RNA–Protein interactions for RNA: ENST00000473214.1

RTF1-203, Transcript of RTF1 homolog, Paf1/RNA polymerase II complex component, humanhuman

TSL 2

Gene RTF1, Length 475 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTF1-203ENST00000473214 HEATR1Q9H583 2144 aaKnown RBP3.34□□□□□ -1.88
RTF1-203ENST00000473214 CSMD3Q7Z407 3707 aa3.33□□□□□ -1.88
RTF1-203ENST00000473214 IGKV3D-7A0A0C4DH55 119 aa3.33□□□□□ -1.88
RTF1-203ENST00000473214 IGKV3OR2-268A0A0C4DH90 116 aa3.33□□□□□ -1.88
RTF1-203ENST00000473214 TRBV6-5A0A0K0K1A5 114 aa3.33□□□□□ -1.88
RTF1-203ENST00000473214 SNRPGP15A8MWD9 76 aa3.33□□□□□ -1.88
RTF1-203ENST00000473214 DOCK11Q5JSL3 2073 aa3.32□□□□□ -1.88
RTF1-203ENST00000473214 WNK2Q9Y3S1 2297 aa3.32□□□□□ -1.88
RTF1-203ENST00000473214 LCE6AA0A183 80 aa3.32□□□□□ -1.88
RTF1-203ENST00000473214 CCL18P55774 89 aa3.32□□□□□ -1.88
RTF1-203ENST00000473214 ATXN8Q156A1 80 aa3.32□□□□□ -1.88
RTF1-203ENST00000473214 KIAA1109Q2LD37 5005 aa3.32□□□□□ -1.88
RTF1-203ENST00000473214 STARD9Q9P2P6 4700 aa3.31□□□□□ -1.88
RTF1-203ENST00000473214 FRAS1Q86XX4 4008 aa3.31□□□□□ -1.88
RTF1-203ENST00000473214 LCE1FQ5T754 118 aa3.31□□□□□ -1.88
RTF1-203ENST00000473214 KRTAP11-1Q8IUC1 163 aa3.31□□□□□ -1.88
RTF1-203ENST00000473214 DEFB108BQ8NET1 73 aa3.31□□□□□ -1.88
RTF1-203ENST00000473214 TP53TG3Q9ULZ0 132 aa3.31□□□□□ -1.88
RTF1-203ENST00000473214 SNURFQ9Y675 71 aa3.31□□□□□ -1.88
RTF1-203ENST00000473214 LINC01558Q9Y6Z2 57 aa3.31□□□□□ -1.88
RTF1-203ENST00000473214 V9GYV3 84 aa3.31□□□□□ -1.88
RTF1-203ENST00000473214 DNAH7Q8WXX0 4024 aa3.31□□□□□ -1.88
RTF1-203ENST00000473214 A0A087WVE0 104 aa3.3□□□□□ -1.88
RTF1-203ENST00000473214 CTXND1A0A1B0GTU2 59 aa3.3□□□□□ -1.88
RTF1-203ENST00000473214 M0R135 149 aa3.3□□□□□ -1.88
RTF1-203ENST00000473214 RPL37AP61513 92 aaKnown RBP3.3□□□□□ -1.88
RTF1-203ENST00000473214 C10orf55Q5SWW7 151 aa3.3□□□□□ -1.88
RTF1-203ENST00000473214 ZNF563Q8TA94 476 aa3.3□□□□□ -1.88
RTF1-203ENST00000473214 HUWE1Q7Z6Z7 4374 aaKnown RBP3.3□□□□□ -1.88
RTF1-203ENST00000473214 ABCA13Q86UQ4 5058 aa3.3□□□□□ -1.88
RTF1-203ENST00000473214 STAB2Q8WWQ8 2551 aa3.29□□□□□ -1.88
RTF1-203ENST00000473214 IGLV6-57P01721 117 aa3.29□□□□□ -1.88
RTF1-203ENST00000473214 S100A3P33764 101 aa3.29□□□□□ -1.88
RTF1-203ENST00000473214 DEFB112Q30KQ8 113 aa3.29□□□□□ -1.88
RTF1-203ENST00000473214 KRTAP4-3Q9BYR4 195 aa3.29□□□□□ -1.88
RTF1-203ENST00000473214 TMEM14CQ9P0S9 112 aa3.29□□□□□ -1.88
RTF1-203ENST00000473214 A0A1W2PNN7 141 aa3.28□□□□□ -1.88
RTF1-203ENST00000473214 UQCR11O14957 56 aa3.28□□□□□ -1.88
RTF1-203ENST00000473214 BRD3OSQ6XYD6 125 aa3.28□□□□□ -1.88
RTF1-203ENST00000473214 H3BRN7 92 aa3.27□□□□□ -1.89
RTF1-203ENST00000473214 RNASE3P12724 160 aaKnown RBP3.27□□□□□ -1.89
RTF1-203ENST00000473214 IGKV2-40A0A087WW87 121 aaPredicted RBP3.26□□□□□ -1.89
RTF1-203ENST00000473214 LRCOL1A6NCL2 159 aa3.26□□□□□ -1.89
RTF1-203ENST00000473214 IGKV2D-40P01614 121 aaPredicted RBP3.26□□□□□ -1.89
RTF1-203ENST00000473214 FXYD3Q14802 87 aa3.26□□□□□ -1.89
RTF1-203ENST00000473214 CYYR1Q96J86 154 aa3.26□□□□□ -1.89
RTF1-203ENST00000473214 IGKV2-28A0A075B6P5 120 aa3.25□□□□□ -1.89
RTF1-203ENST00000473214 TRBV7-4A0A0J9YYF1 115 aa3.25□□□□□ -1.89
RTF1-203ENST00000473214 NBDYA0A0U1RRE5 68 aa3.25□□□□□ -1.89
RTF1-203ENST00000473214 IGKV2-29A2NJV5 120 aaPredicted RBP3.25□□□□□ -1.89
RTF1-203ENST00000473214 IGKV2D-28P01615 120 aa3.25□□□□□ -1.89
RTF1-203ENST00000473214 MGPP08493 103 aa3.25□□□□□ -1.89
RTF1-203ENST00000473214 ALMS1Q8TCU4 4167 aa3.25□□□□□ -1.89
RTF1-203ENST00000473214 PLECQ15149 4684 aaKnown RBP3.24□□□□□ -1.89
RTF1-203ENST00000473214 TRGV4A0A0C4DH28 118 aa3.24□□□□□ -1.89
RTF1-203ENST00000473214 A0A1B0GUT8 65 aa3.24□□□□□ -1.89
RTF1-203ENST00000473214 LINC00315P59091 139 aa3.24□□□□□ -1.89
RTF1-203ENST00000473214 RPS27LQ71UM5 84 aaKnown RBP3.24□□□□□ -1.89
RTF1-203ENST00000473214 DEFB107AQ8IZN7 70 aa3.24□□□□□ -1.89
RTF1-203ENST00000473214 A0A087WTM6 91 aa3.23□□□□□ -1.89
RTF1-203ENST00000473214 FXYD4P59646 89 aa3.23□□□□□ -1.89
RTF1-203ENST00000473214 GDF5OSQ5U4N7 250 aa3.23□□□□□ -1.89
RTF1-203ENST00000473214 LINC00322Q6ZN03 302 aaPredicted RBP3.23□□□□□ -1.89
RTF1-203ENST00000473214 C5orf56Q8N8D9 126 aa3.23□□□□□ -1.89
RTF1-203ENST00000473214 LINC00304Q8N9R0 145 aa3.23□□□□□ -1.89
RTF1-203ENST00000473214 WFDC6Q9BQY6 131 aa3.23□□□□□ -1.89
RTF1-203ENST00000473214 HECTD4Q9Y4D8 3996 aa3.23□□□□□ -1.89
RTF1-203ENST00000473214 UBR4Q5T4S7 5183 aa3.22□□□□□ -1.89
RTF1-203ENST00000473214 MRPL33O75394 65 aaKnown RBP3.22□□□□□ -1.89
RTF1-203ENST00000473214 PRB3Q04118 309 aaPredicted RBP3.22□□□□□ -1.89
RTF1-203ENST00000473214 HCP5Q6MZN7 132 aa3.22□□□□□ -1.89
RTF1-203ENST00000473214 LINC00846Q9NV44 126 aa3.22□□□□□ -1.89
RTF1-203ENST00000473214 ANAPC11Q9NYG5 84 aa3.22□□□□□ -1.89
RTF1-203ENST00000473214 ZNF137PP52743 207 aa3.21□□□□□ -1.9
RTF1-203ENST00000473214 DNAH10Q8IVF4 4471 aa3.21□□□□□ -1.9
RTF1-203ENST00000473214 IGKV2D-29A0A075B6S2 120 aaPredicted RBP3.2□□□□□ -1.9
RTF1-203ENST00000473214 LINC01549A6NIU2 74 aa3.2□□□□□ -1.9
RTF1-203ENST00000473214 IFI6P09912 130 aa3.2□□□□□ -1.9
RTF1-203ENST00000473214 LINC00208Q96KT6 92 aa3.2□□□□□ -1.9
RTF1-203ENST00000473214 HERC1Q15751 4861 aa3.2□□□□□ -1.9
RTF1-203ENST00000473214 IGKV2-24A0A0C4DH68 120 aa3.19□□□□□ -1.9
RTF1-203ENST00000473214 COA5Q86WW8 74 aa3.19□□□□□ -1.9
RTF1-203ENST00000473214 H0Y9P7 68 aa3.18□□□□□ -1.9
RTF1-203ENST00000473214 INE1O15225 51 aa3.18□□□□□ -1.9
RTF1-203ENST00000473214 KRTAP13-2Q52LG2 175 aa3.18□□□□□ -1.9
RTF1-203ENST00000473214 PRR9Q5T870 116 aa3.18□□□□□ -1.9
RTF1-203ENST00000473214 WFDC9Q8NEX5 89 aa3.18□□□□□ -1.9
RTF1-203ENST00000473214 SPRR4Q96PI1 79 aa3.18□□□□□ -1.9
RTF1-203ENST00000473214 PLAC8Q9NZF1 115 aa3.18□□□□□ -1.9
RTF1-203ENST00000473214 LOC110117498A0A087WWA1 95 aa3.17□□□□□ -1.9
RTF1-203ENST00000473214 TRGV1A0A0A0MS02 117 aa3.17□□□□□ -1.9
RTF1-203ENST00000473214 TRAV1-2A0A0B4J238 106 aa3.17□□□□□ -1.9
RTF1-203ENST00000473214 A0A1B0GVY2 172 aa3.17□□□□□ -1.9
RTF1-203ENST00000473214 NDUFB1O75438 58 aa3.17□□□□□ -1.9
RTF1-203ENST00000473214 COX17Q14061 63 aa3.17□□□□□ -1.9
RTF1-203ENST00000473214 SMIM4Q8WVI0 70 aa3.17□□□□□ -1.9
RTF1-203ENST00000473214 TRGV2A0A075B6R0 118 aa3.16□□□□□ -1.9
RTF1-203ENST00000473214 C10orf99Q6UWK7 81 aa3.16□□□□□ -1.9
RTF1-203ENST00000473214 KRTAP5-2Q701N4 177 aa3.16□□□□□ -1.9
RTF1-203ENST00000473214 Q96NJ1 140 aa3.16□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 89.9 ms