RNA–Protein interactions for RNA: ENST00000464654.1

TM9SF3-203, Transcript of transmembrane 9 superfamily member 3, humanhuman

TSL 5

Gene TM9SF3, Length 658 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF3-203ENST00000464654 DNAH1Q9P2D7 4330 aa-0.25□□□□□ -2.45
TM9SF3-203ENST00000464654 PLECQ15149 4684 aaKnown RBP-0.25□□□□□ -2.45
TM9SF3-203ENST00000464654 LRRC37AA6NMS7 1700 aa-0.25□□□□□ -2.45
TM9SF3-203ENST00000464654 LRBAP50851 2863 aa-0.25□□□□□ -2.45
TM9SF3-203ENST00000464654 ADGRG4Q8IZF6 3080 aa-0.25□□□□□ -2.45
TM9SF3-203ENST00000464654 DYNC1H1Q14204 4646 aaKnown RBP-0.25□□□□□ -2.45
TM9SF3-203ENST00000464654 PKHD1L1Q86WI1 4243 aa-0.26□□□□□ -2.45
TM9SF3-203ENST00000464654 UNC80Q8N2C7 3258 aa-0.26□□□□□ -2.45
TM9SF3-203ENST00000464654 EPRSP07814 1512 aaKnown RBP-0.26□□□□□ -2.45
TM9SF3-203ENST00000464654 SMR3BP02814 79 aaPredicted RBP-0.26□□□□□ -2.45
TM9SF3-203ENST00000464654 HMGN2P05204 90 aaKnown RBP-0.26□□□□□ -2.45
TM9SF3-203ENST00000464654 COX7BP24311 80 aa-0.26□□□□□ -2.45
TM9SF3-203ENST00000464654 PKIAP61925 76 aa-0.26□□□□□ -2.45
TM9SF3-203ENST00000464654 PLGLAQ15195 96 aa-0.26□□□□□ -2.45
TM9SF3-203ENST00000464654 GAFA1Q96PS6 74 aa-0.26□□□□□ -2.45
TM9SF3-203ENST00000464654 SPENQ96T58 3664 aaKnown RBP-0.26□□□□□ -2.45
TM9SF3-203ENST00000464654 PRUNE2Q8WUY3 3088 aa-0.26□□□□□ -2.45
TM9SF3-203ENST00000464654 FRYQ5TBA9 3013 aa-0.26□□□□□ -2.45
TM9SF3-203ENST00000464654 MGAQ8IWI9 3026 aa-0.26□□□□□ -2.45
TM9SF3-203ENST00000464654 ZZEF1O43149 2961 aa-0.26□□□□□ -2.45
TM9SF3-203ENST00000464654 KNL1Q8NG31 2342 aa-0.26□□□□□ -2.45
TM9SF3-203ENST00000464654 CRYBG3Q68DQ2 2970 aa-0.27□□□□□ -2.45
TM9SF3-203ENST00000464654 COL14A1Q05707 1796 aaKnown RBP-0.27□□□□□ -2.45
TM9SF3-203ENST00000464654 ANKRD26Q9UPS8 1709 aa-0.27□□□□□ -2.45
TM9SF3-203ENST00000464654 APOBP04114 4563 aaKnown RBP-0.27□□□□□ -2.45
TM9SF3-203ENST00000464654 ABCC10Q5T3U5 1492 aa-0.27□□□□□ -2.45
TM9SF3-203ENST00000464654 MAGI2Q86UL8 1455 aa-0.27□□□□□ -2.45
TM9SF3-203ENST00000464654 IQCF6A8MYZ5 107 aa-0.27□□□□□ -2.45
TM9SF3-203ENST00000464654 H0YAA0 97 aa-0.27□□□□□ -2.45
TM9SF3-203ENST00000464654 DEFB1P60022 68 aa-0.27□□□□□ -2.45
TM9SF3-203ENST00000464654 RPS29P62273 56 aaKnown RBP-0.27□□□□□ -2.45
TM9SF3-203ENST00000464654 SNHG12Q9BXW3 62 aa-0.27□□□□□ -2.45
TM9SF3-203ENST00000464654 DNAH5Q8TE73 4624 aa-0.27□□□□□ -2.45
TM9SF3-203ENST00000464654 SZT2Q5T011 3432 aa-0.27□□□□□ -2.45
TM9SF3-203ENST00000464654 MON2Q7Z3U7 1717 aa-0.27□□□□□ -2.45
TM9SF3-203ENST00000464654 DNAH17Q9UFH2 4485 aa-0.27□□□□□ -2.45
TM9SF3-203ENST00000464654 DYNC2H1Q8NCM8 4307 aaKnown RBP-0.27□□□□□ -2.45
TM9SF3-203ENST00000464654 VPS13BQ7Z7G8 4022 aa-0.28□□□□□ -2.45
TM9SF3-203ENST00000464654 VCANP13611 3396 aa-0.28□□□□□ -2.45
TM9SF3-203ENST00000464654 FANCAO15360 1455 aa-0.28□□□□□ -2.45
TM9SF3-203ENST00000464654 ATP10BO94823 1461 aa-0.28□□□□□ -2.45
TM9SF3-203ENST00000464654 SMG1Q96Q15 3661 aaKnown RBP-0.28□□□□□ -2.45
TM9SF3-203ENST00000464654 ATMQ13315 3056 aa-0.28□□□□□ -2.45
TM9SF3-203ENST00000464654 CFAP54Q96N23 3096 aa-0.28□□□□□ -2.45
TM9SF3-203ENST00000464654 LCE6AA0A183 80 aa-0.28□□□□□ -2.45
TM9SF3-203ENST00000464654 C9orf92A6NGG3 77 aa-0.28□□□□□ -2.45
TM9SF3-203ENST00000464654 KRTAP19-5Q3LI72 72 aa-0.28□□□□□ -2.45
TM9SF3-203ENST00000464654 COX6B2Q6YFQ2 88 aa-0.28□□□□□ -2.45
TM9SF3-203ENST00000464654 C20orf78Q9BR46 151 aa-0.28□□□□□ -2.45
TM9SF3-203ENST00000464654 Q9H521 79 aa-0.28□□□□□ -2.45
TM9SF3-203ENST00000464654 EP400Q96L91 3159 aa-0.28□□□□□ -2.45
TM9SF3-203ENST00000464654 C5orf42Q9H799 3197 aa-0.28□□□□□ -2.45
TM9SF3-203ENST00000464654 C5P01031 1676 aa-0.28□□□□□ -2.45
TM9SF3-203ENST00000464654 MUC3AQ02505 3323 aa-0.28□□□□□ -2.45
TM9SF3-203ENST00000464654 ASXL1Q8IXJ9 1541 aa-0.28□□□□□ -2.45
TM9SF3-203ENST00000464654 RANBP2P49792 3224 aaKnown RBP-0.28□□□□□ -2.45
TM9SF3-203ENST00000464654 HTTP42858 3142 aa-0.29□□□□□ -2.46
TM9SF3-203ENST00000464654 CEP350Q5VT06 3117 aa-0.29□□□□□ -2.46
TM9SF3-203ENST00000464654 USP34Q70CQ2 3546 aa-0.29□□□□□ -2.46
TM9SF3-203ENST00000464654 TROQ12816 1431 aaPredicted RBP-0.29□□□□□ -2.46
TM9SF3-203ENST00000464654 MKI67P46013 3256 aaKnown RBP-0.29□□□□□ -2.46
TM9SF3-203ENST00000464654 NDUFA3O95167 84 aa-0.29□□□□□ -2.46
TM9SF3-203ENST00000464654 WDFY3Q8IZQ1 3526 aa-0.29□□□□□ -2.46
TM9SF3-203ENST00000464654 LRRC9Q6ZRR7 1453 aa-0.29□□□□□ -2.46
TM9SF3-203ENST00000464654 CLTCQ00610 1675 aaKnown RBP-0.3□□□□□ -2.46
TM9SF3-203ENST00000464654 CMYA5Q8N3K9 4069 aa-0.3□□□□□ -2.46
TM9SF3-203ENST00000464654 SMARCA2P51531 1590 aa-0.3□□□□□ -2.46
TM9SF3-203ENST00000464654 CDC42BPGQ6DT37 1551 aa-0.3□□□□□ -2.46
TM9SF3-203ENST00000464654 BAZ1AQ9NRL2 1556 aaPredicted RBP-0.3□□□□□ -2.46
TM9SF3-203ENST00000464654 MYMXA0A1B0GTQ4 84 aa-0.3□□□□□ -2.46
TM9SF3-203ENST00000464654 KRTAP19-2Q3LHN2 52 aa-0.3□□□□□ -2.46
TM9SF3-203ENST00000464654 WFDC9Q8NEX5 89 aa-0.3□□□□□ -2.46
TM9SF3-203ENST00000464654 LRRC7Q96NW7 1537 aa-0.3□□□□□ -2.46
TM9SF3-203ENST00000464654 DNAH8Q96JB1 4490 aa-0.3□□□□□ -2.46
TM9SF3-203ENST00000464654 ATP7BP35670 1465 aa-0.3□□□□□ -2.46
TM9SF3-203ENST00000464654 DNAH11Q96DT5 4516 aa-0.3□□□□□ -2.46
TM9SF3-203ENST00000464654 DNAH10Q8IVF4 4471 aa-0.3□□□□□ -2.46
TM9SF3-203ENST00000464654 TRRAPQ9Y4A5 3859 aa-0.31□□□□□ -2.46
TM9SF3-203ENST00000464654 NEXMIFQ5QGS0 1516 aa-0.31□□□□□ -2.46
TM9SF3-203ENST00000464654 CDH23Q9H251 3354 aa-0.31□□□□□ -2.46
TM9SF3-203ENST00000464654 TRAV21A0A0B4J279 112 aa-0.31□□□□□ -2.46
TM9SF3-203ENST00000464654 PYY3Q5JQD4 70 aa-0.31□□□□□ -2.46
TM9SF3-203ENST00000464654 CRYBG1Q9Y4K1 1723 aa-0.31□□□□□ -2.46
TM9SF3-203ENST00000464654 PCNTO95613 3336 aa-0.31□□□□□ -2.46
TM9SF3-203ENST00000464654 MYH4Q9Y623 1939 aa-0.31□□□□□ -2.46
TM9SF3-203ENST00000464654 CENPFP49454 3210 aa-0.31□□□□□ -2.46
TM9SF3-203ENST00000464654 CICQ96RK0 1608 aaPredicted RBP-0.31□□□□□ -2.46
TM9SF3-203ENST00000464654 CFAP47Q6ZTR5 3102 aa-0.31□□□□□ -2.46
TM9SF3-203ENST00000464654 DNAH12Q6ZR08 3092 aa-0.32□□□□□ -2.46
TM9SF3-203ENST00000464654 DMDP11532 3685 aa-0.32□□□□□ -2.46
TM9SF3-203ENST00000464654 ADAMTS12P58397 1594 aa-0.32□□□□□ -2.46
TM9SF3-203ENST00000464654 AKAP12Q02952 1782 aa-0.32□□□□□ -2.46
TM9SF3-203ENST00000464654 DNAH14Q0VDD8 3507 aa-0.32□□□□□ -2.46
TM9SF3-203ENST00000464654 CEBPZOSA8MTT3 80 aa-0.32□□□□□ -2.46
TM9SF3-203ENST00000464654 NDUFB1O75438 58 aa-0.32□□□□□ -2.46
TM9SF3-203ENST00000464654 SNRPFP62306 86 aaKnown RBP-0.32□□□□□ -2.46
TM9SF3-203ENST00000464654 CLPSL2Q6UWE3 100 aa-0.32□□□□□ -2.46
TM9SF3-203ENST00000464654 S100A16Q96FQ6 103 aaKnown RBP-0.32□□□□□ -2.46
TM9SF3-203ENST00000464654 V9GYS6 101 aa-0.32□□□□□ -2.46
TM9SF3-203ENST00000464654 FRYLO94915 3013 aa-0.32□□□□□ -2.46
Retrieved 100 of 20,778 RNA–protein pairs in 94 ms