RNA–Protein interactions for RNA: ENST00000441350.2

VPS13B-204, Transcript of vacuolar protein sorting 13 homolog B, humanhuman

TSL 1 (best) BASIC

Gene VPS13B, Length 1,626 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13B-204ENST00000441350 KRTAP1-4P0C5Y4 121 aa12.61□□□□□ -0.39
VPS13B-204ENST00000441350 SMCPP49901 116 aaPredicted RBP12.61□□□□□ -0.39
VPS13B-204ENST00000441350 SMIM29Q86T20 159 aa12.6□□□□□ -0.39
VPS13B-204ENST00000441350 LINC01600Q96MT4 127 aa12.6□□□□□ -0.39
VPS13B-204ENST00000441350 ANKRD29Q8N6D5 301 aa12.59□□□□□ -0.39
VPS13B-204ENST00000441350 ANAPC11Q9NYG5 84 aa12.59□□□□□ -0.39
VPS13B-204ENST00000441350 F8W1H4 67 aa12.58□□□□□ -0.4
VPS13B-204ENST00000441350 C3orf22Q8N5N4 141 aa12.57□□□□□ -0.4
VPS13B-204ENST00000441350 HERC2O95714 4834 aa12.56□□□□□ -0.4
VPS13B-204ENST00000441350 NDUFV3P56181 108 aaKnown RBP12.55□□□□□ -0.4
VPS13B-204ENST00000441350 FAM229BQ4G0N7 80 aa12.55□□□□□ -0.4
VPS13B-204ENST00000441350 KRTAP4-5Q9BYR2 181 aa12.54□□□□□ -0.4
VPS13B-204ENST00000441350 LAMTOR3Q9UHA4 124 aa12.53□□□□□ -0.4
VPS13B-204ENST00000441350 A0A087X002 238 aa12.5□□□□□ -0.41
VPS13B-204ENST00000441350 CRYGAP11844 174 aa12.48□□□□□ -0.41
VPS13B-204ENST00000441350 OBSCN-AS1Q96MR7 158 aa12.48□□□□□ -0.41
VPS13B-204ENST00000441350 IGLV8-61A0A075B6I0 122 aa12.47□□□□□ -0.41
VPS13B-204ENST00000441350 F8WEM9 126 aa12.47□□□□□ -0.41
VPS13B-204ENST00000441350 IGLV9-49A0A0B4J1Y8 123 aa12.46□□□□□ -0.41
VPS13B-204ENST00000441350 KRTAP13-2Q52LG2 175 aa12.46□□□□□ -0.41
VPS13B-204ENST00000441350 A0A1B0GV72 72 aa12.44□□□□□ -0.42
VPS13B-204ENST00000441350 JMJD7-PLA2G4BH0Y9G9 81 aa12.44□□□□□ -0.42
VPS13B-204ENST00000441350 TEN1Q86WV5 123 aa12.44□□□□□ -0.42
VPS13B-204ENST00000441350 RBM3P98179 157 aaKnown RBP12.43□□□□□ -0.42
VPS13B-204ENST00000441350 MOBPQ13875 183 aa12.43□□□□□ -0.42
VPS13B-204ENST00000441350 ETDBQ3ZM63 59 aa12.43□□□□□ -0.42
VPS13B-204ENST00000441350 C9orf153Q5TBE3 101 aa12.42□□□□□ -0.42
VPS13B-204ENST00000441350 PRR26Q8N8Z3 221 aa12.42□□□□□ -0.42
VPS13B-204ENST00000441350 Q8NBF4 154 aa12.41□□□□□ -0.42
VPS13B-204ENST00000441350 FLG2Q5D862 2391 aaPredicted RBP12.4□□□□□ -0.42
VPS13B-204ENST00000441350 TRBV7-4A0A0J9YYF1 115 aa12.38□□□□□ -0.43
VPS13B-204ENST00000441350 Q6JHZ5 121 aa12.38□□□□□ -0.43
VPS13B-204ENST00000441350 SSBP3-AS1Q7Z2R9 100 aa12.38□□□□□ -0.43
VPS13B-204ENST00000441350 IGFL1Q6UW32 110 aa12.37□□□□□ -0.43
VPS13B-204ENST00000441350 DSCR8Q96T75 97 aa12.37□□□□□ -0.43
VPS13B-204ENST00000441350 C14orf132Q9NPU4 83 aa12.37□□□□□ -0.43
VPS13B-204ENST00000441350 LRP1Q07954 4544 aaKnown RBP12.36□□□□□ -0.43
VPS13B-204ENST00000441350 A0A0G2JQZ4 141 aa12.36□□□□□ -0.43
VPS13B-204ENST00000441350 TYMSOSQ8TAI1 123 aa12.36□□□□□ -0.43
VPS13B-204ENST00000441350 FAT3Q8TDW7 4589 aa12.35□□□□□ -0.43
VPS13B-204ENST00000441350 LOC110117498A0A087WWA1 95 aa12.34□□□□□ -0.43
VPS13B-204ENST00000441350 ABCA13Q86UQ4 5058 aa12.33□□□□□ -0.44
VPS13B-204ENST00000441350 KRTAP10-8P60410 259 aa12.32□□□□□ -0.44
VPS13B-204ENST00000441350 Q6ZQT0 140 aa12.32□□□□□ -0.44
VPS13B-204ENST00000441350 MYCBP2O75592 4640 aa12.32□□□□□ -0.44
VPS13B-204ENST00000441350 PDE6GP18545 87 aa12.31□□□□□ -0.44
VPS13B-204ENST00000441350 A0A1W2PNM2 257 aa12.29□□□□□ -0.44
VPS13B-204ENST00000441350 OXTP01178 125 aa12.29□□□□□ -0.44
VPS13B-204ENST00000441350 CCKP06307 115 aa12.26□□□□□ -0.45
VPS13B-204ENST00000441350 TNXBP22105 4242 aa12.26□□□□□ -0.45
VPS13B-204ENST00000441350 MT1HL1P0DM35 61 aa12.25□□□□□ -0.45
VPS13B-204ENST00000441350 CD164Q04900 197 aa12.25□□□□□ -0.45
VPS13B-204ENST00000441350 Q6Q795 121 aa12.25□□□□□ -0.45
VPS13B-204ENST00000441350 KRTAP29-1A8MX34 341 aaPredicted RBP12.23□□□□□ -0.45
VPS13B-204ENST00000441350 C21orf62-AS1Q17RA5 79 aa12.23□□□□□ -0.45
VPS13B-204ENST00000441350 LINC00304Q8N9R0 145 aa12.22□□□□□ -0.45
VPS13B-204ENST00000441350 VPS25Q9BRG1 176 aa12.22□□□□□ -0.45
VPS13B-204ENST00000441350 HRCT1Q6UXD1 115 aa12.21□□□□□ -0.46
VPS13B-204ENST00000441350 TRBV7-7A0A0K0K1E9 115 aa12.19□□□□□ -0.46
VPS13B-204ENST00000441350 SPAG11AQ6PDA7 123 aa12.19□□□□□ -0.46
VPS13B-204ENST00000441350 C4orf48Q5BLP8 95 aa12.18□□□□□ -0.46
VPS13B-204ENST00000441350 A0A1B0GW54 56 aa12.16□□□□□ -0.46
VPS13B-204ENST00000441350 SPINK1P00995 79 aa12.16□□□□□ -0.46
VPS13B-204ENST00000441350 A0A087WSZ3 146 aa12.13□□□□□ -0.47
VPS13B-204ENST00000441350 RPS29P62273 56 aaKnown RBP12.11□□□□□ -0.47
VPS13B-204ENST00000441350 Q5XG85 94 aa12.1□□□□□ -0.47
VPS13B-204ENST00000441350 FAM240AA0A1B0GVK7 77 aa12.08□□□□□ -0.48
VPS13B-204ENST00000441350 DMBT1Q9UGM3 2413 aaPredicted RBP12.08□□□□□ -0.48
VPS13B-204ENST00000441350 J3QR89 54 aa12.08□□□□□ -0.48
VPS13B-204ENST00000441350 PCLOQ9Y6V0 5065 aa12.07□□□□□ -0.48
VPS13B-204ENST00000441350 ACYP1P07311 99 aa12.06□□□□□ -0.48
VPS13B-204ENST00000441350 LIMD2Q9BT23 127 aa12.06□□□□□ -0.48
VPS13B-204ENST00000441350 LINC00846Q9NV44 126 aa12.06□□□□□ -0.48
VPS13B-204ENST00000441350 SS18L2Q9UHA2 77 aa12.06□□□□□ -0.48
VPS13B-204ENST00000441350 J3QL48 77 aa12.04□□□□□ -0.48
VPS13B-204ENST00000441350 ASB16-AS1Q495Z4 193 aa12.04□□□□□ -0.48
VPS13B-204ENST00000441350 K7ERU9 68 aa12.01□□□□□ -0.49
VPS13B-204ENST00000441350 NREPQ16612 68 aa11.98□□□□□ -0.49
VPS13B-204ENST00000441350 Q6ZVQ6 151 aa11.97□□□□□ -0.49
VPS13B-204ENST00000441350 Q96NJ1 140 aa11.97□□□□□ -0.49
VPS13B-204ENST00000441350 LINC00472Q9H8W2 130 aa11.97□□□□□ -0.49
VPS13B-204ENST00000441350 C1orf195Q5TG92 126 aa11.96□□□□□ -0.5
VPS13B-204ENST00000441350 UBL5Q9BZL1 73 aa11.96□□□□□ -0.5
VPS13B-204ENST00000441350 DEFB116Q30KQ4 102 aa11.9□□□□□ -0.5
VPS13B-204ENST00000441350 RETNLBQ9BQ08 111 aa11.89□□□□□ -0.51
VPS13B-204ENST00000441350 CDIP1Q9H305 208 aa11.89□□□□□ -0.51
VPS13B-204ENST00000441350 IGKV4-1P06312 121 aa11.86□□□□□ -0.51
VPS13B-204ENST00000441350 J3KT08 172 aa11.85□□□□□ -0.51
VPS13B-204ENST00000441350 SIGMAR1Q99720 223 aa11.84□□□□□ -0.51
VPS13B-204ENST00000441350 BPY2O14599 106 aa11.83□□□□□ -0.52
VPS13B-204ENST00000441350 LINC00643Q86TS7 51 aa11.83□□□□□ -0.52
VPS13B-204ENST00000441350 DSCR10P59022 87 aa11.81□□□□□ -0.52
VPS13B-204ENST00000441350 FP248Q71RG6 208 aaPredicted RBP11.79□□□□□ -0.52
VPS13B-204ENST00000441350 CXCL6P80162 114 aa11.78□□□□□ -0.52
VPS13B-204ENST00000441350 A8MWP4 228 aa11.77□□□□□ -0.53
VPS13B-204ENST00000441350 ATP5EP2Q5VTU8 51 aa11.77□□□□□ -0.53
VPS13B-204ENST00000441350 IGKV3D-7A0A0C4DH55 119 aa11.75□□□□□ -0.53
VPS13B-204ENST00000441350 IGLV7-46A0A075B6I9 117 aa11.71□□□□□ -0.53
VPS13B-204ENST00000441350 A0A1B0GVX0 72 aa11.71□□□□□ -0.53
VPS13B-204ENST00000441350 K7EQZ3 153 aa11.71□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 118.4 ms