RNA–Protein interactions for RNA: ENST00000479135.5

EWSR1-216, Transcript of EWS RNA binding protein 1, humanhuman

TSL 1 (best)

Gene EWSR1, Length 7,285 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EWSR1-216ENST00000479135 CEP350Q5VT06 3117 aa6.54□□□□□ -1.36
EWSR1-216ENST00000479135 CHD7Q9P2D1 2997 aa6.53□□□□□ -1.36
EWSR1-216ENST00000479135 KRTAP10-3P60369 221 aa6.53□□□□□ -1.36
EWSR1-216ENST00000479135 CHD8Q9HCK8 2581 aa6.53□□□□□ -1.36
EWSR1-216ENST00000479135 JMJD1CQ15652 2540 aa6.53□□□□□ -1.36
EWSR1-216ENST00000479135 SPRR1BP22528 89 aa6.51□□□□□ -1.37
EWSR1-216ENST00000479135 ABCA12Q86UK0 2595 aa6.5□□□□□ -1.37
EWSR1-216ENST00000479135 HTTP42858 3142 aa6.5□□□□□ -1.37
EWSR1-216ENST00000479135 TNP1P09430 55 aa6.49□□□□□ -1.37
EWSR1-216ENST00000479135 XIRP2A4UGR9 3374 aa6.49□□□□□ -1.37
EWSR1-216ENST00000479135 PANO1I0J062 215 aa6.48□□□□□ -1.37
EWSR1-216ENST00000479135 A6NN06 94 aa6.48□□□□□ -1.37
EWSR1-216ENST00000479135 DNAH12Q6ZR08 3092 aa6.47□□□□□ -1.37
EWSR1-216ENST00000479135 A0A096LNT2 108 aa6.45□□□□□ -1.38
EWSR1-216ENST00000479135 KRTAP26-1Q6PEX3 210 aa6.45□□□□□ -1.38
EWSR1-216ENST00000479135 POLQO75417 2590 aa6.45□□□□□ -1.38
EWSR1-216ENST00000479135 PRRC2CQ9Y520 2896 aaKnown RBP6.44□□□□□ -1.38
EWSR1-216ENST00000479135 KRTAP10-8P60410 259 aa6.43□□□□□ -1.38
EWSR1-216ENST00000479135 MTORP42345 2549 aa6.42□□□□□ -1.38
EWSR1-216ENST00000479135 LINC00472Q9H8W2 130 aa6.41□□□□□ -1.38
EWSR1-216ENST00000479135 TRANK1O15050 2925 aa6.4□□□□□ -1.38
EWSR1-216ENST00000479135 KRTAP4-16G5E9R7 235 aaPredicted RBP6.4□□□□□ -1.38
EWSR1-216ENST00000479135 A0A1B0GVY2 172 aa6.38□□□□□ -1.39
EWSR1-216ENST00000479135 ASB16-AS1Q495Z4 193 aa6.36□□□□□ -1.39
EWSR1-216ENST00000479135 SPTBN4Q9H254 2564 aa6.36□□□□□ -1.39
EWSR1-216ENST00000479135 A0A087X002 238 aa6.33□□□□□ -1.4
EWSR1-216ENST00000479135 NOTCH2NLQ7Z3S9 236 aa6.33□□□□□ -1.4
EWSR1-216ENST00000479135 EPG5Q9HCE0 2579 aa6.33□□□□□ -1.4
EWSR1-216ENST00000479135 PLAC8Q9NZF1 115 aa6.33□□□□□ -1.4
EWSR1-216ENST00000479135 PP632Q6XCG6 107 aa6.31□□□□□ -1.4
EWSR1-216ENST00000479135 C5orf42Q9H799 3197 aa6.28□□□□□ -1.4
EWSR1-216ENST00000479135 DMBT1Q9UGM3 2413 aaPredicted RBP6.28□□□□□ -1.4
EWSR1-216ENST00000479135 A0A0C4DFX4 3053 aa6.27□□□□□ -1.4
EWSR1-216ENST00000479135 KRTAP11-1Q8IUC1 163 aa6.27□□□□□ -1.41
EWSR1-216ENST00000479135 KRTAP10-1P60331 282 aa6.26□□□□□ -1.41
EWSR1-216ENST00000479135 KRTAP10-2P60368 255 aa6.25□□□□□ -1.41
EWSR1-216ENST00000479135 RANBP2P49792 3224 aaKnown RBP6.24□□□□□ -1.41
EWSR1-216ENST00000479135 ZNF292O60281 2723 aa6.23□□□□□ -1.41
EWSR1-216ENST00000479135 CDH23Q9H251 3354 aa6.22□□□□□ -1.41
EWSR1-216ENST00000479135 BRCA2P51587 3418 aa6.22□□□□□ -1.41
EWSR1-216ENST00000479135 ANKRD17O75179 2603 aaKnown RBP6.21□□□□□ -1.42
EWSR1-216ENST00000479135 DNAH14Q0VDD8 3507 aa6.2□□□□□ -1.42
EWSR1-216ENST00000479135 SZT2Q5T011 3432 aa6.2□□□□□ -1.42
EWSR1-216ENST00000479135 USP34Q70CQ2 3546 aa6.13□□□□□ -1.43
EWSR1-216ENST00000479135 KRTAP1-3Q8IUG1 177 aa6.12□□□□□ -1.43
EWSR1-216ENST00000479135 SPRR1AP35321 89 aa6.11□□□□□ -1.43
EWSR1-216ENST00000479135 USP24Q9UPU5 2620 aa6.1□□□□□ -1.43
EWSR1-216ENST00000479135 KRTAP1-5Q9BYS1 174 aa6.09□□□□□ -1.43
EWSR1-216ENST00000479135 CELSR3Q9NYQ7 3312 aa6.09□□□□□ -1.43
EWSR1-216ENST00000479135 MKI67P46013 3256 aaKnown RBP6.09□□□□□ -1.44
EWSR1-216ENST00000479135 KRTAP1-1Q07627 177 aa6.08□□□□□ -1.44
EWSR1-216ENST00000479135 LAMA3Q16787 3333 aa6.07□□□□□ -1.44
EWSR1-216ENST00000479135 CFAP54Q96N23 3096 aa6.06□□□□□ -1.44
EWSR1-216ENST00000479135 KRTAP29-1A8MX34 341 aaPredicted RBP6.05□□□□□ -1.44
EWSR1-216ENST00000479135 FASNP49327 2511 aaKnown RBP6.05□□□□□ -1.44
EWSR1-216ENST00000479135 HECTD1Q9ULT8 2610 aa6.03□□□□□ -1.44
EWSR1-216ENST00000479135 REV3LO60673 3130 aa6.03□□□□□ -1.44
EWSR1-216ENST00000479135 FLNAP21333 2647 aaKnown RBP6.02□□□□□ -1.45
EWSR1-216ENST00000479135 CENPEQ02224 2701 aa6.01□□□□□ -1.45
EWSR1-216ENST00000479135 KRTAP10-10P60014 251 aa5.98□□□□□ -1.45
EWSR1-216ENST00000479135 ATRQ13535 2644 aa5.97□□□□□ -1.45
EWSR1-216ENST00000479135 LAMA2P24043 3122 aaKnown RBP5.95□□□□□ -1.46
EWSR1-216ENST00000479135 FREM2Q5SZK8 3169 aa5.94□□□□□ -1.46
EWSR1-216ENST00000479135 MYO15AQ9UKN7 3530 aa5.94□□□□□ -1.46
EWSR1-216ENST00000479135 AKAP13Q12802 2813 aa5.94□□□□□ -1.46
EWSR1-216ENST00000479135 UNC79Q9P2D8 2635 aa5.94□□□□□ -1.46
EWSR1-216ENST00000479135 CRCT1Q9UGL9 99 aa5.94□□□□□ -1.46
EWSR1-216ENST00000479135 MGAQ8IWI9 3026 aa5.94□□□□□ -1.46
EWSR1-216ENST00000479135 FLNBO75369 2602 aaKnown RBP5.94□□□□□ -1.46
EWSR1-216ENST00000479135 MGAM2Q2M2H8 2515 aa5.94□□□□□ -1.46
EWSR1-216ENST00000479135 KRTAP12-2P59991 146 aa5.93□□□□□ -1.46
EWSR1-216ENST00000479135 NBEAQ8NFP9 2946 aa5.92□□□□□ -1.46
EWSR1-216ENST00000479135 H0YAA0 97 aa5.92□□□□□ -1.46
EWSR1-216ENST00000479135 UNC80Q8N2C7 3258 aa5.91□□□□□ -1.46
EWSR1-216ENST00000479135 SPTBN5Q9NRC6 3674 aaKnown RBP5.91□□□□□ -1.46
EWSR1-216ENST00000479135 LCE6AA0A183 80 aa5.91□□□□□ -1.46
EWSR1-216ENST00000479135 ITPR3Q14573 2671 aa5.9□□□□□ -1.47
EWSR1-216ENST00000479135 VCANP13611 3396 aa5.9□□□□□ -1.47
EWSR1-216ENST00000479135 STAB2Q8WWQ8 2551 aa5.89□□□□□ -1.47
EWSR1-216ENST00000479135 GCN1Q92616 2671 aaKnown RBP5.87□□□□□ -1.47
EWSR1-216ENST00000479135 HELZ2Q9BYK8 2649 aaKnown RBP5.86□□□□□ -1.47
EWSR1-216ENST00000479135 CFAP46Q8IYW2 2715 aa5.85□□□□□ -1.47
EWSR1-216ENST00000479135 STAB1Q9NY15 2570 aa5.85□□□□□ -1.47
EWSR1-216ENST00000479135 PRO2289Q9P1D8 64 aa5.85□□□□□ -1.47
EWSR1-216ENST00000479135 FLNCQ14315 2725 aa5.85□□□□□ -1.47
EWSR1-216ENST00000479135 Q6ZRN7 208 aaPredicted RBP5.85□□□□□ -1.47
EWSR1-216ENST00000479135 DSPP15924 2871 aaKnown RBP5.84□□□□□ -1.47
EWSR1-216ENST00000479135 IGSF10Q6WRI0 2623 aa5.84□□□□□ -1.48
EWSR1-216ENST00000479135 TRIOO75962 3097 aa5.83□□□□□ -1.48
EWSR1-216ENST00000479135 WDFY3Q8IZQ1 3526 aa5.83□□□□□ -1.48
EWSR1-216ENST00000479135 WDFY4Q6ZS81 3184 aa5.82□□□□□ -1.48
EWSR1-216ENST00000479135 PRUNE2Q8WUY3 3088 aa5.8□□□□□ -1.48
EWSR1-216ENST00000479135 KRTAP13-2Q52LG2 175 aa5.8□□□□□ -1.48
EWSR1-216ENST00000479135 ASPMQ8IZT6 3477 aa5.79□□□□□ -1.48
EWSR1-216ENST00000479135 SPEGQ15772 3267 aa5.78□□□□□ -1.48
EWSR1-216ENST00000479135 MAST4O15021 2626 aa5.78□□□□□ -1.48
EWSR1-216ENST00000479135 CHD6Q8TD26 2715 aa5.77□□□□□ -1.49
EWSR1-216ENST00000479135 TEP1Q99973 2627 aaKnown RBP5.75□□□□□ -1.49
EWSR1-216ENST00000479135 MAP1AP78559 2803 aaPredicted RBP5.75□□□□□ -1.49
EWSR1-216ENST00000479135 FRYQ5TBA9 3013 aa5.75□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms