RNA–Protein interactions for RNA: ENST00000471694.1

CD47-204, Transcript of CD47 molecule, humanhuman

TSL 1 (best)

Gene CD47, Length 6,796 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD47-204ENST00000471694 FLNAP21333 2647 aaKnown RBP5.03□□□□□ -1.6
CD47-204ENST00000471694 SPRR1AP35321 89 aa5.03□□□□□ -1.6
CD47-204ENST00000471694 BPTFQ12830 3046 aa5.02□□□□□ -1.61
CD47-204ENST00000471694 BAHCC1Q9P281 2608 aa5.01□□□□□ -1.61
CD47-204ENST00000471694 SPRR1BP22528 89 aa5.01□□□□□ -1.61
CD47-204ENST00000471694 GOLGB1Q14789 3259 aaKnown RBP4.97□□□□□ -1.61
CD47-204ENST00000471694 LINC00472Q9H8W2 130 aa4.97□□□□□ -1.61
CD47-204ENST00000471694 MAST4O15021 2626 aa4.96□□□□□ -1.61
CD47-204ENST00000471694 CFAP46Q8IYW2 2715 aa4.96□□□□□ -1.62
CD47-204ENST00000471694 RPL37P61927 97 aaKnown RBP4.96□□□□□ -1.62
CD47-204ENST00000471694 KRTAP26-1Q6PEX3 210 aa4.96□□□□□ -1.62
CD47-204ENST00000471694 A8MUU9 505 aa4.96□□□□□ -1.62
CD47-204ENST00000471694 Q8NDZ9 215 aa4.95□□□□□ -1.62
CD47-204ENST00000471694 OCR1Q9BZK8 76 aa4.94□□□□□ -1.62
CD47-204ENST00000471694 KTN1-AS1Q86SY8 53 aa4.94□□□□□ -1.62
CD47-204ENST00000471694 RPS29P62273 56 aaKnown RBP4.92□□□□□ -1.62
CD47-204ENST00000471694 Q75L30 129 aa4.92□□□□□ -1.62
CD47-204ENST00000471694 ATRQ13535 2644 aa4.91□□□□□ -1.62
CD47-204ENST00000471694 A0A1B0GVY2 172 aa4.91□□□□□ -1.62
CD47-204ENST00000471694 ROMO1P60602 79 aa4.9□□□□□ -1.63
CD47-204ENST00000471694 SPATA8Q6RVD6 105 aa4.89□□□□□ -1.63
CD47-204ENST00000471694 Q6ZRN7 208 aaPredicted RBP4.89□□□□□ -1.63
CD47-204ENST00000471694 A0A0A0MQY5 61 aa4.87□□□□□ -1.63
CD47-204ENST00000471694 FLG2Q5D862 2391 aaPredicted RBP4.86□□□□□ -1.63
CD47-204ENST00000471694 STAB1Q9NY15 2570 aa4.85□□□□□ -1.63
CD47-204ENST00000471694 LINC01558Q9Y6Z2 57 aa4.84□□□□□ -1.63
CD47-204ENST00000471694 SETXQ7Z333 2677 aaKnown RBP4.83□□□□□ -1.64
CD47-204ENST00000471694 KRTAP10-10P60014 251 aa4.83□□□□□ -1.64
CD47-204ENST00000471694 KRTAP10-8P60410 259 aa4.82□□□□□ -1.64
CD47-204ENST00000471694 C5orf42Q9H799 3197 aa4.81□□□□□ -1.64
CD47-204ENST00000471694 KRTAP13-2Q52LG2 175 aa4.81□□□□□ -1.64
CD47-204ENST00000471694 TEP1Q99973 2627 aaKnown RBP4.79□□□□□ -1.64
CD47-204ENST00000471694 TEX15Q9BXT5 2789 aa4.79□□□□□ -1.64
CD47-204ENST00000471694 KRTAP11-1Q8IUC1 163 aa4.79□□□□□ -1.64
CD47-204ENST00000471694 TNP1P09430 55 aa4.79□□□□□ -1.64
CD47-204ENST00000471694 UTRNP46939 3433 aa4.77□□□□□ -1.65
CD47-204ENST00000471694 ASB16-AS1Q495Z4 193 aa4.77□□□□□ -1.65
CD47-204ENST00000471694 DNAH12Q6ZR08 3092 aa4.76□□□□□ -1.65
CD47-204ENST00000471694 NOTCH2NLQ7Z3S9 236 aa4.76□□□□□ -1.65
CD47-204ENST00000471694 CEP350Q5VT06 3117 aa4.75□□□□□ -1.65
CD47-204ENST00000471694 PRO2289Q9P1D8 64 aa4.75□□□□□ -1.65
CD47-204ENST00000471694 KRTAP4-16G5E9R7 235 aaPredicted RBP4.74□□□□□ -1.65
CD47-204ENST00000471694 PRAC1Q96KF2 57 aa4.73□□□□□ -1.65
CD47-204ENST00000471694 PRRC2CQ9Y520 2896 aaKnown RBP4.7□□□□□ -1.66
CD47-204ENST00000471694 XP32Q5T750 250 aa4.7□□□□□ -1.66
CD47-204ENST00000471694 KRTAP29-1A8MX34 341 aaPredicted RBP4.68□□□□□ -1.66
CD47-204ENST00000471694 TPRXLQ17RH7 258 aa4.68□□□□□ -1.66
CD47-204ENST00000471694 Q5XG85 94 aa4.67□□□□□ -1.66
CD47-204ENST00000471694 COL6A5A8TX70 2615 aa4.67□□□□□ -1.66
CD47-204ENST00000471694 A8MU10 97 aa4.66□□□□□ -1.66
CD47-204ENST00000471694 Q5VV11 94 aa4.65□□□□□ -1.66
CD47-204ENST00000471694 NBEAL1Q6ZS30 2694 aa4.65□□□□□ -1.67
CD47-204ENST00000471694 C10orf95Q9H7T3 257 aa4.63□□□□□ -1.67
CD47-204ENST00000471694 UNC79Q9P2D8 2635 aa4.63□□□□□ -1.67
CD47-204ENST00000471694 KMT2BQ9UMN6 2715 aaPredicted RBP4.62□□□□□ -1.67
CD47-204ENST00000471694 KRTAP13-1Q8IUC0 172 aa4.62□□□□□ -1.67
CD47-204ENST00000471694 ITPR2Q14571 2701 aa4.62□□□□□ -1.67
CD47-204ENST00000471694 DMBT1Q9UGM3 2413 aaPredicted RBP4.62□□□□□ -1.67
CD47-204ENST00000471694 KRTAP7-1Q8IUC3 87 aa4.61□□□□□ -1.67
CD47-204ENST00000471694 CHD6Q8TD26 2715 aa4.58□□□□□ -1.68
CD47-204ENST00000471694 GCN1Q92616 2671 aaKnown RBP4.57□□□□□ -1.68
CD47-204ENST00000471694 CHD7Q9P2D1 2997 aa4.56□□□□□ -1.68
CD47-204ENST00000471694 P0C880 135 aa4.56□□□□□ -1.68
CD47-204ENST00000471694 AKAP13Q12802 2813 aa4.55□□□□□ -1.68
CD47-204ENST00000471694 MGAQ8IWI9 3026 aa4.54□□□□□ -1.68
CD47-204ENST00000471694 CRYBG3Q68DQ2 2970 aa4.53□□□□□ -1.68
CD47-204ENST00000471694 KRTAP1-4P0C5Y4 121 aa4.53□□□□□ -1.68
CD47-204ENST00000471694 IGSF10Q6WRI0 2623 aa4.53□□□□□ -1.68
CD47-204ENST00000471694 CENPEQ02224 2701 aa4.52□□□□□ -1.69
CD47-204ENST00000471694 STAB2Q8WWQ8 2551 aa4.51□□□□□ -1.69
CD47-204ENST00000471694 NOTCH1P46531 2555 aa4.5□□□□□ -1.69
CD47-204ENST00000471694 KRTAP13-3Q3SY46 172 aa4.5□□□□□ -1.69
CD47-204ENST00000471694 ZNF292O60281 2723 aa4.49□□□□□ -1.69
CD47-204ENST00000471694 CYSTM1Q9H1C7 97 aa4.48□□□□□ -1.69
CD47-204ENST00000471694 FRYQ5TBA9 3013 aa4.47□□□□□ -1.69
CD47-204ENST00000471694 PP632Q6XCG6 107 aa4.43□□□□□ -1.7
CD47-204ENST00000471694 KRTAP25-1Q3LHN0 102 aa4.43□□□□□ -1.7
CD47-204ENST00000471694 NSD1Q96L73 2696 aaPredicted RBP4.43□□□□□ -1.7
CD47-204ENST00000471694 A0A0C4DFX4 3053 aa4.42□□□□□ -1.7
CD47-204ENST00000471694 MKI67P46013 3256 aaKnown RBP4.42□□□□□ -1.7
CD47-204ENST00000471694 CHD9Q3L8U1 2897 aa4.42□□□□□ -1.7
CD47-204ENST00000471694 PRUNE2Q8WUY3 3088 aa4.42□□□□□ -1.7
CD47-204ENST00000471694 PCNTO95613 3336 aa4.41□□□□□ -1.7
CD47-204ENST00000471694 DSPP15924 2871 aaKnown RBP4.39□□□□□ -1.71
CD47-204ENST00000471694 UNC80Q8N2C7 3258 aa4.39□□□□□ -1.71
CD47-204ENST00000471694 RANBP2P49792 3224 aaKnown RBP4.38□□□□□ -1.71
CD47-204ENST00000471694 MAP1AP78559 2803 aaPredicted RBP4.38□□□□□ -1.71
CD47-204ENST00000471694 LAMA3Q16787 3333 aa4.37□□□□□ -1.71
CD47-204ENST00000471694 H3BS24 57 aa4.37□□□□□ -1.71
CD47-204ENST00000471694 CFAP54Q96N23 3096 aa4.37□□□□□ -1.71
CD47-204ENST00000471694 HTTP42858 3142 aa4.35□□□□□ -1.71
CD47-204ENST00000471694 A6NN06 94 aa4.35□□□□□ -1.71
CD47-204ENST00000471694 WDFY4Q6ZS81 3184 aa4.34□□□□□ -1.71
CD47-204ENST00000471694 TENM4Q6N022 2769 aa4.33□□□□□ -1.72
CD47-204ENST00000471694 NBEAL2Q6ZNJ1 2754 aa4.33□□□□□ -1.72
CD47-204ENST00000471694 REV3LO60673 3130 aa4.33□□□□□ -1.72
CD47-204ENST00000471694 HIVEP1P15822 2718 aa4.33□□□□□ -1.72
CD47-204ENST00000471694 KRTAP16-1A8MUX0 517 aa4.32□□□□□ -1.72
CD47-204ENST00000471694 UBR5O95071 2799 aaPredicted RBP4.32□□□□□ -1.72
CD47-204ENST00000471694 XIRP2A4UGR9 3374 aa4.31□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 79.9 ms