RNA–Protein interactions for RNA: ENST00000483763.5

CDC42SE1-204, Transcript of CDC42 small effector 1, humanhuman

TSL 1 (best)

Gene CDC42SE1, Length 2,379 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE1-204ENST00000483763 PRR15Q8IV56 129 aa5.57□□□□□ -1.52
CDC42SE1-204ENST00000483763 FP248Q71RG6 208 aaPredicted RBP5.56□□□□□ -1.52
CDC42SE1-204ENST00000483763 SERP2Q8N6R1 65 aa5.56□□□□□ -1.52
CDC42SE1-204ENST00000483763 DNAH17Q9UFH2 4485 aa5.56□□□□□ -1.52
CDC42SE1-204ENST00000483763 ERC2-IT1O76042 136 aa5.56□□□□□ -1.52
CDC42SE1-204ENST00000483763 Q6JHZ5 121 aa5.56□□□□□ -1.52
CDC42SE1-204ENST00000483763 PHF5AQ7RTV0 110 aaKnown RBP5.56□□□□□ -1.52
CDC42SE1-204ENST00000483763 LAMTOR3Q9UHA4 124 aa5.56□□□□□ -1.52
CDC42SE1-204ENST00000483763 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP5.56□□□□□ -1.52
CDC42SE1-204ENST00000483763 JMJD7-PLA2G4BH0Y9G9 81 aa5.55□□□□□ -1.52
CDC42SE1-204ENST00000483763 LINC00846Q9NV44 126 aa5.55□□□□□ -1.52
CDC42SE1-204ENST00000483763 FAT2Q9NYQ8 4349 aa5.54□□□□□ -1.52
CDC42SE1-204ENST00000483763 ETDCA0A1B0GVM5 59 aa5.54□□□□□ -1.52
CDC42SE1-204ENST00000483763 LINC01547P58512 204 aaPredicted RBP5.54□□□□□ -1.52
CDC42SE1-204ENST00000483763 RBM3P98179 157 aaKnown RBP5.54□□□□□ -1.52
CDC42SE1-204ENST00000483763 REG3GQ6UW15 175 aa5.54□□□□□ -1.52
CDC42SE1-204ENST00000483763 ST20-AS1Q8NBB2 130 aa5.54□□□□□ -1.52
CDC42SE1-204ENST00000483763 DEFB105AQ8NG35 78 aa5.54□□□□□ -1.52
CDC42SE1-204ENST00000483763 CCKP06307 115 aa5.53□□□□□ -1.52
CDC42SE1-204ENST00000483763 Q8N377 158 aa5.53□□□□□ -1.52
CDC42SE1-204ENST00000483763 FAM30AQ9NZY2 134 aa5.53□□□□□ -1.52
CDC42SE1-204ENST00000483763 PKHD1P08F94 4074 aa5.53□□□□□ -1.52
CDC42SE1-204ENST00000483763 RBM12B-AS1Q9P1G2 102 aa5.53□□□□□ -1.52
CDC42SE1-204ENST00000483763 PRLHP81277 87 aa5.52□□□□□ -1.53
CDC42SE1-204ENST00000483763 Q6ZQT0 140 aa5.52□□□□□ -1.53
CDC42SE1-204ENST00000483763 PKD1P98161 4303 aa5.52□□□□□ -1.53
CDC42SE1-204ENST00000483763 RTL8CO15255 209 aa5.52□□□□□ -1.53
CDC42SE1-204ENST00000483763 PLA2G1BP04054 148 aaKnown RBP5.52□□□□□ -1.53
CDC42SE1-204ENST00000483763 SPACA4Q8TDM5 124 aa5.51□□□□□ -1.53
CDC42SE1-204ENST00000483763 DHRS4-AS1Q9P1J3 65 aa5.51□□□□□ -1.53
CDC42SE1-204ENST00000483763 DNAH11Q96DT5 4516 aa5.51□□□□□ -1.53
CDC42SE1-204ENST00000483763 DNAH8Q96JB1 4490 aa5.51□□□□□ -1.53
CDC42SE1-204ENST00000483763 UBE2BP63146 152 aa5.51□□□□□ -1.53
CDC42SE1-204ENST00000483763 DNAH5Q8TE73 4624 aa5.5□□□□□ -1.53
CDC42SE1-204ENST00000483763 LOC110117498A0A087WWA1 95 aa5.5□□□□□ -1.53
CDC42SE1-204ENST00000483763 LINC00474Q9P2X8 69 aa5.5□□□□□ -1.53
CDC42SE1-204ENST00000483763 BIRC6Q9NR09 4857 aa5.5□□□□□ -1.53
CDC42SE1-204ENST00000483763 TRBV7-4A0A0J9YYF1 115 aa5.5□□□□□ -1.53
CDC42SE1-204ENST00000483763 H3BQ85 93 aa5.49□□□□□ -1.53
CDC42SE1-204ENST00000483763 IGLV5-48A0A075B6I7 105 aa5.49□□□□□ -1.53
CDC42SE1-204ENST00000483763 IGLV5-52A0A0A0MRZ9 124 aa5.49□□□□□ -1.53
CDC42SE1-204ENST00000483763 IGKV3D-7A0A0C4DH55 119 aa5.49□□□□□ -1.53
CDC42SE1-204ENST00000483763 KRTAP10-2P60368 255 aa5.48□□□□□ -1.53
CDC42SE1-204ENST00000483763 HIGD2AQ9BW72 106 aa5.48□□□□□ -1.53
CDC42SE1-204ENST00000483763 A0A087WVE0 104 aa5.47□□□□□ -1.53
CDC42SE1-204ENST00000483763 KIAA1109Q2LD37 5005 aa5.47□□□□□ -1.53
CDC42SE1-204ENST00000483763 SMIM29Q86T20 159 aa5.47□□□□□ -1.53
CDC42SE1-204ENST00000483763 ATP5EP2Q5VTU8 51 aa5.45□□□□□ -1.54
CDC42SE1-204ENST00000483763 A0A0G2JQZ4 141 aa5.45□□□□□ -1.54
CDC42SE1-204ENST00000483763 C8orf87E5RJ46 101 aa5.45□□□□□ -1.54
CDC42SE1-204ENST00000483763 KRTAP13-1Q8IUC0 172 aa5.44□□□□□ -1.54
CDC42SE1-204ENST00000483763 FAM229AH3BQW9 127 aa5.44□□□□□ -1.54
CDC42SE1-204ENST00000483763 PDE6GP18545 87 aa5.44□□□□□ -1.54
CDC42SE1-204ENST00000483763 H0Y9J4 135 aa5.43□□□□□ -1.54
CDC42SE1-204ENST00000483763 KTN1-AS1Q86SY8 53 aa5.43□□□□□ -1.54
CDC42SE1-204ENST00000483763 PLAC8Q9NZF1 115 aa5.43□□□□□ -1.54
CDC42SE1-204ENST00000483763 BCE1O60756 84 aa5.43□□□□□ -1.54
CDC42SE1-204ENST00000483763 UBE2AP49459 152 aa5.42□□□□□ -1.54
CDC42SE1-204ENST00000483763 LRP1BQ9NZR2 4599 aa5.42□□□□□ -1.54
CDC42SE1-204ENST00000483763 A0A1W2PNM2 257 aa5.42□□□□□ -1.54
CDC42SE1-204ENST00000483763 Q6ZVQ6 151 aa5.42□□□□□ -1.54
CDC42SE1-204ENST00000483763 PSORS1C2Q9UIG4 136 aa5.42□□□□□ -1.54
CDC42SE1-204ENST00000483763 DYNC1H1Q14204 4646 aaKnown RBP5.42□□□□□ -1.54
CDC42SE1-204ENST00000483763 C1orf137Q5JT78 98 aa5.41□□□□□ -1.54
CDC42SE1-204ENST00000483763 UBL5Q9BZL1 73 aa5.41□□□□□ -1.54
CDC42SE1-204ENST00000483763 H7BZZ5 65 aa5.41□□□□□ -1.54
CDC42SE1-204ENST00000483763 HAMPP81172 84 aa5.41□□□□□ -1.54
CDC42SE1-204ENST00000483763 Q75L30 129 aa5.4□□□□□ -1.54
CDC42SE1-204ENST00000483763 KRTAP10-1P60331 282 aa5.4□□□□□ -1.55
CDC42SE1-204ENST00000483763 CIRBP-AS1Q8TBR5 109 aa5.39□□□□□ -1.55
CDC42SE1-204ENST00000483763 C20orf197Q8N268 126 aa5.38□□□□□ -1.55
CDC42SE1-204ENST00000483763 MPLKIPQ8TAP9 179 aa5.38□□□□□ -1.55
CDC42SE1-204ENST00000483763 TRAV7A0A075B6U4 112 aa5.38□□□□□ -1.55
CDC42SE1-204ENST00000483763 IGFL1Q6UW32 110 aa5.38□□□□□ -1.55
CDC42SE1-204ENST00000483763 SPRR1BP22528 89 aa5.37□□□□□ -1.55
CDC42SE1-204ENST00000483763 ATP5EP56381 51 aaPredicted RBP5.37□□□□□ -1.55
CDC42SE1-204ENST00000483763 KLKP1Q107X0 134 aa5.37□□□□□ -1.55
CDC42SE1-204ENST00000483763 SCXQ7RTU7 201 aa5.37□□□□□ -1.55
CDC42SE1-204ENST00000483763 Q8NBF4 154 aa5.37□□□□□ -1.55
CDC42SE1-204ENST00000483763 VPS13BQ7Z7G8 4022 aa5.36□□□□□ -1.55
CDC42SE1-204ENST00000483763 Q6ZSA8 131 aa5.36□□□□□ -1.55
CDC42SE1-204ENST00000483763 KRTAP17-1Q9BYP8 105 aa5.36□□□□□ -1.55
CDC42SE1-204ENST00000483763 PCLOQ9Y6V0 5065 aa5.36□□□□□ -1.55
CDC42SE1-204ENST00000483763 IGLV8-61A0A075B6I0 122 aa5.36□□□□□ -1.55
CDC42SE1-204ENST00000483763 SPRR4Q96PI1 79 aa5.36□□□□□ -1.55
CDC42SE1-204ENST00000483763 A0A1B0GVY2 172 aa5.35□□□□□ -1.55
CDC42SE1-204ENST00000483763 F8WEM9 126 aa5.35□□□□□ -1.55
CDC42SE1-204ENST00000483763 ANAPC11Q9NYG5 84 aa5.35□□□□□ -1.55
CDC42SE1-204ENST00000483763 NDUFS5O43920 106 aa5.35□□□□□ -1.55
CDC42SE1-204ENST00000483763 ZNF861PO60384 105 aa5.34□□□□□ -1.55
CDC42SE1-204ENST00000483763 HERC2O95714 4834 aa5.34□□□□□ -1.56
CDC42SE1-204ENST00000483763 NREPQ16612 68 aa5.34□□□□□ -1.56
CDC42SE1-204ENST00000483763 Q8N9L7 120 aa5.34□□□□□ -1.56
CDC42SE1-204ENST00000483763 CXCL6P80162 114 aa5.33□□□□□ -1.56
CDC42SE1-204ENST00000483763 RYR1P21817 5038 aa5.33□□□□□ -1.56
CDC42SE1-204ENST00000483763 IGLV7-43P04211 117 aa5.32□□□□□ -1.56
CDC42SE1-204ENST00000483763 HSPG2P98160 4391 aa5.32□□□□□ -1.56
CDC42SE1-204ENST00000483763 ABCA13Q86UQ4 5058 aa5.32□□□□□ -1.56
CDC42SE1-204ENST00000483763 APOBP04114 4563 aaKnown RBP5.32□□□□□ -1.56
CDC42SE1-204ENST00000483763 IGLV9-49A0A0B4J1Y8 123 aa5.31□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 82.7 ms