RNA–Protein interactions for RNA: ENST00000429856.1

HMGB1P9-201, Transcript of high mobility group box 1 pseudogene 9, humanhuman

BASIC

Gene HMGB1P9, Length 646 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P9-201ENST00000429856 NCOR2Q9Y618 2525 aa0.75□□□□□ -2.29
HMGB1P9-201ENST00000429856 EP300Q09472 2414 aaPredicted RBP0.75□□□□□ -2.29
HMGB1P9-201ENST00000429856 VPS13AQ96RL7 3174 aa0.75□□□□□ -2.29
HMGB1P9-201ENST00000429856 LINC00959A0A1B0GUT2 108 aa0.75□□□□□ -2.29
HMGB1P9-201ENST00000429856 S100A3P33764 101 aa0.75□□□□□ -2.29
HMGB1P9-201ENST00000429856 A0A0G2JMZ2 1700 aa0.75□□□□□ -2.29
HMGB1P9-201ENST00000429856 FRYQ5TBA9 3013 aa0.75□□□□□ -2.29
HMGB1P9-201ENST00000429856 HYDINQ4G0P3 5121 aa0.74□□□□□ -2.29
HMGB1P9-201ENST00000429856 FAM186AA6NE01 2351 aa0.74□□□□□ -2.29
HMGB1P9-201ENST00000429856 KMT2CQ8NEZ4 4911 aaKnown RBP0.74□□□□□ -2.29
HMGB1P9-201ENST00000429856 PRB3Q04118 309 aaPredicted RBP0.74□□□□□ -2.29
HMGB1P9-201ENST00000429856 C18orf32Q8TCD1 76 aa0.74□□□□□ -2.29
HMGB1P9-201ENST00000429856 PRO3102Q9H379 93 aa0.74□□□□□ -2.29
HMGB1P9-201ENST00000429856 URB1O60287 2271 aaKnown RBP0.74□□□□□ -2.29
HMGB1P9-201ENST00000429856 DOPEY2Q9Y3R5 2298 aa0.74□□□□□ -2.29
HMGB1P9-201ENST00000429856 ZNF469Q96JG9 3925 aaPredicted RBP0.74□□□□□ -2.29
HMGB1P9-201ENST00000429856 CDH23Q9H251 3354 aa0.73□□□□□ -2.29
HMGB1P9-201ENST00000429856 GPR98Q8WXG9 6306 aa0.73□□□□□ -2.29
HMGB1P9-201ENST00000429856 BSNQ9UPA5 3926 aa0.73□□□□□ -2.29
HMGB1P9-201ENST00000429856 CACNA1HO95180 2353 aa0.73□□□□□ -2.29
HMGB1P9-201ENST00000429856 A0A0D9SFI3 127 aa0.73□□□□□ -2.29
HMGB1P9-201ENST00000429856 A0A1B0GUT8 65 aa0.73□□□□□ -2.29
HMGB1P9-201ENST00000429856 DEFB121Q5J5C9 76 aa0.73□□□□□ -2.29
HMGB1P9-201ENST00000429856 CELSR1Q9NYQ6 3014 aa0.73□□□□□ -2.29
HMGB1P9-201ENST00000429856 CSMD1Q96PZ7 3565 aa0.72□□□□□ -2.29
HMGB1P9-201ENST00000429856 HIVEP3Q5T1R4 2406 aa0.72□□□□□ -2.29
HMGB1P9-201ENST00000429856 TRBV7-4A0A0J9YYF1 115 aa0.72□□□□□ -2.29
HMGB1P9-201ENST00000429856 I3L2K1 104 aa0.72□□□□□ -2.29
HMGB1P9-201ENST00000429856 CFDP00746 253 aaPredicted RBP0.72□□□□□ -2.29
HMGB1P9-201ENST00000429856 COX6A2Q02221 97 aa0.72□□□□□ -2.29
HMGB1P9-201ENST00000429856 KRTAP5-10Q6L8G5 202 aa0.72□□□□□ -2.29
HMGB1P9-201ENST00000429856 TP53AIP1Q9HCN2 124 aa0.72□□□□□ -2.29
HMGB1P9-201ENST00000429856 SMCO4Q9NRQ5 59 aa0.72□□□□□ -2.29
HMGB1P9-201ENST00000429856 LOC400499M0QZD8 3231 aa0.72□□□□□ -2.29
HMGB1P9-201ENST00000429856 NBEAQ8NFP9 2946 aa0.72□□□□□ -2.29
HMGB1P9-201ENST00000429856 NF1P21359 2839 aa0.72□□□□□ -2.29
HMGB1P9-201ENST00000429856 USP9YO00507 2555 aaPredicted RBP0.71□□□□□ -2.3
HMGB1P9-201ENST00000429856 DNAH14Q0VDD8 3507 aa0.71□□□□□ -2.3
HMGB1P9-201ENST00000429856 DMXL1Q9Y485 3027 aa0.71□□□□□ -2.3
HMGB1P9-201ENST00000429856 CRYBG3Q68DQ2 2970 aa0.71□□□□□ -2.3
HMGB1P9-201ENST00000429856 IGF2RP11717 2491 aa0.71□□□□□ -2.3
HMGB1P9-201ENST00000429856 DEFA5Q01523 94 aa0.71□□□□□ -2.3
HMGB1P9-201ENST00000429856 DEFB112Q30KQ8 113 aa0.71□□□□□ -2.3
HMGB1P9-201ENST00000429856 CNFNQ9BYD5 112 aa0.71□□□□□ -2.3
HMGB1P9-201ENST00000429856 SMG1Q96Q15 3661 aaKnown RBP0.71□□□□□ -2.3
HMGB1P9-201ENST00000429856 FREM2Q5SZK8 3169 aa0.71□□□□□ -2.3
HMGB1P9-201ENST00000429856 RYR2Q92736 4967 aa0.7□□□□□ -2.3
HMGB1P9-201ENST00000429856 FRAS1Q86XX4 4008 aa0.7□□□□□ -2.3
HMGB1P9-201ENST00000429856 TLN2Q9Y4G6 2542 aa0.7□□□□□ -2.3
HMGB1P9-201ENST00000429856 ABCA13Q86UQ4 5058 aa0.7□□□□□ -2.3
HMGB1P9-201ENST00000429856 COL12A1Q99715 3063 aa0.7□□□□□ -2.3
HMGB1P9-201ENST00000429856 RIF1Q5UIP0 2472 aaKnown RBP0.7□□□□□ -2.3
HMGB1P9-201ENST00000429856 PDCD5O14737 125 aa0.7□□□□□ -2.3
HMGB1P9-201ENST00000429856 SMIM13P0DJ93 91 aa0.7□□□□□ -2.3
HMGB1P9-201ENST00000429856 SMIM5Q71RC9 77 aa0.7□□□□□ -2.3
HMGB1P9-201ENST00000429856 PRO0255Q9UI72 69 aa0.7□□□□□ -2.3
HMGB1P9-201ENST00000429856 FRYLO94915 3013 aa0.7□□□□□ -2.3
HMGB1P9-201ENST00000429856 USF3Q68DE3 2245 aa0.7□□□□□ -2.3
HMGB1P9-201ENST00000429856 TSC2P49815 1807 aa0.7□□□□□ -2.3
HMGB1P9-201ENST00000429856 F8P00451 2351 aa0.69□□□□□ -2.3
HMGB1P9-201ENST00000429856 HERC1Q15751 4861 aa0.69□□□□□ -2.3
HMGB1P9-201ENST00000429856 TRAV21A0A0B4J279 112 aa0.69□□□□□ -2.3
HMGB1P9-201ENST00000429856 Q9Y3F1 56 aa0.69□□□□□ -2.3
HMGB1P9-201ENST00000429856 WDR87Q6ZQQ6 2873 aa0.69□□□□□ -2.3
HMGB1P9-201ENST00000429856 MGAM2Q2M2H8 2515 aa0.69□□□□□ -2.3
HMGB1P9-201ENST00000429856 ZZEF1O43149 2961 aa0.69□□□□□ -2.3
HMGB1P9-201ENST00000429856 OTOGQ6ZRI0 2925 aa0.68□□□□□ -2.3
HMGB1P9-201ENST00000429856 HERC2O95714 4834 aa0.68□□□□□ -2.3
HMGB1P9-201ENST00000429856 KRTAP20-1Q3LI63 56 aa0.68□□□□□ -2.3
HMGB1P9-201ENST00000429856 PIGYQ3MUY2 71 aa0.68□□□□□ -2.3
HMGB1P9-201ENST00000429856 Q5BKY6 102 aa0.68□□□□□ -2.3
HMGB1P9-201ENST00000429856 PRRC2CQ9Y520 2896 aaKnown RBP0.68□□□□□ -2.3
HMGB1P9-201ENST00000429856 NBPF19A0A087WUL8 3843 aa0.67□□□□□ -2.3
HMGB1P9-201ENST00000429856 NIPBLQ6KC79 2804 aaeCLIP0.67□□□□□ -2.3
HMGB1P9-201ENST00000429856 NBASA2RRP1 2371 aa0.67□□□□□ -2.3
HMGB1P9-201ENST00000429856 SPTBN2O15020 2390 aa0.67□□□□□ -2.3
HMGB1P9-201ENST00000429856 A0A087WXM4 84 aa0.67□□□□□ -2.3
HMGB1P9-201ENST00000429856 IFI6P09912 130 aa0.67□□□□□ -2.3
HMGB1P9-201ENST00000429856 CD52P31358 61 aa0.67□□□□□ -2.3
HMGB1P9-201ENST00000429856 ATP5EP2Q5VTU8 51 aa0.67□□□□□ -2.3
HMGB1P9-201ENST00000429856 Q8IZM0 81 aa0.67□□□□□ -2.3
HMGB1P9-201ENST00000429856 WFDC9Q8NEX5 89 aa0.67□□□□□ -2.3
HMGB1P9-201ENST00000429856 GAFA1Q96PS6 74 aa0.67□□□□□ -2.3
HMGB1P9-201ENST00000429856 CRIPTQ9P021 101 aa0.67□□□□□ -2.3
HMGB1P9-201ENST00000429856 LRBAP50851 2863 aa0.67□□□□□ -2.3
HMGB1P9-201ENST00000429856 WDFY3Q8IZQ1 3526 aa0.67□□□□□ -2.3
HMGB1P9-201ENST00000429856 ACACAQ13085 2346 aa0.67□□□□□ -2.3
HMGB1P9-201ENST00000429856 AKAP13Q12802 2813 aa0.67□□□□□ -2.3
HMGB1P9-201ENST00000429856 FAT4Q6V0I7 4981 aa0.66□□□□□ -2.3
HMGB1P9-201ENST00000429856 MXRA5Q9NR99 2828 aa0.66□□□□□ -2.3
HMGB1P9-201ENST00000429856 MUC16Q8WXI7 14507 aa0.66□□□□□ -2.3
HMGB1P9-201ENST00000429856 TGP01266 2768 aa0.66□□□□□ -2.3
HMGB1P9-201ENST00000429856 TENM2Q9NT68 2774 aa0.66□□□□□ -2.3
HMGB1P9-201ENST00000429856 WNK1Q9H4A3 2382 aa0.66□□□□□ -2.3
HMGB1P9-201ENST00000429856 FXYD6-FXYD2A0A087WZ82 144 aa0.66□□□□□ -2.3
HMGB1P9-201ENST00000429856 UMAD1C9J7I0 102 aa0.66□□□□□ -2.3
HMGB1P9-201ENST00000429856 K7EQZ3 153 aa0.66□□□□□ -2.3
HMGB1P9-201ENST00000429856 IFI27P40305 119 aaPredicted RBP0.66□□□□□ -2.3
HMGB1P9-201ENST00000429856 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP0.66□□□□□ -2.3
HMGB1P9-201ENST00000429856 SPTBN1Q01082 2364 aaKnown RBP0.65□□□□□ -2.3
Retrieved 100 of 20,778 RNA–protein pairs in 68.7 ms