RNA–Protein interactions for RNA: ENST00000459639.5

U2AF1-204, Transcript of U2 small nuclear RNA auxiliary factor 1, humanhuman

TSL 1 (best) BASIC

Gene U2AF1, Length 1,675 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
U2AF1-204ENST00000459639 SPRR4Q96PI1 79 aa14.83□□□□□ -0.04
U2AF1-204ENST00000459639 C21orf62-AS1Q17RA5 79 aa14.82□□□□□ -0.04
U2AF1-204ENST00000459639 LRP1BQ9NZR2 4599 aa14.82□□□□□ -0.04
U2AF1-204ENST00000459639 F8WEM9 126 aa14.81□□□□□ -0.04
U2AF1-204ENST00000459639 DYNC1H1Q14204 4646 aaKnown RBP14.8□□□□□ -0.04
U2AF1-204ENST00000459639 LINC00483Q53H64 154 aa14.79□□□□□ -0.04
U2AF1-204ENST00000459639 VPS25Q9BRG1 176 aa14.79□□□□□ -0.04
U2AF1-204ENST00000459639 CDIP1Q9H305 208 aa14.77□□□□□ -0.05
U2AF1-204ENST00000459639 IGLV8-61A0A075B6I0 122 aa14.76□□□□□ -0.05
U2AF1-204ENST00000459639 RYR3Q15413 4870 aa14.76□□□□□ -0.05
U2AF1-204ENST00000459639 SRRM2Q9UQ35 2752 aaKnown RBP14.73□□□□□ -0.05
U2AF1-204ENST00000459639 RPL37AP61513 92 aaKnown RBP14.71□□□□□ -0.06
U2AF1-204ENST00000459639 LINC00846Q9NV44 126 aa14.68□□□□□ -0.06
U2AF1-204ENST00000459639 Q6JHZ5 121 aa14.67□□□□□ -0.06
U2AF1-204ENST00000459639 IGFL1Q6UW32 110 aa14.66□□□□□ -0.06
U2AF1-204ENST00000459639 SMR3BP02814 79 aaPredicted RBP14.65□□□□□ -0.06
U2AF1-204ENST00000459639 Q8NBF4 154 aa14.65□□□□□ -0.06
U2AF1-204ENST00000459639 APOBP04114 4563 aaKnown RBP14.63□□□□□ -0.07
U2AF1-204ENST00000459639 A0A1W2PNM2 257 aa14.63□□□□□ -0.07
U2AF1-204ENST00000459639 A0A1B0GW54 56 aa14.61□□□□□ -0.07
U2AF1-204ENST00000459639 IGLV9-49A0A0B4J1Y8 123 aa14.61□□□□□ -0.07
U2AF1-204ENST00000459639 ANAPC11Q9NYG5 84 aa14.6□□□□□ -0.07
U2AF1-204ENST00000459639 C9orf153Q5TBE3 101 aa14.59□□□□□ -0.07
U2AF1-204ENST00000459639 CDK2AP2O75956 126 aa14.58□□□□□ -0.08
U2AF1-204ENST00000459639 LINC00643Q86TS7 51 aa14.58□□□□□ -0.08
U2AF1-204ENST00000459639 UBL5Q9BZL1 73 aa14.57□□□□□ -0.08
U2AF1-204ENST00000459639 A0A0G2JQZ4 141 aa14.56□□□□□ -0.08
U2AF1-204ENST00000459639 SPINK6Q6UWN8 80 aa14.56□□□□□ -0.08
U2AF1-204ENST00000459639 CRYGAP11844 174 aa14.55□□□□□ -0.08
U2AF1-204ENST00000459639 SIGMAR1Q99720 223 aa14.55□□□□□ -0.08
U2AF1-204ENST00000459639 KRTAP10-4P60372 401 aaPredicted RBP14.54□□□□□ -0.08
U2AF1-204ENST00000459639 MOBPQ13875 183 aa14.54□□□□□ -0.08
U2AF1-204ENST00000459639 VPS13BQ7Z7G8 4022 aa14.54□□□□□ -0.08
U2AF1-204ENST00000459639 FAM229BQ4G0N7 80 aa14.53□□□□□ -0.08
U2AF1-204ENST00000459639 MT-ATP8P03928 68 aa14.52□□□□□ -0.08
U2AF1-204ENST00000459639 Q6Q795 121 aa14.52□□□□□ -0.08
U2AF1-204ENST00000459639 Q6ZVQ6 151 aa14.51□□□□□ -0.09
U2AF1-204ENST00000459639 KRTAP1-4P0C5Y4 121 aa14.5□□□□□ -0.09
U2AF1-204ENST00000459639 TRBV7-7A0A0K0K1E9 115 aa14.46□□□□□ -0.1
U2AF1-204ENST00000459639 PLA2G1BP04054 148 aaKnown RBP14.45□□□□□ -0.1
U2AF1-204ENST00000459639 ATP5EP2Q5VTU8 51 aa14.45□□□□□ -0.1
U2AF1-204ENST00000459639 A0A087X002 238 aa14.44□□□□□ -0.1
U2AF1-204ENST00000459639 FAM229AH3BQW9 127 aa14.44□□□□□ -0.1
U2AF1-204ENST00000459639 SSBP3-AS1Q7Z2R9 100 aa14.44□□□□□ -0.1
U2AF1-204ENST00000459639 NREPQ16612 68 aa14.43□□□□□ -0.1
U2AF1-204ENST00000459639 A0A087WSZ3 146 aa14.42□□□□□ -0.1
U2AF1-204ENST00000459639 KRTAP13-2Q52LG2 175 aa14.4□□□□□ -0.1
U2AF1-204ENST00000459639 IGKV3D-7A0A0C4DH55 119 aa14.38□□□□□ -0.11
U2AF1-204ENST00000459639 IMUPQ9GZP8 106 aa14.36□□□□□ -0.11
U2AF1-204ENST00000459639 FAT1Q14517 4588 aa14.36□□□□□ -0.11
U2AF1-204ENST00000459639 CXCL6P80162 114 aa14.35□□□□□ -0.11
U2AF1-204ENST00000459639 Q5VSD8 79 aa14.35□□□□□ -0.11
U2AF1-204ENST00000459639 CD164Q04900 197 aa14.34□□□□□ -0.11
U2AF1-204ENST00000459639 HRCT1Q6UXD1 115 aa14.33□□□□□ -0.12
U2AF1-204ENST00000459639 HSPG2P98160 4391 aa14.3□□□□□ -0.12
U2AF1-204ENST00000459639 BPY2O14599 106 aa14.29□□□□□ -0.12
U2AF1-204ENST00000459639 SS18L2Q9UHA2 77 aa14.29□□□□□ -0.12
U2AF1-204ENST00000459639 TYMSOSQ8TAI1 123 aa14.27□□□□□ -0.12
U2AF1-204ENST00000459639 RYR1P21817 5038 aa14.26□□□□□ -0.13
U2AF1-204ENST00000459639 PRR26Q8N8Z3 221 aa14.24□□□□□ -0.13
U2AF1-204ENST00000459639 SCGB1A1P11684 91 aa14.23□□□□□ -0.13
U2AF1-204ENST00000459639 EPPK1P58107 5090 aaKnown RBP14.23□□□□□ -0.13
U2AF1-204ENST00000459639 HIST1H4AP62805 103 aaKnown RBP14.22□□□□□ -0.13
U2AF1-204ENST00000459639 LINC00472Q9H8W2 130 aa14.22□□□□□ -0.13
U2AF1-204ENST00000459639 Q8N1X5 172 aa14.21□□□□□ -0.13
U2AF1-204ENST00000459639 PKHD1L1Q86WI1 4243 aa14.19□□□□□ -0.14
U2AF1-204ENST00000459639 KRTAP17-1Q9BYP8 105 aa14.17□□□□□ -0.14
U2AF1-204ENST00000459639 DSCR10P59022 87 aa14.16□□□□□ -0.14
U2AF1-204ENST00000459639 A0A087WVE0 104 aa14.15□□□□□ -0.14
U2AF1-204ENST00000459639 DEFB116Q30KQ4 102 aa14.15□□□□□ -0.14
U2AF1-204ENST00000459639 Q96NJ1 140 aa14.15□□□□□ -0.14
U2AF1-204ENST00000459639 KIAA1109Q2LD37 5005 aa14.14□□□□□ -0.15
U2AF1-204ENST00000459639 J3KT08 172 aa14.14□□□□□ -0.15
U2AF1-204ENST00000459639 C4orf48Q5BLP8 95 aa14.14□□□□□ -0.15
U2AF1-204ENST00000459639 Q5XG85 94 aa14.14□□□□□ -0.15
U2AF1-204ENST00000459639 IGKV4-1P06312 121 aa14.13□□□□□ -0.15
U2AF1-204ENST00000459639 ASB16-AS1Q495Z4 193 aa14.13□□□□□ -0.15
U2AF1-204ENST00000459639 Q8N9L7 120 aa14.12□□□□□ -0.15
U2AF1-204ENST00000459639 LINC00304Q8N9R0 145 aa14.11□□□□□ -0.15
U2AF1-204ENST00000459639 SPINK1P00995 79 aa14.1□□□□□ -0.15
U2AF1-204ENST00000459639 LIMD2Q9BT23 127 aa14.1□□□□□ -0.15
U2AF1-204ENST00000459639 FAM236AA0A1B0GUQ0 79 aa14.1□□□□□ -0.15
U2AF1-204ENST00000459639 FAM236BA0A1B0GV22 79 aa14.1□□□□□ -0.15
U2AF1-204ENST00000459639 SPAG11AQ6PDA7 123 aa14.09□□□□□ -0.15
U2AF1-204ENST00000459639 K7EQZ3 153 aa14.08□□□□□ -0.16
U2AF1-204ENST00000459639 A8MWP4 228 aa14.06□□□□□ -0.16
U2AF1-204ENST00000459639 RPS29P62273 56 aaKnown RBP14.06□□□□□ -0.16
U2AF1-204ENST00000459639 PRR15Q8IV56 129 aa14□□□□□ -0.17
U2AF1-204ENST00000459639 NDUFB1O75438 58 aa13.99□□□□□ -0.17
U2AF1-204ENST00000459639 C1orf195Q5TG92 126 aa13.96□□□□□ -0.17
U2AF1-204ENST00000459639 KRTAP10-8P60410 259 aa13.95□□□□□ -0.18
U2AF1-204ENST00000459639 ATOX1O00244 68 aa13.94□□□□□ -0.18
U2AF1-204ENST00000459639 HCG22E2RYF7 251 aa13.91□□□□□ -0.18
U2AF1-204ENST00000459639 A0A1B0GVX0 72 aa13.91□□□□□ -0.18
U2AF1-204ENST00000459639 ANAPC13Q9BS18 74 aa13.89□□□□□ -0.19
U2AF1-204ENST00000459639 PCP4P48539 62 aa13.88□□□□□ -0.19
U2AF1-204ENST00000459639 IGHV6-1A0A0B4J1U7 121 aa13.85□□□□□ -0.19
U2AF1-204ENST00000459639 MMP24-AS1A0A0U1RRL7 71 aa13.84□□□□□ -0.19
U2AF1-204ENST00000459639 FLG2Q5D862 2391 aaPredicted RBP13.82□□□□□ -0.2
U2AF1-204ENST00000459639 WFDC13Q8IUB5 93 aa13.82□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms