF6-202ENST00000483871 K7EP34 96 aa8.29□□□□□ -1.08
SRSF6-202ENST00000483871 MOBPQ13875 183 aa8.29□□□□□ -1.08
SRSF6-202ENST00000483871 OCIAD2Q56VL3 154 aa8.29□□□□□ -1.08
SRSF6-202ENST00000483871 ORMDL1Q9P0S3 153 aa8.29□□□□□ -1.08
SRSF6-202ENST00000483871 H3BMG7 143 aa8.27□□□□□ -1.08
SRSF6-202ENST00000483871 C9orf153Q5TBE3 101 aa8.27□□□□□ -1.08
SRSF6-202ENST00000483871 J3QL48 77 aa8.27□□□□□ -1.09
SRSF6-202ENST00000483871 PPDPFLQ8WWR9 84 aa8.26□□□□□ -1.09
SRSF6-202ENST00000483871 BAALC-AS2P0C853 105 aa8.25□□□□□ -1.09
SRSF6-202ENST00000483871 A0A0G2JQZ4 141 aa8.24□□□□□ -1.09
SRSF6-202ENST00000483871 C9JAW5 83 aa8.24□□□□□ -1.09
SRSF6-202ENST00000483871 TMEM256-PLSCR3K7ERE1 68 aa8.24□□□□□ -1.09
SRSF6-202ENST00000483871 MTURNQ8N3F0 131 aa8.24□□□□□ -1.09
SRSF6-202ENST00000483871 DMBT1Q9UGM3 2413 aaPredicted RBP8.24□□□□□ -1.09
SRSF6-202ENST00000483871 NDUFV3P56181 108 aaKnown RBP8.24□□□□□ -1.09
SRSF6-202ENST00000483871 Q8NBF4 154 aa8.24□□□□□ -1.09
SRSF6-202ENST00000483871 GHRHP01286 108 aa8.23□□□□□ -1.09
SRSF6-202ENST00000483871 SSBP3-AS1Q7Z2R9 100 aa8.23□□□□□ -1.09
SRSF6-202ENST00000483871 A0A1B0GV72 72 aa8.22□□□□□ -1.09
SRSF6-202ENST00000483871 F8WEM9 126 aa8.21□□□□□ -1.09
SRSF6-202ENST00000483871 H3BQ85 93 aa8.2□□□□□ -1.1
SRSF6-202ENST00000483871 LINC00304Q8N9R0 145 aa8.19□□□□□ -1.1
SRSF6-202ENST00000483871 IGLV8-61A0A075B6I0 122 aa8.18□□□□□ -1.1
SRSF6-202ENST00000483871 F8W1H4 67 aa8.18□□□□□ -1.1
SRSF6-202ENST00000483871 ANKRD29Q8N6D5 301 aa8.18□□□□□ -1.1
SRSF6-202ENST00000483871 IGFL1Q6UW32 110 aa8.18□□□□□ -1.1
SRSF6-202ENST00000483871 HRCT1Q6UXD1 115 aa8.18□□□□□ -1.1
SRSF6-202ENST00000483871 HERC1Q15751 4861 aa8.17□□□□□ -1.1
SRSF6-202ENST00000483871 SMCPP49901 116 aaPredicted RBP8.15□□□□□ -1.1
SRSF6-202ENST00000483871 C4orf48Q5BLP8 95 aa8.15□□□□□ -1.1
SRSF6-202ENST00000483871 H3BT86 120 aa8.14□□□□□ -1.11
SRSF6-202ENST00000483871 Q6JHZ5 121 aa8.14□□□□□ -1.11
SRSF6-202ENST00000483871 PRO0461Q9UI25 63 aa8.14□□□□□ -1.11
SRSF6-202ENST00000483871 RBM3P98179 157 aaKnown RBP8.12□□□□□ -1.11
SRSF6-202ENST00000483871 SPAG11AQ6PDA7 123 aa8.12□□□□□ -1.11
SRSF6-202ENST00000483871 SPINK1P00995 79 aa8.11□□□□□ -1.11
SRSF6-202ENST00000483871 TRBV7-4A0A0J9YYF1 115 aa8.08□□□□□ -1.12
SRSF6-202ENST00000483871 A0A1W2PNM2 257 aa8.08□□□□□ -1.12
SRSF6-202ENST00000483871 JMJD7-PLA2G4BH0Y9G9 81 aa8.08□□□□□ -1.12
SRSF6-202ENST00000483871 CD164Q04900 197 aa8.08□□□□□ -1.12
SRSF6-202ENST00000483871 DSCR8Q96T75 97 aa8.08□□□□□ -1.12
SRSF6-202ENST00000483871 OBSCN-AS1Q96MR7 158 aa8.08□□□□□ -1.12
SRSF6-202ENST00000483871 C14orf132Q9NPU4 83 aa8.08□□□□□ -1.12
SRSF6-202ENST00000483871 ETDBQ3ZM63 59 aa8.07□□□□□ -1.12
SRSF6-202ENST00000483871 TEN1Q86WV5 123 aa8.06□□□□□ -1.12
SRSF6-202ENST00000483871 RETNLBQ9BQ08 111 aa8.06□□□□□ -1.12
SRSF6-202ENST00000483871 K7ERU9 68 aa8.05□□□□□ -1.12
SRSF6-202ENST00000483871 TRBV7-7A0A0K0K1E9 115 aa8.05□□□□□ -1.12
SRSF6-202ENST00000483871 J3QR89 54 aa8.05□□□□□ -1.12
SRSF6-202ENST00000483871 CCKP06307 115 aa8.05□□□□□ -1.12
SRSF6-202ENST00000483871 VPS25Q9BRG1 176 aa8.05□□□□□ -1.12
SRSF6-202ENST00000483871 RPS29P62273 56 aaKnown RBP8.04□□□□□ -1.12
SRSF6-202ENST00000483871 Q6Q795 121 aa8.03□□□□□ -1.12
SRSF6-202ENST00000483871 Q6ZQT0 140 aa8.03□□□□□ -1.12
SRSF6-202ENST00000483871 A0A087WSZ3 146 aa8.02□□□□□ -1.13
SRSF6-202ENST00000483871 LOC110117498A0A087WWA1 95 aa8.02□□□□□ -1.13
SRSF6-202ENST00000483871 LIMD2Q9BT23 127 aa8□□□□□ -1.13
SRSF6-202ENST00000483871 Q5XG85 94 aa7.99□□□□□ -1.13
SRSF6-202ENST00000483871 PDE6GP18545 87 aa7.98□□□□□ -1.13
SRSF6-202ENST00000483871 LPAP08519 4548 aa7.97□□□□□ -1.13
SRSF6-202ENST00000483871 PRR4Q16378 134 aa7.96□□□□□ -1.13
SRSF6-202ENST00000483871 HMCN2Q8NDA2 5059 aa7.96□□□□□ -1.13
SRSF6-202ENST00000483871 C1orf195Q5TG92 126 aa7.95□□□□□ -1.14
SRSF6-202ENST00000483871 ASB16-AS1Q495Z4 193 aa7.92□□□□□ -1.14
SRSF6-202ENST00000483871 SS18L2Q9UHA2 77 aa7.92□□□□□ -1.14
SRSF6-202ENST00000483871 Q96NJ1 140 aa7.91□□□□□ -1.14
SRSF6-202ENST00000483871 IGLV7-46A0A075B6I9 117 aa7.9□□□□□ -1.14
SRSF6-202ENST00000483871 SCGB1A1P11684 91 aa7.9□□□□□ -1.14
SRSF6-202ENST00000483871 DEFB116Q30KQ4 102 aa7.9□□□□□ -1.14
SRSF6-202ENST00000483871 A0A1B0GW54 56 aa7.88□□□□□ -1.15
SRSF6-202ENST00000483871 FP248Q71RG6 208 aaPredicted RBP7.88□□□□□ -1.15
SRSF6-202ENST00000483871 LINC00472Q9H8W2 130 aa7.87□□□□□ -1.15
SRSF6-202ENST00000483871 LRP2P98164 4655 aa7.86□□□□□ -1.15
SRSF6-202ENST00000483871 NREPQ16612 68 aa7.84□□□□□ -1.15
SRSF6-202ENST00000483871 LINC00846Q9NV44 126 aa7.84□□□□□ -1.15
SRSF6-202ENST00000483871 IGKV4-1P06312 121 aa7.83□□□□□ -1.16
SRSF6-202ENST00000483871 ACYP1P07311 99 aa7.82□□□□□ -1.16
SRSF6-202ENST00000483871 C9orf92A6NGG3 77 aa7.8□□□□□ -1.16
SRSF6-202ENST00000483871 KRTAP13-3Q3SY46 172 aa7.8□□□□□ -1.16
SRSF6-202ENST00000483871 Q6ZVQ6 151 aa7.8□□□□□ -1.16
SRSF6-202ENST00000483871 SIGMAR1Q99720 223 aa7.8□□□□□ -1.16
SRSF6-202ENST00000483871 FAM240AA0A1B0GVK7 77 aa7.79□□□□□ -1.16
SRSF6-202ENST00000483871 TPRXLQ17RH7 258 aa7.79□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 12.4 ms