RNA–Protein interactions for RNA: ENST00000459895.1

COL18A1-206, Transcript of collagen type XVIII alpha 1 chain, humanhuman

TSL 3

Gene COL18A1, Length 588 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL18A1-206ENST00000459895 SPAG11AQ6PDA7 123 aa7.35□□□□□ -1.23
COL18A1-206ENST00000459895 LRP2P98164 4655 aa7.34□□□□□ -1.23
COL18A1-206ENST00000459895 NAA38Q9BRA0 125 aaKnown RBP7.34□□□□□ -1.23
COL18A1-206ENST00000459895 A0A0G2JQZ4 141 aa7.33□□□□□ -1.24
COL18A1-206ENST00000459895 A0A1B0GX51 115 aa7.33□□□□□ -1.24
COL18A1-206ENST00000459895 F8WEM9 126 aa7.33□□□□□ -1.24
COL18A1-206ENST00000459895 C4orf48Q5BLP8 95 aa7.33□□□□□ -1.24
COL18A1-206ENST00000459895 PPDPFLQ8WWR9 84 aa7.33□□□□□ -1.24
COL18A1-206ENST00000459895 LPAP08519 4548 aa7.33□□□□□ -1.24
COL18A1-206ENST00000459895 SPINK1P00995 79 aa7.32□□□□□ -1.24
COL18A1-206ENST00000459895 PRR4Q16378 134 aa7.32□□□□□ -1.24
COL18A1-206ENST00000459895 COX6CP09669 75 aa7.31□□□□□ -1.24
COL18A1-206ENST00000459895 RPS29P62273 56 aaKnown RBP7.31□□□□□ -1.24
COL18A1-206ENST00000459895 HRCT1Q6UXD1 115 aa7.31□□□□□ -1.24
COL18A1-206ENST00000459895 UBR4Q5T4S7 5183 aa7.31□□□□□ -1.24
COL18A1-206ENST00000459895 LST1O00453 97 aa7.3□□□□□ -1.24
COL18A1-206ENST00000459895 SNCGO76070 127 aa7.3□□□□□ -1.24
COL18A1-206ENST00000459895 DNAL4O96015 105 aa7.3□□□□□ -1.24
COL18A1-206ENST00000459895 OCIAD2Q56VL3 154 aa7.3□□□□□ -1.24
COL18A1-206ENST00000459895 IGLV8-61A0A075B6I0 122 aa7.29□□□□□ -1.24
COL18A1-206ENST00000459895 H3BUT2 72 aa7.29□□□□□ -1.24
COL18A1-206ENST00000459895 TRACP01848 142 aa7.27□□□□□ -1.25
COL18A1-206ENST00000459895 IGFL1Q6UW32 110 aa7.27□□□□□ -1.25
COL18A1-206ENST00000459895 SNHG12Q9BXW3 62 aa7.27□□□□□ -1.25
COL18A1-206ENST00000459895 ORMDL1Q9P0S3 153 aa7.27□□□□□ -1.25
COL18A1-206ENST00000459895 SCGB1C2P0DMR2 95 aa7.26□□□□□ -1.25
COL18A1-206ENST00000459895 CD164Q04900 197 aa7.26□□□□□ -1.25
COL18A1-206ENST00000459895 LIMD2Q9BT23 127 aa7.26□□□□□ -1.25
COL18A1-206ENST00000459895 A0A1B0GV72 72 aa7.25□□□□□ -1.25
COL18A1-206ENST00000459895 TCL1BO95988 128 aa7.25□□□□□ -1.25
COL18A1-206ENST00000459895 FABP2P12104 132 aa7.25□□□□□ -1.25
COL18A1-206ENST00000459895 NDUFV3P56181 108 aaKnown RBP7.25□□□□□ -1.25
COL18A1-206ENST00000459895 Q6JHZ5 121 aa7.25□□□□□ -1.25
COL18A1-206ENST00000459895 TAX1BP3O14907 124 aa7.24□□□□□ -1.25
COL18A1-206ENST00000459895 FP248Q71RG6 208 aaPredicted RBP7.22□□□□□ -1.25
COL18A1-206ENST00000459895 IGLV7-46A0A075B6I9 117 aa7.21□□□□□ -1.26
COL18A1-206ENST00000459895 GHRHP01286 108 aa7.21□□□□□ -1.26
COL18A1-206ENST00000459895 ATXN8Q156A1 80 aa7.21□□□□□ -1.26
COL18A1-206ENST00000459895 LYRM7Q5U5X0 104 aa7.21□□□□□ -1.26
COL18A1-206ENST00000459895 C9orf118A6NHY6 69 aa7.2□□□□□ -1.26
COL18A1-206ENST00000459895 H3BMG7 143 aa7.2□□□□□ -1.26
COL18A1-206ENST00000459895 TPRXLQ17RH7 258 aa7.2□□□□□ -1.26
COL18A1-206ENST00000459895 TRBV7-7A0A0K0K1E9 115 aa7.19□□□□□ -1.26
COL18A1-206ENST00000459895 PCP4L1A6NKN8 68 aa7.19□□□□□ -1.26
COL18A1-206ENST00000459895 A0A1W2PPM0 123 aa7.18□□□□□ -1.26
COL18A1-206ENST00000459895 H3BQ85 93 aa7.18□□□□□ -1.26
COL18A1-206ENST00000459895 TMEM256-PLSCR3K7ERE1 68 aa7.18□□□□□ -1.26
COL18A1-206ENST00000459895 Q5XG85 94 aa7.18□□□□□ -1.26
COL18A1-206ENST00000459895 UBE2V1Q13404 147 aa7.16□□□□□ -1.26
COL18A1-206ENST00000459895 KRTAP13-3Q3SY46 172 aa7.16□□□□□ -1.26
COL18A1-206ENST00000459895 TRBV20-1A0A075B6N2 111 aa7.15□□□□□ -1.26
COL18A1-206ENST00000459895 COL5A1-AS1Q5SY13 56 aa7.15□□□□□ -1.26
COL18A1-206ENST00000459895 Q6Q795 121 aa7.15□□□□□ -1.26
COL18A1-206ENST00000459895 ANKRD29Q8N6D5 301 aa7.15□□□□□ -1.26
COL18A1-206ENST00000459895 A0A1W2PNM2 257 aa7.14□□□□□ -1.27
COL18A1-206ENST00000459895 BAALC-AS2P0C853 105 aa7.14□□□□□ -1.27
COL18A1-206ENST00000459895 C1orf195Q5TG92 126 aa7.14□□□□□ -1.27
COL18A1-206ENST00000459895 C9JAW5 83 aa7.13□□□□□ -1.27
COL18A1-206ENST00000459895 TEN1Q86WV5 123 aa7.13□□□□□ -1.27
COL18A1-206ENST00000459895 MTURNQ8N3F0 131 aa7.13□□□□□ -1.27
COL18A1-206ENST00000459895 RNF213Q63HN8 5207 aa7.12□□□□□ -1.27
COL18A1-206ENST00000459895 A0A087WSZ3 146 aa7.11□□□□□ -1.27
COL18A1-206ENST00000459895 TRBV7-4A0A0J9YYF1 115 aa7.11□□□□□ -1.27
COL18A1-206ENST00000459895 ASB16-AS1Q495Z4 193 aa7.11□□□□□ -1.27
COL18A1-206ENST00000459895 CDIP1Q9H305 208 aa7.11□□□□□ -1.27
COL18A1-206ENST00000459895 SPCS1Q9Y6A9 102 aa7.1□□□□□ -1.27
COL18A1-206ENST00000459895 MUC17Q685J3 4493 aa7.1□□□□□ -1.27
COL18A1-206ENST00000459895 CCKP06307 115 aa7.09□□□□□ -1.27
COL18A1-206ENST00000459895 SS18L2Q9UHA2 77 aa7.09□□□□□ -1.27
COL18A1-206ENST00000459895 RBM3P98179 157 aaKnown RBP7.08□□□□□ -1.28
COL18A1-206ENST00000459895 H3BT86 120 aa7.07□□□□□ -1.28
COL18A1-206ENST00000459895 C9orf92A6NGG3 77 aa7.06□□□□□ -1.28
COL18A1-206ENST00000459895 XP32Q5T750 250 aa7.06□□□□□ -1.28
COL18A1-206ENST00000459895 Q96NJ1 140 aa7.06□□□□□ -1.28
COL18A1-206ENST00000459895 DSCR8Q96T75 97 aa7.06□□□□□ -1.28
COL18A1-206ENST00000459895 VPS25Q9BRG1 176 aa7.06□□□□□ -1.28
COL18A1-206ENST00000459895 K7EP34 96 aa7.05□□□□□ -1.28
COL18A1-206ENST00000459895 C14orf132Q9NPU4 83 aa7.05□□□□□ -1.28
COL18A1-206ENST00000459895 JMJD7-PLA2G4BH0Y9G9 81 aa7.04□□□□□ -1.28
COL18A1-206ENST00000459895 Q6ZQT0 140 aa7.04□□□□□ -1.28
COL18A1-206ENST00000459895 LOC110117498A0A087WWA1 95 aa7.03□□□□□ -1.28
COL18A1-206ENST00000459895 OBSCN-AS1Q96MR7 158 aa7.03□□□□□ -1.28
COL18A1-206ENST00000459895 SMCPP49901 116 aaPredicted RBP7.01□□□□□ -1.29
COL18A1-206ENST00000459895 SIGMAR1Q99720 223 aa7.01□□□□□ -1.29
COL18A1-206ENST00000459895 PRO0461Q9UI25 63 aa7□□□□□ -1.29
COL18A1-206ENST00000459895 DEFB116Q30KQ4 102 aa6.96□□□□□ -1.3
COL18A1-206ENST00000459895 LINC00472Q9H8W2 130 aa6.96□□□□□ -1.3
COL18A1-206ENST00000459895 IGKV4-1P06312 121 aa6.95□□□□□ -1.3
COL18A1-206ENST00000459895 PDE6GP18545 87 aa6.95□□□□□ -1.3
COL18A1-206ENST00000459895 GTF2H5Q6ZYL4 71 aa6.95□□□□□ -1.3
COL18A1-206ENST00000459895 MUC2Q02817 5179 aa6.94□□□□□ -1.3
COL18A1-206ENST00000459895 SEC61BP60468 96 aaKnown RBP6.92□□□□□ -1.3
COL18A1-206ENST00000459895 C21orf62-AS1Q17RA5 79 aa6.92□□□□□ -1.3
COL18A1-206ENST00000459895 DSCR10P59022 87 aa6.91□□□□□ -1.3
COL18A1-206ENST00000459895 RPL37P61927 97 aaKnown RBP6.91□□□□□ -1.3
COL18A1-206ENST00000459895 A0A1B0GW54 56 aa6.9□□□□□ -1.3
COL18A1-206ENST00000459895 KRTAP4-1Q9BYQ7 146 aa6.9□□□□□ -1.3
COL18A1-206ENST00000459895 PCOTHQ58A44 107 aa6.88□□□□□ -1.31
COL18A1-206ENST00000459895 IGHV6-1A0A0B4J1U7 121 aa6.87□□□□□ -1.31
COL18A1-206ENST00000459895 A0A1B0GVX0 72 aa6.86□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms