RNA–Protein interactions for RNA: ENST00000426538.6

GINS3-203, Transcript of GINS complex subunit 3, humanhuman

TSL 1 (best) BASIC

Gene GINS3, Length 1,728 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GINS3-203ENST00000426538 SPRR4Q96PI1 79 aa9.17□□□□□ -0.94
GINS3-203ENST00000426538 PDE6GP18545 87 aa9.15□□□□□ -0.94
GINS3-203ENST00000426538 LOC110117498A0A087WWA1 95 aa9.13□□□□□ -0.95
GINS3-203ENST00000426538 TRBV7-4A0A0J9YYF1 115 aa9.13□□□□□ -0.95
GINS3-203ENST00000426538 CCKP06307 115 aa9.12□□□□□ -0.95
GINS3-203ENST00000426538 LINC00483Q53H64 154 aa9.12□□□□□ -0.95
GINS3-203ENST00000426538 Q6ZQT0 140 aa9.11□□□□□ -0.95
GINS3-203ENST00000426538 VPS13BQ7Z7G8 4022 aa9.11□□□□□ -0.95
GINS3-203ENST00000426538 APOBP04114 4563 aaKnown RBP9.1□□□□□ -0.95
GINS3-203ENST00000426538 CDK2AP2O75956 126 aa9.1□□□□□ -0.95
GINS3-203ENST00000426538 ACYP1P07311 99 aa9.1□□□□□ -0.95
GINS3-203ENST00000426538 C21orf62-AS1Q17RA5 79 aa9.1□□□□□ -0.95
GINS3-203ENST00000426538 VPS25Q9BRG1 176 aa9.09□□□□□ -0.95
GINS3-203ENST00000426538 FAM240AA0A1B0GVK7 77 aa9.08□□□□□ -0.96
GINS3-203ENST00000426538 IGLV8-61A0A075B6I0 122 aa9.07□□□□□ -0.96
GINS3-203ENST00000426538 IGLV9-49A0A0B4J1Y8 123 aa9.07□□□□□ -0.96
GINS3-203ENST00000426538 FAM229AH3BQW9 127 aa9.07□□□□□ -0.96
GINS3-203ENST00000426538 ANAPC11Q9NYG5 84 aa9.07□□□□□ -0.96
GINS3-203ENST00000426538 SPINK6Q6UWN8 80 aa9.06□□□□□ -0.96
GINS3-203ENST00000426538 C9orf153Q5TBE3 101 aa9.05□□□□□ -0.96
GINS3-203ENST00000426538 Q6JHZ5 121 aa9.05□□□□□ -0.96
GINS3-203ENST00000426538 PLA2G1BP04054 148 aaKnown RBP9.04□□□□□ -0.96
GINS3-203ENST00000426538 IGFL1Q6UW32 110 aa9.04□□□□□ -0.96
GINS3-203ENST00000426538 A0A0G2JQZ4 141 aa9□□□□□ -0.97
GINS3-203ENST00000426538 MOBPQ13875 183 aa9□□□□□ -0.97
GINS3-203ENST00000426538 Q8NBF4 154 aa9□□□□□ -0.97
GINS3-203ENST00000426538 LINC00846Q9NV44 126 aa9□□□□□ -0.97
GINS3-203ENST00000426538 A0A1B0GW54 56 aa9□□□□□ -0.97
GINS3-203ENST00000426538 A0A1W2PNM2 257 aa9□□□□□ -0.97
GINS3-203ENST00000426538 KRTAP10-4P60372 401 aaPredicted RBP9□□□□□ -0.97
GINS3-203ENST00000426538 FAM229BQ4G0N7 80 aa9□□□□□ -0.97
GINS3-203ENST00000426538 CDIP1Q9H305 208 aa8.99□□□□□ -0.97
GINS3-203ENST00000426538 FAT1Q14517 4588 aa8.98□□□□□ -0.97
GINS3-203ENST00000426538 KRTAP1-4P0C5Y4 121 aa8.97□□□□□ -0.97
GINS3-203ENST00000426538 CRYGAP11844 174 aa8.97□□□□□ -0.97
GINS3-203ENST00000426538 UBL5Q9BZL1 73 aa8.97□□□□□ -0.97
GINS3-203ENST00000426538 Q5VSD8 79 aa8.97□□□□□ -0.97
GINS3-203ENST00000426538 SSBP3-AS1Q7Z2R9 100 aa8.96□□□□□ -0.98
GINS3-203ENST00000426538 A0A087X002 238 aa8.95□□□□□ -0.98
GINS3-203ENST00000426538 EPPK1P58107 5090 aaKnown RBP8.94□□□□□ -0.98
GINS3-203ENST00000426538 Q6Q795 121 aa8.94□□□□□ -0.98
GINS3-203ENST00000426538 HSPG2P98160 4391 aa8.92□□□□□ -0.98
GINS3-203ENST00000426538 LINC00643Q86TS7 51 aa8.92□□□□□ -0.98
GINS3-203ENST00000426538 NREPQ16612 68 aa8.91□□□□□ -0.98
GINS3-203ENST00000426538 KRTAP13-2Q52LG2 175 aa8.91□□□□□ -0.98
GINS3-203ENST00000426538 A0A087WSZ3 146 aa8.91□□□□□ -0.98
GINS3-203ENST00000426538 HRCT1Q6UXD1 115 aa8.91□□□□□ -0.98
GINS3-203ENST00000426538 Q6ZVQ6 151 aa8.9□□□□□ -0.98
GINS3-203ENST00000426538 Q8N1X5 172 aa8.89□□□□□ -0.99
GINS3-203ENST00000426538 TYMSOSQ8TAI1 123 aa8.89□□□□□ -0.99
GINS3-203ENST00000426538 SIGMAR1Q99720 223 aa8.89□□□□□ -0.99
GINS3-203ENST00000426538 RYR1P21817 5038 aa8.89□□□□□ -0.99
GINS3-203ENST00000426538 TRBV7-7A0A0K0K1E9 115 aa8.88□□□□□ -0.99
GINS3-203ENST00000426538 CD164Q04900 197 aa8.86□□□□□ -0.99
GINS3-203ENST00000426538 PRR26Q8N8Z3 221 aa8.86□□□□□ -0.99
GINS3-203ENST00000426538 MT-ATP8P03928 68 aa8.85□□□□□ -0.99
GINS3-203ENST00000426538 KIAA1109Q2LD37 5005 aa8.84□□□□□ -0.99
GINS3-203ENST00000426538 IGKV3D-7A0A0C4DH55 119 aa8.83□□□□□ -1
GINS3-203ENST00000426538 C4orf48Q5BLP8 95 aa8.83□□□□□ -1
GINS3-203ENST00000426538 SS18L2Q9UHA2 77 aa8.83□□□□□ -1
GINS3-203ENST00000426538 ATP5EP2Q5VTU8 51 aa8.83□□□□□ -1
GINS3-203ENST00000426538 KRTAP17-1Q9BYP8 105 aa8.82□□□□□ -1
GINS3-203ENST00000426538 BPY2O14599 106 aa8.8□□□□□ -1
GINS3-203ENST00000426538 CXCL6P80162 114 aa8.8□□□□□ -1
GINS3-203ENST00000426538 IMUPQ9GZP8 106 aa8.77□□□□□ -1
GINS3-203ENST00000426538 SPINK1P00995 79 aa8.77□□□□□ -1.01
GINS3-203ENST00000426538 DEFB116Q30KQ4 102 aa8.77□□□□□ -1.01
GINS3-203ENST00000426538 SPAG11AQ6PDA7 123 aa8.77□□□□□ -1.01
GINS3-203ENST00000426538 LINC00304Q8N9R0 145 aa8.77□□□□□ -1.01
GINS3-203ENST00000426538 PKHD1L1Q86WI1 4243 aa8.76□□□□□ -1.01
GINS3-203ENST00000426538 HIST1H4AP62805 103 aaKnown RBP8.75□□□□□ -1.01
GINS3-203ENST00000426538 LINC00472Q9H8W2 130 aa8.75□□□□□ -1.01
GINS3-203ENST00000426538 LIMD2Q9BT23 127 aa8.74□□□□□ -1.01
GINS3-203ENST00000426538 J3KT08 172 aa8.72□□□□□ -1.01
GINS3-203ENST00000426538 Q5XG85 94 aa8.72□□□□□ -1.01
GINS3-203ENST00000426538 ASB16-AS1Q495Z4 193 aa8.71□□□□□ -1.02
GINS3-203ENST00000426538 IGKV4-1P06312 121 aa8.7□□□□□ -1.02
GINS3-203ENST00000426538 DSCR10P59022 87 aa8.7□□□□□ -1.02
GINS3-203ENST00000426538 Q96NJ1 140 aa8.7□□□□□ -1.02
GINS3-203ENST00000426538 RPS29P62273 56 aaKnown RBP8.69□□□□□ -1.02
GINS3-203ENST00000426538 Q8N9L7 120 aa8.68□□□□□ -1.02
GINS3-203ENST00000426538 KRTAP10-8P60410 259 aa8.68□□□□□ -1.02
GINS3-203ENST00000426538 A0A087WVE0 104 aa8.67□□□□□ -1.02
GINS3-203ENST00000426538 NDUFB1O75438 58 aa8.67□□□□□ -1.02
GINS3-203ENST00000426538 A8MWP4 228 aa8.66□□□□□ -1.02
GINS3-203ENST00000426538 K7EQZ3 153 aa8.66□□□□□ -1.02
GINS3-203ENST00000426538 KRTAP4-5Q9BYR2 181 aa8.66□□□□□ -1.02
GINS3-203ENST00000426538 LRP1Q07954 4544 aaKnown RBP8.64□□□□□ -1.03
GINS3-203ENST00000426538 C1orf195Q5TG92 126 aa8.64□□□□□ -1.03
GINS3-203ENST00000426538 BIRC6Q9NR09 4857 aa8.64□□□□□ -1.03
GINS3-203ENST00000426538 FLG2Q5D862 2391 aaPredicted RBP8.63□□□□□ -1.03
GINS3-203ENST00000426538 SCGB1A1P11684 91 aa8.63□□□□□ -1.03
GINS3-203ENST00000426538 PRR15Q8IV56 129 aa8.63□□□□□ -1.03
GINS3-203ENST00000426538 OXTP01178 125 aa8.62□□□□□ -1.03
GINS3-203ENST00000426538 FAM236AA0A1B0GUQ0 79 aa8.61□□□□□ -1.03
GINS3-203ENST00000426538 FAM236BA0A1B0GV22 79 aa8.61□□□□□ -1.03
GINS3-203ENST00000426538 FAT3Q8TDW7 4589 aa8.59□□□□□ -1.03
GINS3-203ENST00000426538 TNXBP22105 4242 aa8.58□□□□□ -1.04
GINS3-203ENST00000426538 IGHV6-1A0A0B4J1U7 121 aa8.57□□□□□ -1.04
GINS3-203ENST00000426538 A0A1B0GVX0 72 aa8.57□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 67.7 ms