RNA–Protein interactions for RNA: ENST00000472223.5

CCM2-205, Transcript of CCM2 scaffold protein, humanhuman

TSL 3

Gene CCM2, Length 981 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-205ENST00000472223 TMEM256-PLSCR3K7ERE1 68 aa10.02□□□□□ -0.81
CCM2-205ENST00000472223 C9orf153Q5TBE3 101 aa10.02□□□□□ -0.81
CCM2-205ENST00000472223 Q8N377 158 aa10.02□□□□□ -0.81
CCM2-205ENST00000472223 FLG2Q5D862 2391 aaPredicted RBP10.02□□□□□ -0.81
CCM2-205ENST00000472223 KRTAP29-1A8MX34 341 aaPredicted RBP10.01□□□□□ -0.81
CCM2-205ENST00000472223 J3QL48 77 aa10.01□□□□□ -0.81
CCM2-205ENST00000472223 SPCS1Q9Y6A9 102 aa10.01□□□□□ -0.81
CCM2-205ENST00000472223 A0A087X002 238 aa10□□□□□ -0.81
CCM2-205ENST00000472223 LINC01547P58512 204 aaPredicted RBP10□□□□□ -0.81
CCM2-205ENST00000472223 SSBP3-AS1Q7Z2R9 100 aa9.98□□□□□ -0.81
CCM2-205ENST00000472223 BAALC-AS2P0C853 105 aa9.97□□□□□ -0.81
CCM2-205ENST00000472223 MOBPQ13875 183 aa9.97□□□□□ -0.81
CCM2-205ENST00000472223 GTF2H5Q6ZYL4 71 aa9.97□□□□□ -0.81
CCM2-205ENST00000472223 Q8NBF4 154 aa9.97□□□□□ -0.81
CCM2-205ENST00000472223 C9JAW5 83 aa9.96□□□□□ -0.82
CCM2-205ENST00000472223 C4orf48Q5BLP8 95 aa9.96□□□□□ -0.82
CCM2-205ENST00000472223 C3orf22Q8N5N4 141 aa9.96□□□□□ -0.82
CCM2-205ENST00000472223 ABCA13Q86UQ4 5058 aa9.96□□□□□ -0.82
CCM2-205ENST00000472223 H3BMG7 143 aa9.95□□□□□ -0.82
CCM2-205ENST00000472223 NDUFV3P56181 108 aaKnown RBP9.95□□□□□ -0.82
CCM2-205ENST00000472223 SMIM29Q86T20 159 aa9.95□□□□□ -0.82
CCM2-205ENST00000472223 KRTAP10-8P60410 259 aa9.94□□□□□ -0.82
CCM2-205ENST00000472223 UBE2V1Q13404 147 aa9.94□□□□□ -0.82
CCM2-205ENST00000472223 KRTAP13-2Q52LG2 175 aa9.94□□□□□ -0.82
CCM2-205ENST00000472223 K7EP34 96 aa9.92□□□□□ -0.82
CCM2-205ENST00000472223 Q6JHZ5 121 aa9.91□□□□□ -0.82
CCM2-205ENST00000472223 ANKRD29Q8N6D5 301 aa9.91□□□□□ -0.82
CCM2-205ENST00000472223 SPAG11AQ6PDA7 123 aa9.9□□□□□ -0.82
CCM2-205ENST00000472223 LINC00304Q8N9R0 145 aa9.9□□□□□ -0.82
CCM2-205ENST00000472223 H3BT86 120 aa9.88□□□□□ -0.83
CCM2-205ENST00000472223 FAT3Q8TDW7 4589 aa9.88□□□□□ -0.83
CCM2-205ENST00000472223 MYCBP2O75592 4640 aa9.87□□□□□ -0.83
CCM2-205ENST00000472223 IGLV8-61A0A075B6I0 122 aa9.86□□□□□ -0.83
CCM2-205ENST00000472223 JMJD7-PLA2G4BH0Y9G9 81 aa9.86□□□□□ -0.83
CCM2-205ENST00000472223 MT1HL1P0DM35 61 aa9.86□□□□□ -0.83
CCM2-205ENST00000472223 LRP1Q07954 4544 aaKnown RBP9.86□□□□□ -0.83
CCM2-205ENST00000472223 RBM3P98179 157 aaKnown RBP9.85□□□□□ -0.83
CCM2-205ENST00000472223 PCLOQ9Y6V0 5065 aa9.85□□□□□ -0.83
CCM2-205ENST00000472223 A0A1B0GV72 72 aa9.84□□□□□ -0.83
CCM2-205ENST00000472223 DSCR8Q96T75 97 aa9.84□□□□□ -0.83
CCM2-205ENST00000472223 SPINK1P00995 79 aa9.83□□□□□ -0.84
CCM2-205ENST00000472223 MTURNQ8N3F0 131 aa9.83□□□□□ -0.84
CCM2-205ENST00000472223 CD164Q04900 197 aa9.81□□□□□ -0.84
CCM2-205ENST00000472223 IGFL1Q6UW32 110 aa9.81□□□□□ -0.84
CCM2-205ENST00000472223 HRCT1Q6UXD1 115 aa9.81□□□□□ -0.84
CCM2-205ENST00000472223 F8W1H4 67 aa9.8□□□□□ -0.84
CCM2-205ENST00000472223 LIMD2Q9BT23 127 aa9.78□□□□□ -0.84
CCM2-205ENST00000472223 A0A1B0GV90 55 aa9.77□□□□□ -0.85
CCM2-205ENST00000472223 PDE6GP18545 87 aa9.77□□□□□ -0.85
CCM2-205ENST00000472223 C21orf62-AS1Q17RA5 79 aa9.77□□□□□ -0.85
CCM2-205ENST00000472223 TNXBP22105 4242 aa9.76□□□□□ -0.85
CCM2-205ENST00000472223 A0A0G2JQZ4 141 aa9.76□□□□□ -0.85
CCM2-205ENST00000472223 RPS29P62273 56 aaKnown RBP9.76□□□□□ -0.85
CCM2-205ENST00000472223 TEN1Q86WV5 123 aa9.76□□□□□ -0.85
CCM2-205ENST00000472223 DMBT1Q9UGM3 2413 aaPredicted RBP9.75□□□□□ -0.85
CCM2-205ENST00000472223 CCKP06307 115 aa9.74□□□□□ -0.85
CCM2-205ENST00000472223 VPS25Q9BRG1 176 aa9.74□□□□□ -0.85
CCM2-205ENST00000472223 PRO0461Q9UI25 63 aa9.73□□□□□ -0.85
CCM2-205ENST00000472223 TRBV7-4A0A0J9YYF1 115 aa9.72□□□□□ -0.85
CCM2-205ENST00000472223 Q6Q795 121 aa9.72□□□□□ -0.85
CCM2-205ENST00000472223 TRBV7-7A0A0K0K1E9 115 aa9.71□□□□□ -0.86
CCM2-205ENST00000472223 SMCPP49901 116 aaPredicted RBP9.71□□□□□ -0.86
CCM2-205ENST00000472223 OBSCN-AS1Q96MR7 158 aa9.71□□□□□ -0.86
CCM2-205ENST00000472223 C14orf132Q9NPU4 83 aa9.71□□□□□ -0.86
CCM2-205ENST00000472223 LOC110117498A0A087WWA1 95 aa9.7□□□□□ -0.86
CCM2-205ENST00000472223 SS18L2Q9UHA2 77 aa9.7□□□□□ -0.86
CCM2-205ENST00000472223 A0A1W2PNM2 257 aa9.67□□□□□ -0.86
CCM2-205ENST00000472223 Q6ZQT0 140 aa9.67□□□□□ -0.86
CCM2-205ENST00000472223 Q5XG85 94 aa9.66□□□□□ -0.86
CCM2-205ENST00000472223 A0A087WSZ3 146 aa9.65□□□□□ -0.86
CCM2-205ENST00000472223 A0A1B0GW54 56 aa9.65□□□□□ -0.86
CCM2-205ENST00000472223 ETDBQ3ZM63 59 aa9.65□□□□□ -0.86
CCM2-205ENST00000472223 PRR4Q16378 134 aa9.61□□□□□ -0.87
CCM2-205ENST00000472223 ASB16-AS1Q495Z4 193 aa9.6□□□□□ -0.87
CCM2-205ENST00000472223 RETNLBQ9BQ08 111 aa9.6□□□□□ -0.87
CCM2-205ENST00000472223 FP248Q71RG6 208 aaPredicted RBP9.58□□□□□ -0.88
CCM2-205ENST00000472223 C1orf195Q5TG92 126 aa9.54□□□□□ -0.88
CCM2-205ENST00000472223 NREPQ16612 68 aa9.53□□□□□ -0.88
CCM2-205ENST00000472223 IGLV7-46A0A075B6I9 117 aa9.52□□□□□ -0.89
CCM2-205ENST00000472223 J3KT08 172 aa9.48□□□□□ -0.89
CCM2-205ENST00000472223 J3QR89 54 aa9.47□□□□□ -0.89
CCM2-205ENST00000472223 IGKV4-1P06312 121 aa9.47□□□□□ -0.89
CCM2-205ENST00000472223 UBL5Q9BZL1 73 aa9.47□□□□□ -0.89
CCM2-205ENST00000472223 ACYP1P07311 99 aa9.46□□□□□ -0.9
CCM2-205ENST00000472223 SIGMAR1Q99720 223 aa9.46□□□□□ -0.9
CCM2-205ENST00000472223 HERC1Q15751 4861 aa9.45□□□□□ -0.9
CCM2-205ENST00000472223 LINC00472Q9H8W2 130 aa9.45□□□□□ -0.9
CCM2-205ENST00000472223 DEFB116Q30KQ4 102 aa9.43□□□□□ -0.9
CCM2-205ENST00000472223 Q96NJ1 140 aa9.43□□□□□ -0.9
CCM2-205ENST00000472223 NDUFB1O75438 58 aa9.42□□□□□ -0.9
CCM2-205ENST00000472223 LINC00846Q9NV44 126 aa9.41□□□□□ -0.9
CCM2-205ENST00000472223 FAM240AA0A1B0GVK7 77 aa9.4□□□□□ -0.9
CCM2-205ENST00000472223 Q6ZVQ6 151 aa9.4□□□□□ -0.9
CCM2-205ENST00000472223 BPY2O14599 106 aa9.39□□□□□ -0.91
CCM2-205ENST00000472223 TPRXLQ17RH7 258 aa9.39□□□□□ -0.91
CCM2-205ENST00000472223 CDIP1Q9H305 208 aa9.39□□□□□ -0.91
CCM2-205ENST00000472223 C9orf92A6NGG3 77 aa9.34□□□□□ -0.91
CCM2-205ENST00000472223 KRTAP13-3Q3SY46 172 aa9.34□□□□□ -0.91
CCM2-205ENST00000472223 IGHV6-1A0A0B4J1U7 121 aa9.33□□□□□ -0.92
CCM2-205ENST00000472223 A8MWP4 228 aa9.33□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 66.2 ms