RNA–Protein interactions for RNA: ENST00000426431.2

SP1-202, Transcript of Sp1 transcription factor, humanhuman

TSL 1 (best) BASIC

Gene SP1, Length 7,603 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SP1-202ENST00000426431 SETXQ7Z333 2677 aaKnown RBP6.17□□□□□ -1.42
SP1-202ENST00000426431 HRES1P13985 223 aa6.16□□□□□ -1.42
SP1-202ENST00000426431 KRTAP10-1P60331 282 aa6.15□□□□□ -1.42
SP1-202ENST00000426431 RPS29P62273 56 aaKnown RBP6.15□□□□□ -1.43
SP1-202ENST00000426431 Q1T7F1 81 aa6.14□□□□□ -1.43
SP1-202ENST00000426431 SPINT4Q6UDR6 99 aa6.14□□□□□ -1.43
SP1-202ENST00000426431 Q8NDZ9 215 aa6.13□□□□□ -1.43
SP1-202ENST00000426431 CEP350Q5VT06 3117 aa6.13□□□□□ -1.43
SP1-202ENST00000426431 AKAP13Q12802 2813 aa6.13□□□□□ -1.43
SP1-202ENST00000426431 CHD6Q8TD26 2715 aa6.12□□□□□ -1.43
SP1-202ENST00000426431 M0R2T5 61 aa6.11□□□□□ -1.43
SP1-202ENST00000426431 S4R3F8 94 aa6.11□□□□□ -1.43
SP1-202ENST00000426431 NBEAL1Q6ZS30 2694 aa6.1□□□□□ -1.43
SP1-202ENST00000426431 A0A1B0GU33 70 aa6.1□□□□□ -1.43
SP1-202ENST00000426431 HTTP42858 3142 aa6.1□□□□□ -1.43
SP1-202ENST00000426431 KRTAP10-2P60368 255 aa6.1□□□□□ -1.43
SP1-202ENST00000426431 KRTAP4-16G5E9R7 235 aaPredicted RBP6.09□□□□□ -1.43
SP1-202ENST00000426431 ASB16-AS1Q495Z4 193 aa6.09□□□□□ -1.43
SP1-202ENST00000426431 DMAC1Q96GE9 116 aa6.09□□□□□ -1.44
SP1-202ENST00000426431 Q5W150 140 aa6.08□□□□□ -1.44
SP1-202ENST00000426431 NSD1Q96L73 2696 aaPredicted RBP6.08□□□□□ -1.44
SP1-202ENST00000426431 NOTCH1P46531 2555 aa6.08□□□□□ -1.44
SP1-202ENST00000426431 SPINK7P58062 85 aa6.08□□□□□ -1.44
SP1-202ENST00000426431 LINC01554Q52M75 96 aa6.07□□□□□ -1.44
SP1-202ENST00000426431 ITPR2Q14571 2701 aa6.06□□□□□ -1.44
SP1-202ENST00000426431 MGAQ8IWI9 3026 aa6.06□□□□□ -1.44
SP1-202ENST00000426431 CAMK2N1Q7Z7J9 78 aa6.06□□□□□ -1.44
SP1-202ENST00000426431 LINC01558Q9Y6Z2 57 aa6.05□□□□□ -1.44
SP1-202ENST00000426431 Q75L30 129 aa6.05□□□□□ -1.44
SP1-202ENST00000426431 GCN1Q92616 2671 aaKnown RBP6.05□□□□□ -1.44
SP1-202ENST00000426431 KTN1-AS1Q86SY8 53 aa6.04□□□□□ -1.44
SP1-202ENST00000426431 A0A0D9SG42 100 aa6.03□□□□□ -1.44
SP1-202ENST00000426431 Q6ZRN7 208 aaPredicted RBP6.03□□□□□ -1.44
SP1-202ENST00000426431 C5orf42Q9H799 3197 aa6.02□□□□□ -1.45
SP1-202ENST00000426431 LCA10Q71F78 164 aa6.02□□□□□ -1.45
SP1-202ENST00000426431 Q5XG85 94 aa6.01□□□□□ -1.45
SP1-202ENST00000426431 Q8N9P0 234 aaPredicted RBP6.01□□□□□ -1.45
SP1-202ENST00000426431 DSPP15924 2871 aaKnown RBP6□□□□□ -1.45
SP1-202ENST00000426431 MAP1AP78559 2803 aaPredicted RBP5.98□□□□□ -1.45
SP1-202ENST00000426431 RANBP2P49792 3224 aaKnown RBP5.97□□□□□ -1.45
SP1-202ENST00000426431 R4GN34 69 aa5.96□□□□□ -1.45
SP1-202ENST00000426431 UBR5O95071 2799 aaPredicted RBP5.96□□□□□ -1.46
SP1-202ENST00000426431 UTRNP46939 3433 aa5.94□□□□□ -1.46
SP1-202ENST00000426431 PANO1I0J062 215 aa5.94□□□□□ -1.46
SP1-202ENST00000426431 LUZP6Q538Z0 58 aa5.94□□□□□ -1.46
SP1-202ENST00000426431 FLG2Q5D862 2391 aaPredicted RBP5.94□□□□□ -1.46
SP1-202ENST00000426431 KRTAP29-1A8MX34 341 aaPredicted RBP5.92□□□□□ -1.46
SP1-202ENST00000426431 A0A087X002 238 aa5.91□□□□□ -1.46
SP1-202ENST00000426431 STAB2Q8WWQ8 2551 aa5.9□□□□□ -1.46
SP1-202ENST00000426431 KRTAP13-1Q8IUC0 172 aa5.88□□□□□ -1.47
SP1-202ENST00000426431 FLNCQ14315 2725 aa5.87□□□□□ -1.47
SP1-202ENST00000426431 ITPR1Q14643 2758 aa5.87□□□□□ -1.47
SP1-202ENST00000426431 RPL37P61927 97 aaKnown RBP5.86□□□□□ -1.47
SP1-202ENST00000426431 H1FX-AS1Q4G0G2 97 aa5.84□□□□□ -1.47
SP1-202ENST00000426431 HIVEP1P15822 2718 aa5.83□□□□□ -1.48
SP1-202ENST00000426431 DMBT1Q9UGM3 2413 aaPredicted RBP5.82□□□□□ -1.48
SP1-202ENST00000426431 NBEAL2Q6ZNJ1 2754 aa5.81□□□□□ -1.48
SP1-202ENST00000426431 PLAC4Q8WY50 150 aa5.81□□□□□ -1.48
SP1-202ENST00000426431 M0QZ58 72 aa5.8□□□□□ -1.48
SP1-202ENST00000426431 Q5VV11 94 aa5.8□□□□□ -1.48
SP1-202ENST00000426431 KRTAP7-1Q8IUC3 87 aa5.78□□□□□ -1.48
SP1-202ENST00000426431 WDFY4Q6ZS81 3184 aa5.78□□□□□ -1.48
SP1-202ENST00000426431 A0A0C4DFX4 3053 aa5.78□□□□□ -1.48
SP1-202ENST00000426431 KRTAP13-2Q52LG2 175 aa5.77□□□□□ -1.49
SP1-202ENST00000426431 KRTAP11-1Q8IUC1 163 aa5.77□□□□□ -1.49
SP1-202ENST00000426431 CFAP54Q96N23 3096 aa5.76□□□□□ -1.49
SP1-202ENST00000426431 ROMO1P60602 79 aa5.76□□□□□ -1.49
SP1-202ENST00000426431 NIPBLQ6KC79 2804 aaeCLIP5.75□□□□□ -1.49
SP1-202ENST00000426431 LAMA3Q16787 3333 aa5.75□□□□□ -1.49
SP1-202ENST00000426431 NOTCH2NLQ7Z3S9 236 aa5.74□□□□□ -1.49
SP1-202ENST00000426431 PRUNE2Q8WUY3 3088 aa5.74□□□□□ -1.49
SP1-202ENST00000426431 ADM2Q7Z4H4 148 aa5.74□□□□□ -1.49
SP1-202ENST00000426431 UTP20O75691 2785 aaKnown RBP5.74□□□□□ -1.49
SP1-202ENST00000426431 APCP25054 2843 aa5.72□□□□□ -1.49
SP1-202ENST00000426431 CYSTM1Q9H1C7 97 aa5.71□□□□□ -1.5
SP1-202ENST00000426431 A8MUU9 505 aa5.71□□□□□ -1.5
SP1-202ENST00000426431 C20orf166-AS1Q96NR2 134 aa5.69□□□□□ -1.5
SP1-202ENST00000426431 PCNTO95613 3336 aa5.69□□□□□ -1.5
SP1-202ENST00000426431 TENM4Q6N022 2769 aa5.68□□□□□ -1.5
SP1-202ENST00000426431 MKI67P46013 3256 aaKnown RBP5.66□□□□□ -1.5
SP1-202ENST00000426431 SPATA8Q6RVD6 105 aa5.66□□□□□ -1.5
SP1-202ENST00000426431 FRYQ5TBA9 3013 aa5.65□□□□□ -1.51
SP1-202ENST00000426431 VPS13AQ96RL7 3174 aa5.62□□□□□ -1.51
SP1-202ENST00000426431 LAMA2P24043 3122 aaKnown RBP5.61□□□□□ -1.51
SP1-202ENST00000426431 TRIOO75962 3097 aa5.6□□□□□ -1.51
SP1-202ENST00000426431 FRYLO94915 3013 aa5.6□□□□□ -1.51
SP1-202ENST00000426431 LRBAP50851 2863 aa5.59□□□□□ -1.51
SP1-202ENST00000426431 TPRXLQ17RH7 258 aa5.58□□□□□ -1.52
SP1-202ENST00000426431 KRTAP1-4P0C5Y4 121 aa5.58□□□□□ -1.52
SP1-202ENST00000426431 ATMQ13315 3056 aa5.57□□□□□ -1.52
SP1-202ENST00000426431 A0A0A0MQY5 61 aa5.57□□□□□ -1.52
SP1-202ENST00000426431 COL12A1Q99715 3063 aa5.57□□□□□ -1.52
SP1-202ENST00000426431 TACC2O95359 2948 aa5.54□□□□□ -1.52
SP1-202ENST00000426431 TNRC18O15417 2968 aaPredicted RBP5.52□□□□□ -1.53
SP1-202ENST00000426431 XP32Q5T750 250 aa5.51□□□□□ -1.53
SP1-202ENST00000426431 PRAC1Q96KF2 57 aa5.51□□□□□ -1.53
SP1-202ENST00000426431 BRCA2P51587 3418 aa5.5□□□□□ -1.53
SP1-202ENST00000426431 DMXL2Q8TDJ6 3036 aa5.49□□□□□ -1.53
SP1-202ENST00000426431 ZZEF1O43149 2961 aa5.49□□□□□ -1.53
SP1-202ENST00000426431 NBEAQ8NFP9 2946 aa5.47□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 9.1 ms