RNA–Protein interactions for RNA: ENST00000437941.6

SSX2IP-203, Transcript of SSX family member 2 interacting protein, humanhuman

TSL 2 BASIC

Gene SSX2IP, Length 5,843 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSX2IP-203ENST00000437941 KRTAP26-1Q6PEX3 210 aa13.36□□□□□ -0.27
SSX2IP-203ENST00000437941 Q1T7F1 81 aa13.35□□□□□ -0.27
SSX2IP-203ENST00000437941 LINC00472Q9H8W2 130 aa13.35□□□□□ -0.27
SSX2IP-203ENST00000437941 KTN1-AS1Q86SY8 53 aa13.35□□□□□ -0.27
SSX2IP-203ENST00000437941 Q5W150 140 aa13.33□□□□□ -0.27
SSX2IP-203ENST00000437941 LCA10Q71F78 164 aa13.32□□□□□ -0.28
SSX2IP-203ENST00000437941 COL6A5A8TX70 2615 aa13.32□□□□□ -0.28
SSX2IP-203ENST00000437941 LINC00483Q53H64 154 aa13.31□□□□□ -0.28
SSX2IP-203ENST00000437941 AKAP13Q12802 2813 aa13.31□□□□□ -0.28
SSX2IP-203ENST00000437941 LUZP6Q538Z0 58 aa13.3□□□□□ -0.28
SSX2IP-203ENST00000437941 DMAC1Q96GE9 116 aa13.27□□□□□ -0.28
SSX2IP-203ENST00000437941 C5orf42Q9H799 3197 aa13.26□□□□□ -0.29
SSX2IP-203ENST00000437941 R4GN34 69 aa13.25□□□□□ -0.29
SSX2IP-203ENST00000437941 CHD6Q8TD26 2715 aa13.25□□□□□ -0.29
SSX2IP-203ENST00000437941 UTRNP46939 3433 aa13.23□□□□□ -0.29
SSX2IP-203ENST00000437941 FP248Q71RG6 208 aaPredicted RBP13.23□□□□□ -0.29
SSX2IP-203ENST00000437941 Q6ZR54 194 aa13.22□□□□□ -0.29
SSX2IP-203ENST00000437941 OXTP01178 125 aa13.22□□□□□ -0.29
SSX2IP-203ENST00000437941 NBEAL1Q6ZS30 2694 aa13.2□□□□□ -0.3
SSX2IP-203ENST00000437941 ZNF292O60281 2723 aa13.18□□□□□ -0.3
SSX2IP-203ENST00000437941 BAHCC1Q9P281 2608 aa13.18□□□□□ -0.3
SSX2IP-203ENST00000437941 LINC01558Q9Y6Z2 57 aa13.16□□□□□ -0.3
SSX2IP-203ENST00000437941 CHD9Q3L8U1 2897 aa13.16□□□□□ -0.3
SSX2IP-203ENST00000437941 Q75L30 129 aa13.15□□□□□ -0.3
SSX2IP-203ENST00000437941 UNC79Q9P2D8 2635 aa13.13□□□□□ -0.31
SSX2IP-203ENST00000437941 FLG2Q5D862 2391 aaPredicted RBP13.12□□□□□ -0.31
SSX2IP-203ENST00000437941 PANO1I0J062 215 aa13.1□□□□□ -0.31
SSX2IP-203ENST00000437941 MGAQ8IWI9 3026 aa13.06□□□□□ -0.32
SSX2IP-203ENST00000437941 NOTCH1P46531 2555 aa13.06□□□□□ -0.32
SSX2IP-203ENST00000437941 KRTAP4-16G5E9R7 235 aaPredicted RBP12.98□□□□□ -0.33
SSX2IP-203ENST00000437941 A0A087X002 238 aa12.97□□□□□ -0.33
SSX2IP-203ENST00000437941 M0QZ58 72 aa12.97□□□□□ -0.33
SSX2IP-203ENST00000437941 IGSF10Q6WRI0 2623 aa12.92□□□□□ -0.34
SSX2IP-203ENST00000437941 GCN1Q92616 2671 aaKnown RBP12.92□□□□□ -0.34
SSX2IP-203ENST00000437941 RANBP2P49792 3224 aaKnown RBP12.91□□□□□ -0.34
SSX2IP-203ENST00000437941 RPL37P61927 97 aaKnown RBP12.88□□□□□ -0.35
SSX2IP-203ENST00000437941 PLAC4Q8WY50 150 aa12.87□□□□□ -0.35
SSX2IP-203ENST00000437941 Q6ZRN7 208 aaPredicted RBP12.84□□□□□ -0.35
SSX2IP-203ENST00000437941 KRTAP21-3Q3LHN1 58 aa12.84□□□□□ -0.35
SSX2IP-203ENST00000437941 HTTP42858 3142 aa12.83□□□□□ -0.36
SSX2IP-203ENST00000437941 TRANK1O15050 2925 aa12.81□□□□□ -0.36
SSX2IP-203ENST00000437941 RPS29P62273 56 aaKnown RBP12.81□□□□□ -0.36
SSX2IP-203ENST00000437941 ADM2Q7Z4H4 148 aa12.8□□□□□ -0.36
SSX2IP-203ENST00000437941 H1FX-AS1Q4G0G2 97 aa12.8□□□□□ -0.36
SSX2IP-203ENST00000437941 Q5VV11 94 aa12.79□□□□□ -0.36
SSX2IP-203ENST00000437941 DMBT1Q9UGM3 2413 aaPredicted RBP12.79□□□□□ -0.36
SSX2IP-203ENST00000437941 UBR5O95071 2799 aaPredicted RBP12.79□□□□□ -0.36
SSX2IP-203ENST00000437941 DSPP15924 2871 aaKnown RBP12.78□□□□□ -0.36
SSX2IP-203ENST00000437941 CYSTM1Q9H1C7 97 aa12.76□□□□□ -0.37
SSX2IP-203ENST00000437941 CFAP54Q96N23 3096 aa12.75□□□□□ -0.37
SSX2IP-203ENST00000437941 ASB16-AS1Q495Z4 193 aa12.73□□□□□ -0.37
SSX2IP-203ENST00000437941 KRTAP29-1A8MX34 341 aaPredicted RBP12.73□□□□□ -0.37
SSX2IP-203ENST00000437941 NSD1Q96L73 2696 aaPredicted RBP12.71□□□□□ -0.37
SSX2IP-203ENST00000437941 ROMO1P60602 79 aa12.7□□□□□ -0.38
SSX2IP-203ENST00000437941 STAB2Q8WWQ8 2551 aa12.69□□□□□ -0.38
SSX2IP-203ENST00000437941 KRTAP11-1Q8IUC1 163 aa12.68□□□□□ -0.38
SSX2IP-203ENST00000437941 ITPR2Q14571 2701 aa12.67□□□□□ -0.38
SSX2IP-203ENST00000437941 PRAC1Q96KF2 57 aa12.67□□□□□ -0.38
SSX2IP-203ENST00000437941 Q5XG85 94 aa12.67□□□□□ -0.38
SSX2IP-203ENST00000437941 MAP1AP78559 2803 aaPredicted RBP12.66□□□□□ -0.38
SSX2IP-203ENST00000437941 NBEAL2Q6ZNJ1 2754 aa12.66□□□□□ -0.38
SSX2IP-203ENST00000437941 WDFY4Q6ZS81 3184 aa12.65□□□□□ -0.38
SSX2IP-203ENST00000437941 PCNTO95613 3336 aa12.63□□□□□ -0.39
SSX2IP-203ENST00000437941 NOTCH2NLQ7Z3S9 236 aa12.63□□□□□ -0.39
SSX2IP-203ENST00000437941 A0A0C4DFX4 3053 aa12.62□□□□□ -0.39
SSX2IP-203ENST00000437941 LAMA3Q16787 3333 aa12.61□□□□□ -0.39
SSX2IP-203ENST00000437941 SPATA8Q6RVD6 105 aa12.58□□□□□ -0.4
SSX2IP-203ENST00000437941 KRTAP13-2Q52LG2 175 aa12.56□□□□□ -0.4
SSX2IP-203ENST00000437941 KRTAP7-1Q8IUC3 87 aa12.53□□□□□ -0.4
SSX2IP-203ENST00000437941 FRYQ5TBA9 3013 aa12.5□□□□□ -0.41
SSX2IP-203ENST00000437941 PRUNE2Q8WUY3 3088 aa12.49□□□□□ -0.41
SSX2IP-203ENST00000437941 A0A0A0MQY5 61 aa12.48□□□□□ -0.41
SSX2IP-203ENST00000437941 KRTAP13-1Q8IUC0 172 aa12.47□□□□□ -0.41
SSX2IP-203ENST00000437941 A8MUU9 505 aa12.45□□□□□ -0.42
SSX2IP-203ENST00000437941 MKI67P46013 3256 aaKnown RBP12.44□□□□□ -0.42
SSX2IP-203ENST00000437941 C20orf166-AS1Q96NR2 134 aa12.44□□□□□ -0.42
SSX2IP-203ENST00000437941 ITPR1Q14643 2758 aa12.44□□□□□ -0.42
SSX2IP-203ENST00000437941 KMT2BQ9UMN6 2715 aaPredicted RBP12.38□□□□□ -0.43
SSX2IP-203ENST00000437941 TRIOO75962 3097 aa12.28□□□□□ -0.44
SSX2IP-203ENST00000437941 LAMA2P24043 3122 aaKnown RBP12.27□□□□□ -0.44
SSX2IP-203ENST00000437941 BRCA2P51587 3418 aa12.27□□□□□ -0.45
SSX2IP-203ENST00000437941 HIVEP1P15822 2718 aa12.26□□□□□ -0.45
SSX2IP-203ENST00000437941 TENM4Q6N022 2769 aa12.26□□□□□ -0.45
SSX2IP-203ENST00000437941 FLNCQ14315 2725 aa12.22□□□□□ -0.45
SSX2IP-203ENST00000437941 TACC2O95359 2948 aa12.2□□□□□ -0.46
SSX2IP-203ENST00000437941 A8MU10 97 aa12.16□□□□□ -0.46
SSX2IP-203ENST00000437941 REV3LO60673 3130 aa12.16□□□□□ -0.46
SSX2IP-203ENST00000437941 XIRP2A4UGR9 3374 aa12.13□□□□□ -0.47
SSX2IP-203ENST00000437941 UTP20O75691 2785 aaKnown RBP12.13□□□□□ -0.47
SSX2IP-203ENST00000437941 VPS13AQ96RL7 3174 aa12.12□□□□□ -0.47
SSX2IP-203ENST00000437941 ATMQ13315 3056 aa12.05□□□□□ -0.48
SSX2IP-203ENST00000437941 COL12A1Q99715 3063 aa12.02□□□□□ -0.49
SSX2IP-203ENST00000437941 TNP1P09430 55 aa12.02□□□□□ -0.49
SSX2IP-203ENST00000437941 UNC80Q8N2C7 3258 aa12.01□□□□□ -0.49
SSX2IP-203ENST00000437941 APCP25054 2843 aa11.97□□□□□ -0.49
SSX2IP-203ENST00000437941 XP32Q5T750 250 aa11.96□□□□□ -0.49
SSX2IP-203ENST00000437941 KRTAP1-4P0C5Y4 121 aa11.96□□□□□ -0.5
SSX2IP-203ENST00000437941 CRYBG3Q68DQ2 2970 aa11.95□□□□□ -0.5
SSX2IP-203ENST00000437941 NIPBLQ6KC79 2804 aaeCLIP11.94□□□□□ -0.5
SSX2IP-203ENST00000437941 H3BS24 57 aa11.93□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms