RNA–Protein interactions for RNA: ENST00000471235.1

HDAC7-220, Transcript of histone deacetylase 7, humanhuman

TSL 2

Gene HDAC7, Length 1,012 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC7-220ENST00000471235 LPAP08519 4548 aa11.27□□□□□ -0.61
HDAC7-220ENST00000471235 RPS29P62273 56 aaKnown RBP11.26□□□□□ -0.61
HDAC7-220ENST00000471235 HRCT1Q6UXD1 115 aa11.21□□□□□ -0.61
HDAC7-220ENST00000471235 F8WEM9 126 aa11.2□□□□□ -0.62
HDAC7-220ENST00000471235 PSMB2P49721 201 aa11.2□□□□□ -0.62
HDAC7-220ENST00000471235 PPDPFLQ8WWR9 84 aa11.2□□□□□ -0.62
HDAC7-220ENST00000471235 A0A1B0GX51 115 aa11.19□□□□□ -0.62
HDAC7-220ENST00000471235 SNCGO76070 127 aa11.19□□□□□ -0.62
HDAC7-220ENST00000471235 CLEC2BQ92478 149 aa11.19□□□□□ -0.62
HDAC7-220ENST00000471235 UBR4Q5T4S7 5183 aa11.18□□□□□ -0.62
HDAC7-220ENST00000471235 A0A0G2JQZ4 141 aa11.18□□□□□ -0.62
HDAC7-220ENST00000471235 TSTD3H0UI37 97 aa11.18□□□□□ -0.62
HDAC7-220ENST00000471235 M0R143 59 aa11.18□□□□□ -0.62
HDAC7-220ENST00000471235 IGLV7-46A0A075B6I9 117 aa11.17□□□□□ -0.62
HDAC7-220ENST00000471235 CD164Q04900 197 aa11.17□□□□□ -0.62
HDAC7-220ENST00000471235 FP248Q71RG6 208 aaPredicted RBP11.17□□□□□ -0.62
HDAC7-220ENST00000471235 OCIAD2Q56VL3 154 aa11.16□□□□□ -0.62
HDAC7-220ENST00000471235 IGLV8-61A0A075B6I0 122 aa11.15□□□□□ -0.62
HDAC7-220ENST00000471235 COX6CP09669 75 aa11.14□□□□□ -0.63
HDAC7-220ENST00000471235 LIMD2Q9BT23 127 aa11.14□□□□□ -0.63
HDAC7-220ENST00000471235 SNHG12Q9BXW3 62 aa11.13□□□□□ -0.63
HDAC7-220ENST00000471235 TPRXLQ17RH7 258 aa11.12□□□□□ -0.63
HDAC7-220ENST00000471235 Q6JHZ5 121 aa11.1□□□□□ -0.63
HDAC7-220ENST00000471235 IGFL1Q6UW32 110 aa11.1□□□□□ -0.63
HDAC7-220ENST00000471235 H3BUT2 72 aa11.09□□□□□ -0.63
HDAC7-220ENST00000471235 DNAL4O96015 105 aa11.08□□□□□ -0.64
HDAC7-220ENST00000471235 GHRHP01286 108 aa11.06□□□□□ -0.64
HDAC7-220ENST00000471235 NDUFV3P56181 108 aaKnown RBP11.06□□□□□ -0.64
HDAC7-220ENST00000471235 Q5XG85 94 aa11.06□□□□□ -0.64
HDAC7-220ENST00000471235 SCGB1C2P0DMR2 95 aa11.05□□□□□ -0.64
HDAC7-220ENST00000471235 FABP2P12104 132 aa11.05□□□□□ -0.64
HDAC7-220ENST00000471235 ORMDL1Q9P0S3 153 aa11.05□□□□□ -0.64
HDAC7-220ENST00000471235 LST1O00453 97 aa11.04□□□□□ -0.64
HDAC7-220ENST00000471235 KRTAP13-3Q3SY46 172 aa11.04□□□□□ -0.64
HDAC7-220ENST00000471235 NAA38Q9BRA0 125 aaKnown RBP11.04□□□□□ -0.64
HDAC7-220ENST00000471235 BATFQ16520 125 aa11.03□□□□□ -0.64
HDAC7-220ENST00000471235 TRACP01848 142 aa11.02□□□□□ -0.65
HDAC7-220ENST00000471235 CDIP1Q9H305 208 aa11.02□□□□□ -0.65
HDAC7-220ENST00000471235 TRBV7-7A0A0K0K1E9 115 aa11.01□□□□□ -0.65
HDAC7-220ENST00000471235 H3BQ85 93 aa11□□□□□ -0.65
HDAC7-220ENST00000471235 H3BMG7 143 aa10.99□□□□□ -0.65
HDAC7-220ENST00000471235 C1orf195Q5TG92 126 aa10.98□□□□□ -0.65
HDAC7-220ENST00000471235 TCL1BO95988 128 aa10.97□□□□□ -0.65
HDAC7-220ENST00000471235 TMEM256-PLSCR3K7ERE1 68 aa10.96□□□□□ -0.65
HDAC7-220ENST00000471235 A0A1B0GV72 72 aa10.94□□□□□ -0.66
HDAC7-220ENST00000471235 Q6Q795 121 aa10.94□□□□□ -0.66
HDAC7-220ENST00000471235 RNF213Q63HN8 5207 aa10.94□□□□□ -0.66
HDAC7-220ENST00000471235 UBE2V1Q13404 147 aa10.93□□□□□ -0.66
HDAC7-220ENST00000471235 ASB16-AS1Q495Z4 193 aa10.93□□□□□ -0.66
HDAC7-220ENST00000471235 ATXN8Q156A1 80 aa10.92□□□□□ -0.66
HDAC7-220ENST00000471235 TEN1Q86WV5 123 aa10.91□□□□□ -0.66
HDAC7-220ENST00000471235 LYRM7Q5U5X0 104 aa10.9□□□□□ -0.66
HDAC7-220ENST00000471235 MUC17Q685J3 4493 aa10.89□□□□□ -0.67
HDAC7-220ENST00000471235 A0A1W2PNM2 257 aa10.88□□□□□ -0.67
HDAC7-220ENST00000471235 TAX1BP3O14907 124 aa10.88□□□□□ -0.67
HDAC7-220ENST00000471235 BAALC-AS2P0C853 105 aa10.87□□□□□ -0.67
HDAC7-220ENST00000471235 ANKRD29Q8N6D5 301 aa10.87□□□□□ -0.67
HDAC7-220ENST00000471235 C9orf118A6NHY6 69 aa10.86□□□□□ -0.67
HDAC7-220ENST00000471235 XP32Q5T750 250 aa10.86□□□□□ -0.67
HDAC7-220ENST00000471235 A0A087WSZ3 146 aa10.85□□□□□ -0.67
HDAC7-220ENST00000471235 SS18L2Q9UHA2 77 aa10.85□□□□□ -0.67
HDAC7-220ENST00000471235 C9orf92A6NGG3 77 aa10.84□□□□□ -0.67
HDAC7-220ENST00000471235 TRBV20-1A0A075B6N2 111 aa10.83□□□□□ -0.68
HDAC7-220ENST00000471235 TRBV7-4A0A0J9YYF1 115 aa10.81□□□□□ -0.68
HDAC7-220ENST00000471235 A0A1W2PPM0 123 aa10.81□□□□□ -0.68
HDAC7-220ENST00000471235 CCKP06307 115 aa10.79□□□□□ -0.68
HDAC7-220ENST00000471235 RBM3P98179 157 aaKnown RBP10.79□□□□□ -0.68
HDAC7-220ENST00000471235 C9JAW5 83 aa10.78□□□□□ -0.68
HDAC7-220ENST00000471235 Q96NJ1 140 aa10.76□□□□□ -0.69
HDAC7-220ENST00000471235 DSCR8Q96T75 97 aa10.76□□□□□ -0.69
HDAC7-220ENST00000471235 SEC61BP60468 96 aaKnown RBP10.74□□□□□ -0.69
HDAC7-220ENST00000471235 COL5A1-AS1Q5SY13 56 aa10.73□□□□□ -0.69
HDAC7-220ENST00000471235 VPS25Q9BRG1 176 aa10.73□□□□□ -0.69
HDAC7-220ENST00000471235 JMJD7-PLA2G4BH0Y9G9 81 aa10.72□□□□□ -0.69
HDAC7-220ENST00000471235 PCP4L1A6NKN8 68 aa10.7□□□□□ -0.7
HDAC7-220ENST00000471235 MTURNQ8N3F0 131 aa10.7□□□□□ -0.7
HDAC7-220ENST00000471235 H3BT86 120 aa10.68□□□□□ -0.7
HDAC7-220ENST00000471235 Q6ZQT0 140 aa10.68□□□□□ -0.7
HDAC7-220ENST00000471235 SPCS1Q9Y6A9 102 aa10.68□□□□□ -0.7
HDAC7-220ENST00000471235 LOC110117498A0A087WWA1 95 aa10.67□□□□□ -0.7
HDAC7-220ENST00000471235 OBSCN-AS1Q96MR7 158 aa10.67□□□□□ -0.7
HDAC7-220ENST00000471235 MUC2Q02817 5179 aa10.66□□□□□ -0.7
HDAC7-220ENST00000471235 SIGMAR1Q99720 223 aa10.66□□□□□ -0.7
HDAC7-220ENST00000471235 C14orf132Q9NPU4 83 aa10.66□□□□□ -0.7
HDAC7-220ENST00000471235 KRTAP4-1Q9BYQ7 146 aa10.65□□□□□ -0.7
HDAC7-220ENST00000471235 RPL37P61927 97 aaKnown RBP10.64□□□□□ -0.71
HDAC7-220ENST00000471235 LINC00472Q9H8W2 130 aa10.64□□□□□ -0.71
HDAC7-220ENST00000471235 IGKV4-1P06312 121 aa10.62□□□□□ -0.71
HDAC7-220ENST00000471235 PCOTHQ58A44 107 aa10.62□□□□□ -0.71
HDAC7-220ENST00000471235 PDE6GP18545 87 aa10.61□□□□□ -0.71
HDAC7-220ENST00000471235 C21orf62-AS1Q17RA5 79 aa10.6□□□□□ -0.71
HDAC7-220ENST00000471235 DEFB116Q30KQ4 102 aa10.6□□□□□ -0.71
HDAC7-220ENST00000471235 A0A0U1RQV1 116 aa10.57□□□□□ -0.72
HDAC7-220ENST00000471235 K7EP34 96 aa10.57□□□□□ -0.72
HDAC7-220ENST00000471235 DSCR10P59022 87 aa10.56□□□□□ -0.72
HDAC7-220ENST00000471235 A0A1B0GW54 56 aa10.55□□□□□ -0.72
HDAC7-220ENST00000471235 SMCPP49901 116 aaPredicted RBP10.55□□□□□ -0.72
HDAC7-220ENST00000471235 Q75L30 129 aa10.54□□□□□ -0.72
HDAC7-220ENST00000471235 PRO0461Q9UI25 63 aa10.53□□□□□ -0.72
HDAC7-220ENST00000471235 J3KT08 172 aa10.49□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 167.5 ms