RNA–Protein interactions for RNA: ENST00000479555.1

CMSS1-204, Transcript of cms1 ribosomal small subunit homolog (yeast), humanhuman

TSL 4

Gene CMSS1, Length 654 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMSS1-204ENST00000479555 C4orf3Q8WVX3 66 aa2.5□□□□□ -2.01
CMSS1-204ENST00000479555 NOP10Q9NPE3 64 aaKnown RBP2.5□□□□□ -2.01
CMSS1-204ENST00000479555 ZNF706Q9Y5V0 76 aaPredicted RBP2.5□□□□□ -2.01
CMSS1-204ENST00000479555 TENM4Q6N022 2769 aa2.5□□□□□ -2.01
CMSS1-204ENST00000479555 VPS13CQ709C8 3753 aa2.5□□□□□ -2.01
CMSS1-204ENST00000479555 DNAJC13O75165 2243 aa2.49□□□□□ -2.01
CMSS1-204ENST00000479555 A0A1B0GU69 56 aa2.49□□□□□ -2.01
CMSS1-204ENST00000479555 PRB1P04280 392 aa2.49□□□□□ -2.01
CMSS1-204ENST00000479555 MSMBP08118 114 aa2.49□□□□□ -2.01
CMSS1-204ENST00000479555 Q6ZRX8 168 aa2.49□□□□□ -2.01
CMSS1-204ENST00000479555 CAMK2N2Q96S95 79 aa2.49□□□□□ -2.01
CMSS1-204ENST00000479555 COL6A6A6NMZ7 2263 aa2.49□□□□□ -2.01
CMSS1-204ENST00000479555 SVILO95425 2214 aa2.49□□□□□ -2.01
CMSS1-204ENST00000479555 DCHS2Q6V1P9 2916 aa2.48□□□□□ -2.01
CMSS1-204ENST00000479555 TLN1Q9Y490 2541 aaKnown RBP2.48□□□□□ -2.01
CMSS1-204ENST00000479555 LRBAP50851 2863 aa2.48□□□□□ -2.01
CMSS1-204ENST00000479555 A0A1W2PNM2 257 aa2.48□□□□□ -2.01
CMSS1-204ENST00000479555 LELP1Q5T871 98 aa2.48□□□□□ -2.01
CMSS1-204ENST00000479555 WFDC10BQ8IUB3 73 aa2.48□□□□□ -2.01
CMSS1-204ENST00000479555 AKAP9Q99996 3911 aa2.48□□□□□ -2.01
CMSS1-204ENST00000479555 IGLV1-51P01701 117 aa2.47□□□□□ -2.01
CMSS1-204ENST00000479555 SPINK7P58062 85 aa2.47□□□□□ -2.01
CMSS1-204ENST00000479555 MIR22HGQ0VDD5 57 aa2.47□□□□□ -2.01
CMSS1-204ENST00000479555 LY6EQ16553 131 aa2.47□□□□□ -2.01
CMSS1-204ENST00000479555 UNQ6190/PRO20217Q6UXQ8 127 aa2.47□□□□□ -2.01
CMSS1-204ENST00000479555 PP632Q6XCG6 107 aa2.47□□□□□ -2.01
CMSS1-204ENST00000479555 WFDC13Q8IUB5 93 aa2.47□□□□□ -2.01
CMSS1-204ENST00000479555 ANAPC11Q9NYG5 84 aa2.47□□□□□ -2.01
CMSS1-204ENST00000479555 GCN1Q92616 2671 aaKnown RBP2.47□□□□□ -2.01
CMSS1-204ENST00000479555 FLNCQ14315 2725 aa2.47□□□□□ -2.01
CMSS1-204ENST00000479555 B4DSR2 109 aa2.46□□□□□ -2.02
CMSS1-204ENST00000479555 TLX1NBP0CAT3 122 aa2.46□□□□□ -2.02
CMSS1-204ENST00000479555 RPL37AP61513 92 aaKnown RBP2.46□□□□□ -2.02
CMSS1-204ENST00000479555 DEFB105AQ8NG35 78 aa2.46□□□□□ -2.02
CMSS1-204ENST00000479555 C7orf33Q8WU49 177 aa2.46□□□□□ -2.02
CMSS1-204ENST00000479555 C6orf48Q9UBA6 75 aa2.46□□□□□ -2.02
CMSS1-204ENST00000479555 TACC2O95359 2948 aa2.46□□□□□ -2.02
CMSS1-204ENST00000479555 CELSR2Q9HCU4 2923 aa2.46□□□□□ -2.02
CMSS1-204ENST00000479555 CADP27708 2225 aa2.46□□□□□ -2.02
CMSS1-204ENST00000479555 FAM208BQ5VWN6 2430 aa2.46□□□□□ -2.02
CMSS1-204ENST00000479555 CSMD2Q7Z408 3487 aa2.45□□□□□ -2.02
CMSS1-204ENST00000479555 NBASA2RRP1 2371 aa2.45□□□□□ -2.02
CMSS1-204ENST00000479555 SPTA1P02549 2419 aa2.45□□□□□ -2.02
CMSS1-204ENST00000479555 SPRR1AP35321 89 aa2.45□□□□□ -2.02
CMSS1-204ENST00000479555 ROMO1P60602 79 aa2.45□□□□□ -2.02
CMSS1-204ENST00000479555 C1orf134Q5TEV5 83 aa2.45□□□□□ -2.02
CMSS1-204ENST00000479555 ZNF462Q96JM2 2506 aa2.45□□□□□ -2.02
CMSS1-204ENST00000479555 UBR5O95071 2799 aaPredicted RBP2.45□□□□□ -2.02
CMSS1-204ENST00000479555 RP1L1Q8IWN7 2480 aaPredicted RBP2.44□□□□□ -2.02
CMSS1-204ENST00000479555 A0A087WSZ3 146 aa2.44□□□□□ -2.02
CMSS1-204ENST00000479555 IGKV2-24A0A0C4DH68 120 aa2.44□□□□□ -2.02
CMSS1-204ENST00000479555 K7ERS5 55 aa2.44□□□□□ -2.02
CMSS1-204ENST00000479555 BRD3OSQ6XYD6 125 aa2.44□□□□□ -2.02
CMSS1-204ENST00000479555 DMAC1Q96GE9 116 aa2.44□□□□□ -2.02
CMSS1-204ENST00000479555 CSMD1Q96PZ7 3565 aa2.44□□□□□ -2.02
CMSS1-204ENST00000479555 HRNRQ86YZ3 2850 aaPredicted RBP2.44□□□□□ -2.02
CMSS1-204ENST00000479555 ASH1LQ9NR48 2969 aaKnown RBP2.44□□□□□ -2.02
CMSS1-204ENST00000479555 PCNX1Q96RV3 2341 aa2.43□□□□□ -2.02
CMSS1-204ENST00000479555 CELSR1Q9NYQ6 3014 aa2.43□□□□□ -2.02
CMSS1-204ENST00000479555 MYO18BQ8IUG5 2567 aa2.43□□□□□ -2.02
CMSS1-204ENST00000479555 IGLV1-50A0A075B6I6 118 aa2.43□□□□□ -2.02
CMSS1-204ENST00000479555 H3BNG1 76 aa2.43□□□□□ -2.02
CMSS1-204ENST00000479555 HRES1P13985 223 aa2.43□□□□□ -2.02
CMSS1-204ENST00000479555 CSAG1Q6PB30 78 aa2.43□□□□□ -2.02
CMSS1-204ENST00000479555 CLPSL2Q6UWE3 100 aa2.43□□□□□ -2.02
CMSS1-204ENST00000479555 Q8NDZ9 215 aa2.43□□□□□ -2.02
CMSS1-204ENST00000479555 HIVEP3Q5T1R4 2406 aa2.43□□□□□ -2.02
CMSS1-204ENST00000479555 ABCA1O95477 2261 aa2.43□□□□□ -2.02
CMSS1-204ENST00000479555 CENPEQ02224 2701 aa2.42□□□□□ -2.02
CMSS1-204ENST00000479555 IGLV10-54A0A075B6I4 117 aa2.42□□□□□ -2.02
CMSS1-204ENST00000479555 CASC10Q5T4H9 136 aa2.42□□□□□ -2.02
CMSS1-204ENST00000479555 IGFL1Q6UW32 110 aa2.42□□□□□ -2.02
CMSS1-204ENST00000479555 HELZ2Q9BYK8 2649 aaKnown RBP2.42□□□□□ -2.02
CMSS1-204ENST00000479555 FBN2P35556 2912 aa2.41□□□□□ -2.02
CMSS1-204ENST00000479555 MAP1AP78559 2803 aaPredicted RBP2.41□□□□□ -2.02
CMSS1-204ENST00000479555 USP9XQ93008 2570 aaPredicted RBP2.41□□□□□ -2.02
CMSS1-204ENST00000479555 MMP24-AS1A0A0U1RRL7 71 aa2.41□□□□□ -2.02
CMSS1-204ENST00000479555 DEFB130BP0DP73 79 aa2.41□□□□□ -2.02
CMSS1-204ENST00000479555 DEFB130AP0DP74 79 aa2.41□□□□□ -2.02
CMSS1-204ENST00000479555 KRTAP25-1Q3LHN0 102 aa2.41□□□□□ -2.02
CMSS1-204ENST00000479555 PCOTHQ58A44 107 aa2.41□□□□□ -2.02
CMSS1-204ENST00000479555 ZFHX3Q15911 3703 aa2.41□□□□□ -2.02
CMSS1-204ENST00000479555 ZNF469Q96JG9 3925 aaPredicted RBP2.41□□□□□ -2.02
CMSS1-204ENST00000479555 DOPEY2Q9Y3R5 2298 aa2.4□□□□□ -2.02
CMSS1-204ENST00000479555 KRTAP4-16G5E9R7 235 aaPredicted RBP2.4□□□□□ -2.03
CMSS1-204ENST00000479555 SPRR1BP22528 89 aa2.4□□□□□ -2.03
CMSS1-204ENST00000479555 C15orf56Q8N910 161 aa2.4□□□□□ -2.03
CMSS1-204ENST00000479555 MRPL34Q9BQ48 92 aaKnown RBP2.4□□□□□ -2.03
CMSS1-204ENST00000479555 LINC00472Q9H8W2 130 aa2.4□□□□□ -2.03
CMSS1-204ENST00000479555 FASNP49327 2511 aaKnown RBP2.4□□□□□ -2.03
CMSS1-204ENST00000479555 SPTBN1Q01082 2364 aaKnown RBP2.39□□□□□ -2.03
CMSS1-204ENST00000479555 ICE1Q9Y2F5 2266 aa2.39□□□□□ -2.03
CMSS1-204ENST00000479555 J3QKU1 62 aa2.39□□□□□ -2.03
CMSS1-204ENST00000479555 ZNF861PO60384 105 aa2.39□□□□□ -2.03
CMSS1-204ENST00000479555 SPART-AS1P0CW21 52 aa2.39□□□□□ -2.03
CMSS1-204ENST00000479555 CCL19Q99731 98 aa2.39□□□□□ -2.03
CMSS1-204ENST00000479555 BAHCC1Q9P281 2608 aa2.39□□□□□ -2.03
CMSS1-204ENST00000479555 LRRK2Q5S007 2527 aa2.39□□□□□ -2.03
CMSS1-204ENST00000479555 SETXQ7Z333 2677 aaKnown RBP2.39□□□□□ -2.03
CMSS1-204ENST00000479555 ABCA4P78363 2273 aa2.39□□□□□ -2.03
Retrieved 100 of 20,778 RNA–protein pairs in 46.8 ms