RNA–Protein interactions for RNA: ENST00000465563.5

SMC4-205, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 2

Gene SMC4, Length 747 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-205ENST00000465563 COL5A1-AS1Q5SY13 56 aa-1.13□□□□□ -2.59
SMC4-205ENST00000465563 UBE2D4Q9Y2X8 147 aa-1.13□□□□□ -2.59
SMC4-205ENST00000465563 DNAH8Q96JB1 4490 aa-1.14□□□□□ -2.59
SMC4-205ENST00000465563 LRBAP50851 2863 aa-1.14□□□□□ -2.59
SMC4-205ENST00000465563 LEPROTL1O95214 131 aa-1.14□□□□□ -2.59
SMC4-205ENST00000465563 FAUP35544 74 aaKnown RBP-1.14□□□□□ -2.59
SMC4-205ENST00000465563 ZNF720Q7Z2F6 126 aa-1.14□□□□□ -2.59
SMC4-205ENST00000465563 ABCA13Q86UQ4 5058 aa-1.14□□□□□ -2.59
SMC4-205ENST00000465563 BPTFQ12830 3046 aa-1.15□□□□□ -2.59
SMC4-205ENST00000465563 AKAP12Q02952 1782 aa-1.15□□□□□ -2.59
SMC4-205ENST00000465563 UQCRHLA0A096LP55 91 aa-1.15□□□□□ -2.59
SMC4-205ENST00000465563 NCMAPQ5T1S8 102 aa-1.15□□□□□ -2.59
SMC4-205ENST00000465563 ITPR2Q14571 2701 aa-1.15□□□□□ -2.59
SMC4-205ENST00000465563 MYO9AB2RTY4 2548 aa-1.15□□□□□ -2.59
SMC4-205ENST00000465563 SMG1Q96Q15 3661 aaKnown RBP-1.15□□□□□ -2.59
SMC4-205ENST00000465563 RANBP2P49792 3224 aaKnown RBP-1.16□□□□□ -2.6
SMC4-205ENST00000465563 RGPD8O14715 1765 aaPredicted RBP-1.16□□□□□ -2.6
SMC4-205ENST00000465563 RGPD5Q99666 1765 aa-1.16□□□□□ -2.6
SMC4-205ENST00000465563 C4AP0C0L4 1744 aa-1.18□□□□□ -2.6
SMC4-205ENST00000465563 C4BP0C0L5 1744 aa-1.18□□□□□ -2.6
SMC4-205ENST00000465563 MAP3K1Q13233 1512 aa-1.18□□□□□ -2.6
SMC4-205ENST00000465563 MT1EP04732 61 aa-1.18□□□□□ -2.6
SMC4-205ENST00000465563 MT1GP13640 62 aa-1.18□□□□□ -2.6
SMC4-205ENST00000465563 NMSQ5H8A3 153 aa-1.18□□□□□ -2.6
SMC4-205ENST00000465563 TIAM2Q8IVF5 1701 aa-1.18□□□□□ -2.6
SMC4-205ENST00000465563 ABCC10Q5T3U5 1492 aa-1.18□□□□□ -2.6
SMC4-205ENST00000465563 COX7BP24311 80 aa-1.19□□□□□ -2.6
SMC4-205ENST00000465563 CLPSL2Q6UWE3 100 aa-1.19□□□□□ -2.6
SMC4-205ENST00000465563 SUPT6HQ7KZ85 1726 aaKnown RBP-1.19□□□□□ -2.6
SMC4-205ENST00000465563 ATP10BO94823 1461 aa-1.19□□□□□ -2.6
SMC4-205ENST00000465563 RGPD4Q7Z3J3 1758 aa-1.2□□□□□ -2.6
SMC4-205ENST00000465563 SMR3BP02814 79 aaPredicted RBP-1.2□□□□□ -2.6
SMC4-205ENST00000465563 PRLHP81277 87 aa-1.2□□□□□ -2.6
SMC4-205ENST00000465563 MT1LQ93083 61 aa-1.2□□□□□ -2.6
SMC4-205ENST00000465563 MYO3AQ8NEV4 1616 aa-1.2□□□□□ -2.6
SMC4-205ENST00000465563 TRRAPQ9Y4A5 3859 aa-1.2□□□□□ -2.6
SMC4-205ENST00000465563 TLN2Q9Y4G6 2542 aa-1.21□□□□□ -2.6
SMC4-205ENST00000465563 VPS8Q8N3P4 1428 aa-1.21□□□□□ -2.6
SMC4-205ENST00000465563 NDUFA3O95167 84 aa-1.21□□□□□ -2.6
SMC4-205ENST00000465563 MT1MQ8N339 61 aa-1.21□□□□□ -2.6
SMC4-205ENST00000465563 DYNC2H1Q8NCM8 4307 aaKnown RBP-1.21□□□□□ -2.6
SMC4-205ENST00000465563 M0R143 59 aa-1.22□□□□□ -2.6
SMC4-205ENST00000465563 MT2AP02795 61 aa-1.22□□□□□ -2.6
SMC4-205ENST00000465563 MT1BP07438 61 aa-1.22□□□□□ -2.6
SMC4-205ENST00000465563 LRRC7Q96NW7 1537 aa-1.22□□□□□ -2.6
SMC4-205ENST00000465563 RGPD3A6NKT7 1758 aaPredicted RBP-1.22□□□□□ -2.6
SMC4-205ENST00000465563 SPTBN5Q9NRC6 3674 aaKnown RBP-1.22□□□□□ -2.6
SMC4-205ENST00000465563 DMXL2Q8TDJ6 3036 aa-1.23□□□□□ -2.61
SMC4-205ENST00000465563 ATP7BP35670 1465 aa-1.23□□□□□ -2.61
SMC4-205ENST00000465563 KRTAP20-1Q3LI63 56 aa-1.23□□□□□ -2.61
SMC4-205ENST00000465563 COX6B2Q6YFQ2 88 aa-1.23□□□□□ -2.61
SMC4-205ENST00000465563 HMGN2P05204 90 aaKnown RBP-1.24□□□□□ -2.61
SMC4-205ENST00000465563 SNHG12Q9BXW3 62 aa-1.24□□□□□ -2.61
SMC4-205ENST00000465563 TNRC6CQ9HCJ0 1690 aaKnown RBP-1.24□□□□□ -2.61
SMC4-205ENST00000465563 SPTAN1Q13813 2472 aaKnown RBP-1.24□□□□□ -2.61
SMC4-205ENST00000465563 POLR1AO95602 1720 aaPredicted RBP-1.24□□□□□ -2.61
SMC4-205ENST00000465563 LRRC9Q6ZRR7 1453 aa-1.24□□□□□ -2.61
SMC4-205ENST00000465563 DNAH17Q9UFH2 4485 aa-1.25□□□□□ -2.61
SMC4-205ENST00000465563 C20orf78Q9BR46 151 aa-1.25□□□□□ -2.61
SMC4-205ENST00000465563 TLN1Q9Y490 2541 aaKnown RBP-1.25□□□□□ -2.61
SMC4-205ENST00000465563 NEXMIFQ5QGS0 1516 aa-1.25□□□□□ -2.61
SMC4-205ENST00000465563 LTN1O94822 1766 aa-1.26□□□□□ -2.61
SMC4-205ENST00000465563 SPENQ96T58 3664 aaKnown RBP-1.26□□□□□ -2.61
SMC4-205ENST00000465563 ATMQ13315 3056 aa-1.26□□□□□ -2.61
SMC4-205ENST00000465563 ADGRG4Q8IZF6 3080 aa-1.26□□□□□ -2.61
SMC4-205ENST00000465563 DNAH5Q8TE73 4624 aa-1.26□□□□□ -2.61
SMC4-205ENST00000465563 DNAH10Q8IVF4 4471 aa-1.27□□□□□ -2.61
SMC4-205ENST00000465563 C3orf79P0CE67 100 aa-1.27□□□□□ -2.61
SMC4-205ENST00000465563 LINC00158P58513 81 aa-1.27□□□□□ -2.61
SMC4-205ENST00000465563 DEFB106AQ8N104 65 aa-1.27□□□□□ -2.61
SMC4-205ENST00000465563 WFDC9Q8NEX5 89 aa-1.27□□□□□ -2.61
SMC4-205ENST00000465563 PRO3102Q9H379 93 aa-1.27□□□□□ -2.61
SMC4-205ENST00000465563 CEP162Q5TB80 1403 aa-1.27□□□□□ -2.61
SMC4-205ENST00000465563 BAZ1AQ9NRL2 1556 aaPredicted RBP-1.27□□□□□ -2.61
SMC4-205ENST00000465563 TNP1P09430 55 aa-1.28□□□□□ -2.61
SMC4-205ENST00000465563 MMP24-AS1A0A0U1RRL7 71 aa-1.29□□□□□ -2.62
SMC4-205ENST00000465563 A0A1B0GUT8 65 aa-1.29□□□□□ -2.62
SMC4-205ENST00000465563 GYPAP02724 150 aa-1.29□□□□□ -2.62
SMC4-205ENST00000465563 RPL38P63173 70 aaKnown RBP-1.29□□□□□ -2.62
SMC4-205ENST00000465563 PLGLAQ15195 96 aa-1.29□□□□□ -2.62
SMC4-205ENST00000465563 DOT1LQ8TEK3 1739 aa-1.29□□□□□ -2.62
SMC4-205ENST00000465563 TMEM131LA2VDJ0 1609 aa-1.29□□□□□ -2.62
SMC4-205ENST00000465563 CDC42BPGQ6DT37 1551 aa-1.3□□□□□ -2.62
SMC4-205ENST00000465563 KRTAP8-1Q8IUC2 63 aa-1.3□□□□□ -2.62
SMC4-205ENST00000465563 SCN11AQ9UI33 1791 aa-1.3□□□□□ -2.62
SMC4-205ENST00000465563 IQCF6A8MYZ5 107 aa-1.31□□□□□ -2.62
SMC4-205ENST00000465563 GAFA1Q96PS6 74 aa-1.31□□□□□ -2.62
SMC4-205ENST00000465563 CEP170BQ9Y4F5 1589 aaPredicted RBP-1.31□□□□□ -2.62
SMC4-205ENST00000465563 BOD1L1Q8NFC6 3051 aa-1.31□□□□□ -2.62
SMC4-205ENST00000465563 USP32Q8NFA0 1604 aa-1.32□□□□□ -2.62
SMC4-205ENST00000465563 TIMM8BQ9Y5J9 83 aaPredicted RBP-1.32□□□□□ -2.62
SMC4-205ENST00000465563 ZNF831Q5JPB2 1677 aa-1.32□□□□□ -2.62
SMC4-205ENST00000465563 NESP48681 1621 aa-1.33□□□□□ -2.62
SMC4-205ENST00000465563 MGAQ8IWI9 3026 aa-1.33□□□□□ -2.62
SMC4-205ENST00000465563 S100A8P05109 93 aa-1.33□□□□□ -2.62
SMC4-205ENST00000465563 DEFB130BP0DP73 79 aa-1.33□□□□□ -2.62
SMC4-205ENST00000465563 DEFB130AP0DP74 79 aa-1.33□□□□□ -2.62
SMC4-205ENST00000465563 SMIM11AP58511 58 aa-1.33□□□□□ -2.62
SMC4-205ENST00000465563 PKIAP61925 76 aa-1.33□□□□□ -2.62
SMC4-205ENST00000465563 PEA15Q15121 130 aa-1.33□□□□□ -2.62
Retrieved 100 of 20,778 RNA–protein pairs in 123.8 ms