RNA–Protein interactions for RNA: ENST00000469757.1

TRAPPC3-206, Transcript of trafficking protein particle complex 3, humanhuman

TSL 2

Gene TRAPPC3, Length 221 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC3-206ENST00000469757 Q1RN00 199 aa4.71□□□□□ -1.66
TRAPPC3-206ENST00000469757 LOC105371267A0A1B0GV96 52 aa4.7□□□□□ -1.66
TRAPPC3-206ENST00000469757 K7ERJ3 54 aa4.7□□□□□ -1.66
TRAPPC3-206ENST00000469757 TRIAP1O43715 76 aa4.7□□□□□ -1.66
TRAPPC3-206ENST00000469757 Q5XG85 94 aa4.7□□□□□ -1.66
TRAPPC3-206ENST00000469757 DEFB105AQ8NG35 78 aa4.7□□□□□ -1.66
TRAPPC3-206ENST00000469757 FAM218AQ96MZ4 157 aa4.7□□□□□ -1.66
TRAPPC3-206ENST00000469757 RETNLBQ9BQ08 111 aa4.7□□□□□ -1.66
TRAPPC3-206ENST00000469757 OCIAD2Q56VL3 154 aa4.69□□□□□ -1.66
TRAPPC3-206ENST00000469757 PRO1933Q9H354 126 aa4.69□□□□□ -1.66
TRAPPC3-206ENST00000469757 LPAP08519 4548 aa4.68□□□□□ -1.66
TRAPPC3-206ENST00000469757 LIMD2Q9BT23 127 aa4.68□□□□□ -1.66
TRAPPC3-206ENST00000469757 IGLV7-46A0A075B6I9 117 aa4.67□□□□□ -1.66
TRAPPC3-206ENST00000469757 F8WEM9 126 aa4.67□□□□□ -1.66
TRAPPC3-206ENST00000469757 M0R143 59 aa4.67□□□□□ -1.66
TRAPPC3-206ENST00000469757 Q6JHZ5 121 aa4.67□□□□□ -1.66
TRAPPC3-206ENST00000469757 SNCGO76070 127 aa4.66□□□□□ -1.66
TRAPPC3-206ENST00000469757 KRTAP13-3Q3SY46 172 aa4.66□□□□□ -1.66
TRAPPC3-206ENST00000469757 CLEC2BQ92478 149 aa4.66□□□□□ -1.66
TRAPPC3-206ENST00000469757 TSTD3H0UI37 97 aa4.65□□□□□ -1.67
TRAPPC3-206ENST00000469757 GHRHP01286 108 aa4.64□□□□□ -1.67
TRAPPC3-206ENST00000469757 H3BQ85 93 aa4.63□□□□□ -1.67
TRAPPC3-206ENST00000469757 COX6CP09669 75 aa4.63□□□□□ -1.67
TRAPPC3-206ENST00000469757 Q6Q795 121 aa4.63□□□□□ -1.67
TRAPPC3-206ENST00000469757 IGFL1Q6UW32 110 aa4.63□□□□□ -1.67
TRAPPC3-206ENST00000469757 A0A0G2JQZ4 141 aa4.62□□□□□ -1.67
TRAPPC3-206ENST00000469757 LST1O00453 97 aa4.62□□□□□ -1.67
TRAPPC3-206ENST00000469757 TRACP01848 142 aa4.62□□□□□ -1.67
TRAPPC3-206ENST00000469757 PSMB2P49721 201 aa4.62□□□□□ -1.67
TRAPPC3-206ENST00000469757 ASB16-AS1Q495Z4 193 aa4.62□□□□□ -1.67
TRAPPC3-206ENST00000469757 SNHG12Q9BXW3 62 aa4.62□□□□□ -1.67
TRAPPC3-206ENST00000469757 TRBV7-7A0A0K0K1E9 115 aa4.61□□□□□ -1.67
TRAPPC3-206ENST00000469757 DNAL4O96015 105 aa4.61□□□□□ -1.67
TRAPPC3-206ENST00000469757 NDUFV3P56181 108 aaKnown RBP4.61□□□□□ -1.67
TRAPPC3-206ENST00000469757 HRCT1Q6UXD1 115 aa4.61□□□□□ -1.67
TRAPPC3-206ENST00000469757 ORMDL1Q9P0S3 153 aa4.61□□□□□ -1.67
TRAPPC3-206ENST00000469757 H3BUT2 72 aa4.6□□□□□ -1.67
TRAPPC3-206ENST00000469757 C1orf195Q5TG92 126 aa4.6□□□□□ -1.67
TRAPPC3-206ENST00000469757 CDIP1Q9H305 208 aa4.6□□□□□ -1.67
TRAPPC3-206ENST00000469757 TCL1BO95988 128 aa4.59□□□□□ -1.67
TRAPPC3-206ENST00000469757 H3BMG7 143 aa4.58□□□□□ -1.68
TRAPPC3-206ENST00000469757 TMEM256-PLSCR3K7ERE1 68 aa4.58□□□□□ -1.68
TRAPPC3-206ENST00000469757 UBE2V1Q13404 147 aa4.58□□□□□ -1.68
TRAPPC3-206ENST00000469757 XP32Q5T750 250 aa4.58□□□□□ -1.68
TRAPPC3-206ENST00000469757 FABP2P12104 132 aa4.57□□□□□ -1.68
TRAPPC3-206ENST00000469757 TEN1Q86WV5 123 aa4.57□□□□□ -1.68
TRAPPC3-206ENST00000469757 MUC17Q685J3 4493 aa4.56□□□□□ -1.68
TRAPPC3-206ENST00000469757 LYRM7Q5U5X0 104 aa4.56□□□□□ -1.68
TRAPPC3-206ENST00000469757 SS18L2Q9UHA2 77 aa4.56□□□□□ -1.68
TRAPPC3-206ENST00000469757 RNF213Q63HN8 5207 aa4.56□□□□□ -1.68
TRAPPC3-206ENST00000469757 SCGB1C2P0DMR2 95 aa4.55□□□□□ -1.68
TRAPPC3-206ENST00000469757 ATXN8Q156A1 80 aa4.55□□□□□ -1.68
TRAPPC3-206ENST00000469757 TRBV7-4A0A0J9YYF1 115 aa4.54□□□□□ -1.68
TRAPPC3-206ENST00000469757 A0A1W2PNM2 257 aa4.54□□□□□ -1.68
TRAPPC3-206ENST00000469757 NAA38Q9BRA0 125 aaKnown RBP4.54□□□□□ -1.68
TRAPPC3-206ENST00000469757 TRBV20-1A0A075B6N2 111 aa4.53□□□□□ -1.68
TRAPPC3-206ENST00000469757 BATFQ16520 125 aa4.53□□□□□ -1.68
TRAPPC3-206ENST00000469757 MUC2Q02817 5179 aa4.53□□□□□ -1.68
TRAPPC3-206ENST00000469757 A0A087WSZ3 146 aa4.52□□□□□ -1.69
TRAPPC3-206ENST00000469757 C9orf118A6NHY6 69 aa4.52□□□□□ -1.69
TRAPPC3-206ENST00000469757 TAX1BP3O14907 124 aa4.52□□□□□ -1.69
TRAPPC3-206ENST00000469757 ANKRD29Q8N6D5 301 aa4.52□□□□□ -1.69
TRAPPC3-206ENST00000469757 Q96NJ1 140 aa4.52□□□□□ -1.69
TRAPPC3-206ENST00000469757 BAALC-AS2P0C853 105 aa4.51□□□□□ -1.69
TRAPPC3-206ENST00000469757 SEC61BP60468 96 aaKnown RBP4.51□□□□□ -1.69
TRAPPC3-206ENST00000469757 A0A1W2PPM0 123 aa4.5□□□□□ -1.69
TRAPPC3-206ENST00000469757 CCKP06307 115 aa4.5□□□□□ -1.69
TRAPPC3-206ENST00000469757 RBM3P98179 157 aaKnown RBP4.5□□□□□ -1.69
TRAPPC3-206ENST00000469757 LOC110117498A0A087WWA1 95 aa4.49□□□□□ -1.69
TRAPPC3-206ENST00000469757 A0A1B0GV72 72 aa4.49□□□□□ -1.69
TRAPPC3-206ENST00000469757 C9orf92A6NGG3 77 aa4.49□□□□□ -1.69
TRAPPC3-206ENST00000469757 OBSCN-AS1Q96MR7 158 aa4.49□□□□□ -1.69
TRAPPC3-206ENST00000469757 JMJD7-PLA2G4BH0Y9G9 81 aa4.48□□□□□ -1.69
TRAPPC3-206ENST00000469757 RPL37P61927 97 aaKnown RBP4.48□□□□□ -1.69
TRAPPC3-206ENST00000469757 C21orf62-AS1Q17RA5 79 aa4.48□□□□□ -1.69
TRAPPC3-206ENST00000469757 DSCR8Q96T75 97 aa4.48□□□□□ -1.69
TRAPPC3-206ENST00000469757 A0A0U1RQV1 116 aa4.47□□□□□ -1.69
TRAPPC3-206ENST00000469757 A0A1B0GW54 56 aa4.47□□□□□ -1.69
TRAPPC3-206ENST00000469757 C9JAW5 83 aa4.47□□□□□ -1.69
TRAPPC3-206ENST00000469757 H3BT86 120 aa4.47□□□□□ -1.69
TRAPPC3-206ENST00000469757 Q6ZQT0 140 aa4.47□□□□□ -1.69
TRAPPC3-206ENST00000469757 PDE6GP18545 87 aa4.46□□□□□ -1.7
TRAPPC3-206ENST00000469757 COL5A1-AS1Q5SY13 56 aa4.46□□□□□ -1.7
TRAPPC3-206ENST00000469757 KRTAP4-1Q9BYQ7 146 aa4.46□□□□□ -1.7
TRAPPC3-206ENST00000469757 LINC00472Q9H8W2 130 aa4.46□□□□□ -1.7
TRAPPC3-206ENST00000469757 Q75L30 129 aa4.44□□□□□ -1.7
TRAPPC3-206ENST00000469757 SIGMAR1Q99720 223 aa4.44□□□□□ -1.7
TRAPPC3-206ENST00000469757 PCOTHQ58A44 107 aa4.43□□□□□ -1.7
TRAPPC3-206ENST00000469757 C20orf166-AS1Q96NR2 134 aa4.43□□□□□ -1.7
TRAPPC3-206ENST00000469757 C14orf132Q9NPU4 83 aa4.43□□□□□ -1.7
TRAPPC3-206ENST00000469757 SPCS1Q9Y6A9 102 aa4.43□□□□□ -1.7
TRAPPC3-206ENST00000469757 A8MUU9 505 aa4.41□□□□□ -1.7
TRAPPC3-206ENST00000469757 IGKV4-1P06312 121 aa4.41□□□□□ -1.7
TRAPPC3-206ENST00000469757 LCE2AQ5TA79 106 aaPredicted RBP4.41□□□□□ -1.7
TRAPPC3-206ENST00000469757 VPS25Q9BRG1 176 aa4.41□□□□□ -1.7
TRAPPC3-206ENST00000469757 PRO0461Q9UI25 63 aa4.41□□□□□ -1.7
TRAPPC3-206ENST00000469757 KRTAP16-1A8MUX0 517 aa4.4□□□□□ -1.71
TRAPPC3-206ENST00000469757 J3KT08 172 aa4.4□□□□□ -1.71
TRAPPC3-206ENST00000469757 K7EP34 96 aa4.4□□□□□ -1.71
TRAPPC3-206ENST00000469757 MTURNQ8N3F0 131 aa4.4□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 59.6 ms